RNA–Protein interactions for RNA: ENST00000541347.5

CX3CR1-205, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene CX3CR1, Length 3,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-205ENST00000541347 CLDN5O00501 218 aa11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 DNALI1O14645 258 aaPredicted RBP11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 XPO1O14980 1071 aaKnown RBP11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 CAND2O75155 1236 aa11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 APOC2P02655 101 aa11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 PECAM1P16284 738 aaPredicted RBP11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 PTPN1P18031 435 aaKnown RBP11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 TFE3P19532 575 aaPredicted RBP11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 ACADSBP45954 432 aa11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 GPS1Q13098 491 aa11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 ITGA7Q13683 1181 aa11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 LPIN1Q14693 890 aa11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 LEKR1Q6ZMV7 388 aa11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 SLC26A9Q7LBE3 791 aa11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 CAPNS2Q96L46 248 aa11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 C11orf84Q9BUA3 381 aaPredicted RBP11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 SRRDQ9UH36 339 aa11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 HPDP32754 393 aaPredicted RBP11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 SCNN1AP37088 669 aa11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 GDF10P55107 478 aa11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 HDAC4P56524 1084 aa11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 GNGT1P63211 74 aa11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 BOLA3Q53S33 107 aa11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 ZC3H12AQ5D1E8 599 aaKnown RBP11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 LRRC31Q6UY01 552 aa11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 PAQR9Q6ZVX9 377 aa11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 C3orf58Q8NDZ4 430 aa11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 MAK16Q9BXY0 300 aaKnown RBP11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 DUSP16Q9BY84 665 aa11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 PCDH9Q9HC56 1237 aa11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 DDX20Q9UHI6 824 aaKnown RBP11.25□□□□□ -0.61
CX3CR1-205ENST00000541347 THSD7BQ9C0I4 1608 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 ACSL3O95573 720 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 PTPN9P43378 593 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 PTK7Q13308 1070 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 KRT81Q14533 505 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 DSC3Q14574 896 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 TRIM71Q2Q1W2 868 aaKnown RBP11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 MAP3K21Q5TCX8 1036 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 ARCQ7LC44 396 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 PIGZQ86VD9 579 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 ZCCHC9Q8N567 271 aaKnown RBP11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 TEKT4Q8WW24 435 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 TLCD1Q96CP7 247 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 PAAF1Q9BRP4 392 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 TMEM109Q9BVC6 243 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 ADAM33Q9BZ11 813 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 GPATCH2LQ9NWQ4 482 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 DDX43Q9NXZ2 648 aaKnown RBP11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 TPX2Q9ULW0 747 aaKnown RBP11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 CASTOR2A6NHX0 329 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 ZNF623O75123 536 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 BEST1O76090 585 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 TTC4O95801 387 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 IFNB1P01574 187 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 DESP17661 470 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 IL4RP24394 825 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 CDR1P51861 262 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 ACLYP53396 1101 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 MAGOHP61326 146 aaKnown RBP11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 PDK2Q15119 407 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 DEFB115Q30KQ5 88 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 MDH1BQ5I0G3 518 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 RNF180Q86T96 592 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 RNF169Q8NCN4 708 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 CD99L2Q8TCZ2 262 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 PGM2Q96G03 612 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 SNRNP25Q9BV90 132 aaKnown RBP11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 NOD1Q9Y239 953 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 TIMM13Q9Y5L4 95 aaPredicted RBP11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 TLDC2A0PJX2 215 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 SMIM23A6NLE4 172 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 NPR3P17342 541 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 RAB27AP51159 221 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 CA9Q16790 459 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 UPP1Q16831 310 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 NPNTQ6UXI9 565 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 DSTYKQ6XUX3 929 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 RELL1Q8IUW5 271 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 MAP7D3Q8IWC1 876 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 EPS8L3Q8TE67 593 aaKnown RBP11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 CENPIQ92674 756 aaPredicted RBP11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 RNF157Q96PX1 679 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 TBCBQ99426 244 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 PCDH18Q9HCL0 1135 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 CRTAC1Q9NQ79 661 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 NINJ2Q9NZG7 142 aa11.24□□□□□ -0.61
CX3CR1-205ENST00000541347 A0A0U1RQF3 1178 aa11.23□□□□□ -0.61
CX3CR1-205ENST00000541347 A6NNZ2 444 aa11.23□□□□□ -0.61
CX3CR1-205ENST00000541347 CAPN15O75808 1086 aa11.23□□□□□ -0.61
CX3CR1-205ENST00000541347 IBSPP21815 317 aaPredicted RBP11.23□□□□□ -0.61
CX3CR1-205ENST00000541347 RPL9P32969 192 aaKnown RBP11.23□□□□□ -0.61
CX3CR1-205ENST00000541347 ATXN1P54253 815 aaKnown RBP11.23□□□□□ -0.61
CX3CR1-205ENST00000541347 EIF3EP60228 445 aaKnown RBP11.23□□□□□ -0.61
CX3CR1-205ENST00000541347 KYNUQ16719 465 aa11.23□□□□□ -0.61
CX3CR1-205ENST00000541347 TUBB8Q3ZCM7 444 aa11.23□□□□□ -0.61
CX3CR1-205ENST00000541347 FAM26DQ5JW98 314 aa11.23□□□□□ -0.61
CX3CR1-205ENST00000541347 RNASEH2BQ5TBB1 312 aaKnown RBP11.23□□□□□ -0.61
CX3CR1-205ENST00000541347 TMEM86AQ8N2M4 240 aa11.23□□□□□ -0.61
CX3CR1-205ENST00000541347 NDRG1Q92597 394 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms