RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 NDST1P52848 882 aa16.57■□□□□ 0.24
VPS33A-206ENST00000542310 IFRD2Q12894 506 aaPredicted RBP16.57■□□□□ 0.24
VPS33A-206ENST00000542310 LPAL2Q16609 132 aa16.57■□□□□ 0.24
VPS33A-206ENST00000542310 RSPO4Q2I0M5 234 aaPredicted RBP16.57■□□□□ 0.24
VPS33A-206ENST00000542310 NAIF1Q69YI7 327 aaPredicted RBP16.57■□□□□ 0.24
VPS33A-206ENST00000542310 CEP68Q76N32 757 aa16.57■□□□□ 0.24
VPS33A-206ENST00000542310 FILIP1Q7Z7B0 1213 aa16.57■□□□□ 0.24
VPS33A-206ENST00000542310 ACOT1Q86TX2 421 aa16.57■□□□□ 0.24
VPS33A-206ENST00000542310 FAM186BQ8IYM0 893 aa16.57■□□□□ 0.24
VPS33A-206ENST00000542310 RPLP0P6Q8NHW5 317 aa16.57■□□□□ 0.24
VPS33A-206ENST00000542310 EZH1Q92800 747 aaPredicted RBP16.57■□□□□ 0.24
VPS33A-206ENST00000542310 OTUB2Q96DC9 234 aa16.57■□□□□ 0.24
VPS33A-206ENST00000542310 FAXDC2Q96IV6 333 aa16.57■□□□□ 0.24
VPS33A-206ENST00000542310 LOXL4Q96JB6 756 aa16.57■□□□□ 0.24
VPS33A-206ENST00000542310 KCNK16Q96T55 309 aa16.57■□□□□ 0.24
VPS33A-206ENST00000542310 FBXO44Q9H4M3 255 aa16.57■□□□□ 0.24
VPS33A-206ENST00000542310 CYP3A43Q9HB55 503 aa16.57■□□□□ 0.24
VPS33A-206ENST00000542310 PNPLA8Q9NP80 782 aa16.57■□□□□ 0.24
VPS33A-206ENST00000542310 PARD6AQ9NPB6 346 aa16.57■□□□□ 0.24
VPS33A-206ENST00000542310 TBC1D14Q9P2M4 693 aa16.57■□□□□ 0.24
VPS33A-206ENST00000542310 HMGXB4Q9UGU5 601 aa16.57■□□□□ 0.24
VPS33A-206ENST00000542310 MYOFQ9NZM1 2061 aa16.57■□□□□ 0.24
VPS33A-206ENST00000542310 E2F8A0AVK6 867 aa16.56■□□□□ 0.24
VPS33A-206ENST00000542310 RPP40O75818 363 aaKnown RBP16.56■□□□□ 0.24
VPS33A-206ENST00000542310 ADH1CP00326 375 aa16.56■□□□□ 0.24
VPS33A-206ENST00000542310 ABL1P00519 1130 aa16.56■□□□□ 0.24
VPS33A-206ENST00000542310 MBL2P11226 248 aaPredicted RBP16.56■□□□□ 0.24
VPS33A-206ENST00000542310 GTF2H1P32780 548 aa16.56■□□□□ 0.24
VPS33A-206ENST00000542310 PSMC2P35998 433 aaKnown RBP16.56■□□□□ 0.24
VPS33A-206ENST00000542310 OPRD1P41143 372 aa16.56■□□□□ 0.24
VPS33A-206ENST00000542310 SRSF5Q13243 272 aaKnown RBP16.56■□□□□ 0.24
VPS33A-206ENST00000542310 GAB4Q2WGN9 574 aa16.56■□□□□ 0.24
VPS33A-206ENST00000542310 HECTD3Q5T447 861 aa16.56■□□□□ 0.24
VPS33A-206ENST00000542310 ZMIZ2Q8NF64 920 aa16.56■□□□□ 0.24
VPS33A-206ENST00000542310 SLC2A14Q8TDB8 520 aa16.56■□□□□ 0.24
VPS33A-206ENST00000542310 DNAI2Q9GZS0 605 aa16.56■□□□□ 0.24
VPS33A-206ENST00000542310 NIF3L1Q9GZT8 377 aa16.56■□□□□ 0.24
VPS33A-206ENST00000542310 LINC00597Q9H2U6 94 aa16.56■□□□□ 0.24
VPS33A-206ENST00000542310 TMEM8AQ9HCN3 771 aa16.56■□□□□ 0.24
VPS33A-206ENST00000542310 CFAP97Q9P2B7 532 aa16.56■□□□□ 0.24
VPS33A-206ENST00000542310 CDV3Q9UKY7 258 aaKnown RBP16.56■□□□□ 0.24
VPS33A-206ENST00000542310 GTF3C3Q9Y5Q9 886 aa16.56■□□□□ 0.24
VPS33A-206ENST00000542310 COCHO43405 550 aa16.55■□□□□ 0.24
VPS33A-206ENST00000542310 FAM200BP0CF97 657 aa16.55■□□□□ 0.24
VPS33A-206ENST00000542310 TRIM49P0CI25 452 aa16.55■□□□□ 0.24
VPS33A-206ENST00000542310 TRIM49CP0CI26 452 aa16.55■□□□□ 0.24
VPS33A-206ENST00000542310 CCDC130P13994 396 aa16.55■□□□□ 0.24
VPS33A-206ENST00000542310 SPEM2Q0P670 501 aa16.55■□□□□ 0.24
VPS33A-206ENST00000542310 DHCR24Q15392 516 aa16.55■□□□□ 0.24
VPS33A-206ENST00000542310 CSRP2Q16527 193 aa16.55■□□□□ 0.24
VPS33A-206ENST00000542310 COBLL1Q53SF7 1204 aa16.55■□□□□ 0.24
VPS33A-206ENST00000542310 SPOPLQ6IQ16 392 aa16.55■□□□□ 0.24
VPS33A-206ENST00000542310 CACNA2D4Q7Z3S7 1137 aa16.55■□□□□ 0.24
VPS33A-206ENST00000542310 FAM160A2Q8N612 972 aaPredicted RBP16.55■□□□□ 0.24
VPS33A-206ENST00000542310 CCDC150Q8NCX0 1101 aa16.55■□□□□ 0.24
VPS33A-206ENST00000542310 SCAMP5Q8TAC9 235 aa16.55■□□□□ 0.24
VPS33A-206ENST00000542310 ZFRQ96KR1 1074 aaKnown RBP16.55■□□□□ 0.24
VPS33A-206ENST00000542310 SMOQ99835 787 aa16.55■□□□□ 0.24
VPS33A-206ENST00000542310 RTKNQ9BST9 563 aa16.55■□□□□ 0.24
VPS33A-206ENST00000542310 FAM124BQ9H5Z6 455 aaPredicted RBP16.55■□□□□ 0.24
VPS33A-206ENST00000542310 RMND1Q9NWS8 449 aa16.55■□□□□ 0.24
VPS33A-206ENST00000542310 SMPD4Q9NXE4 827 aa16.55■□□□□ 0.24
VPS33A-206ENST00000542310 EBF1Q9UH73 591 aa16.55■□□□□ 0.24
VPS33A-206ENST00000542310 PLXND1Q9Y4D7 1925 aa16.55■□□□□ 0.24
VPS33A-206ENST00000542310 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.54■□□□□ 0.24
VPS33A-206ENST00000542310 APBB3O95704 486 aa16.54■□□□□ 0.24
VPS33A-206ENST00000542310 GCLMP48507 274 aa16.54■□□□□ 0.24
VPS33A-206ENST00000542310 PPP3CAQ08209 521 aa16.54■□□□□ 0.24
VPS33A-206ENST00000542310 ADAM9Q13443 819 aa16.54■□□□□ 0.24
VPS33A-206ENST00000542310 DMC1Q14565 340 aa16.54■□□□□ 0.24
VPS33A-206ENST00000542310 HSF5Q4G112 596 aaPredicted RBP16.54■□□□□ 0.24
VPS33A-206ENST00000542310 KRT39Q6A163 491 aa16.54■□□□□ 0.24
VPS33A-206ENST00000542310 PRR23CQ6ZRP0 262 aa16.54■□□□□ 0.24
VPS33A-206ENST00000542310 ADGRG2Q8IZP9 1017 aa16.54■□□□□ 0.24
VPS33A-206ENST00000542310 TTC39CQ8N584 583 aa16.54■□□□□ 0.24
VPS33A-206ENST00000542310 NETO1Q8TDF5 533 aa16.54■□□□□ 0.24
VPS33A-206ENST00000542310 TAS1R2Q8TE23 839 aa16.54■□□□□ 0.24
VPS33A-206ENST00000542310 USP33Q8TEY7 942 aa16.54■□□□□ 0.24
VPS33A-206ENST00000542310 ELMO3Q96BJ8 720 aa16.54■□□□□ 0.24
VPS33A-206ENST00000542310 HHIPQ96QV1 700 aa16.54■□□□□ 0.24
VPS33A-206ENST00000542310 HNRNPABQ99729 332 aaKnown RBP16.54■□□□□ 0.24
VPS33A-206ENST00000542310 NT5C1AQ9BXI3 368 aa16.54■□□□□ 0.24
VPS33A-206ENST00000542310 APOBEC3GQ9HC16 384 aaKnown RBP16.54■□□□□ 0.24
VPS33A-206ENST00000542310 SEMA4GQ9NTN9 838 aa16.54■□□□□ 0.24
VPS33A-206ENST00000542310 GMIPQ9P107 970 aa16.54■□□□□ 0.24
VPS33A-206ENST00000542310 MAPK8IP1Q9UQF2 711 aa16.54■□□□□ 0.24
VPS33A-206ENST00000542310 PCDHA5Q9Y5H7 936 aa16.54■□□□□ 0.24
VPS33A-206ENST00000542310 AXIN1O15169 862 aa16.53■□□□□ 0.24
VPS33A-206ENST00000542310 STX10O60499 249 aa16.53■□□□□ 0.24
VPS33A-206ENST00000542310 CILPO75339 1184 aa16.53■□□□□ 0.24
VPS33A-206ENST00000542310 EPN2O95208 641 aa16.53■□□□□ 0.24
VPS33A-206ENST00000542310 CCDC192P0DO97 292 aa16.53■□□□□ 0.24
VPS33A-206ENST00000542310 ADH5P11766 374 aa16.53■□□□□ 0.24
VPS33A-206ENST00000542310 MAP3K7CLP57077 242 aa16.53■□□□□ 0.24
VPS33A-206ENST00000542310 BECN1Q14457 450 aa16.53■□□□□ 0.24
VPS33A-206ENST00000542310 CLEC20AQ6ZU45 233 aa16.53■□□□□ 0.24
VPS33A-206ENST00000542310 FMR1NBQ8N0W7 255 aaPredicted RBP16.53■□□□□ 0.24
VPS33A-206ENST00000542310 ZC3H10Q96K80 434 aaKnown RBP16.53■□□□□ 0.24
VPS33A-206ENST00000542310 GTPBP4Q9BZE4 634 aaKnown RBP16.53■□□□□ 0.24
VPS33A-206ENST00000542310 GDPD2Q9HCC8 539 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms