RNA–Protein interactions for RNA: ENST00000542328.5

ABCB8-222, Transcript of ATP binding cassette subfamily B member 8, human

TSL 2 BASIC

Gene ABCB8, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB8-222	ENST00000542328	TRIM66	O15016	1216 aa		12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	XYLB	O75191	536 aa		12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	C4BPA	P04003	597 aa	Known RBP	12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	KPNA1	P52294	538 aa	Predicted RBP	12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	PDIA2	Q13087	525 aa	Known RBP	12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	SLC10A6	Q3KNW5	377 aa		12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	CDCA2	Q69YH5	1023 aa	Predicted RBP	12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	HSFY1	Q96LI6	401 aa		12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	CARD9	Q9H257	536 aa		12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	UXT	Q9UBK9	157 aa	Predicted RBP	12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	RRP15	Q9Y3B9	282 aa	Known RBP	12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	STK25	O00506	426 aa		12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	GPC4	O75487	556 aa		12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	PROSC	O94903	275 aa		12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	CCDC130	P13994	396 aa		12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	YWHAZ	P63104	245 aa	Known RBP	12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	NAA25	Q14CX7	972 aa		12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	CCDC149	Q6ZUS6	474 aa		12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	ZBED8	Q8IZ13	594 aa		12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	C1orf127	Q8N9H9	656 aa		12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	GANC	Q8TET4	914 aa		12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	FAM172A	Q8WUF8	416 aa		12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	AVEN	Q9NQS1	362 aa	Predicted RBP	12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	SLC12A8	A0AV02	714 aa		12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	CFAP69	A5D8W1	941 aa		12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	CTIF	O43310	598 aa	Known RBP	12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	PSTPIP1	O43586	416 aa		12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	EFEMP1	Q12805	493 aa		12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	BIRC2	Q13490	618 aa		12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	PSMD5	Q16401	504 aa		12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	PID1	Q7Z2X4	250 aa		12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	FSD1L	Q9BXM9	530 aa		12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	GOLGA2P5	Q9HBQ8	144 aa		12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	TMEM51	Q9NW97	253 aa		12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	COL4A1	P02462	1669 aa		12.89	□□□□□ -0.35
ABCB8-222	ENST00000542328	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	MYL4	P12829	197 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	KCNJ1	P48048	391 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	SMTNL2	Q2TAL5	461 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	ACCSL	Q4AC99	568 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	PPM1L	Q5SGD2	360 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	EMC1	Q8N766	993 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	ELAC2	Q9BQ52	826 aa	Known RBP	12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	MINDY3	Q9H8M7	445 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	OLA1	Q9NTK5	396 aa	Known RBP	12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	ADGRA3	Q8IWK6	1321 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	DOCK2	Q92608	1830 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	NT5C1B-RDH14	C9J2C7	533 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	RAD51C	O43502	376 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	EPHB2	P29323	1055 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	ADSS	P30520	456 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	AVPR1A	P37288	418 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	ASPH	Q12797	758 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	RCN2	Q14257	317 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	ANO4	Q32M45	955 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	PSRC1	Q6PGN9	363 aa	Predicted RBP	12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	DDX42	Q86XP3	938 aa	Known RBP eCLIP	12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	ECHDC2	Q86YB7	292 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	RSPH1	Q8WYR4	309 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	SEMA4D	Q92854	862 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	IFT43	Q96FT9	208 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	FAM84A	Q96KN4	292 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	TTC25	Q96NG3	672 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	RAB3IP	Q96QF0	476 aa	Predicted RBP	12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	TTPAL	Q9BTX7	342 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	CST8	O60676	142 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	ADH1A	P07327	375 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	NPR3	P17342	541 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	CARS	P49589	748 aa	Known RBP	12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	TPD52	P55327	224 aa	Predicted RBP	12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	SERINC5	Q86VE9	423 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	PPM1N	Q8N819	430 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	SKA2	Q8WVK7	121 aa	Predicted RBP	12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	ARL5C	A6NH57	179 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	PHF2	O75151	1096 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	HSPA1A	P0DMV8	641 aa	Known RBP	12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	HSPA1B	P0DMV9	641 aa	Known RBP	12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	CKB	P12277	381 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	BRAF	P15056	766 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	PDK1	Q15118	436 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	TRIM60	Q495X7	471 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	FAM47E	Q6ZV65	393 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	ATPAF2	Q8N5M1	289 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	ANKRD52	Q8NB46	1076 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	TTC17	Q96AE7	1141 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	ZSWIM1	Q9BR11	485 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	FLRT1	Q9NZU1	646 aa		12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	GNE	Q9Y223	722 aa	Known RBP	12.88	□□□□□ -0.35
ABCB8-222	ENST00000542328	ANKRD65	E5RJM6	399 aa		12.87	□□□□□ -0.35
ABCB8-222	ENST00000542328	EPHB6	O15197	1021 aa		12.87	□□□□□ -0.35
ABCB8-222	ENST00000542328	FPGS	Q05932	587 aa		12.87	□□□□□ -0.35
ABCB8-222	ENST00000542328	TSNAXIP1	Q2TAA8	658 aa		12.87	□□□□□ -0.35
ABCB8-222	ENST00000542328	SLFN11	Q7Z7L1	901 aa		12.87	□□□□□ -0.35
ABCB8-222	ENST00000542328	CFAP61	Q8NHU2	1237 aa		12.87	□□□□□ -0.35
ABCB8-222	ENST00000542328	ANKRD7	Q92527	254 aa		12.87	□□□□□ -0.35
ABCB8-222	ENST00000542328	BAP1	Q92560	729 aa		12.87	□□□□□ -0.35
ABCB8-222	ENST00000542328	KLHL29	Q96CT2	875 aa		12.87	□□□□□ -0.35
ABCB8-222	ENST00000542328	THOC1	Q96FV9	657 aa	Known RBP	12.87	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms