RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 CDK7P50613 346 aa16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 CLNS1AP54105 237 aaKnown RBP16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 SLC29A2Q14542 456 aa16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 FAM133BQ5BKY9 247 aaKnown RBP16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 SEL1L2Q5TEA6 688 aa16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 FAM126BQ8IXS8 530 aa16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 CCDC63Q8NA47 563 aa16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 LINC01599Q8WXQ3 324 aa16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 PGBD4Q96DM1 585 aa16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 PGM2Q96G03 612 aa16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 SENP8Q96LD8 212 aa16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 IP6K2Q9UHH9 426 aa16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 SLC12A4Q9UP95 1085 aa16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 SQORQ9Y6N5 450 aa16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 SCN5AQ14524 2016 aa16.01■□□□□ 0.15
CLPTM1-202ENST00000541297 RGS16O15492 202 aaPredicted RBP16■□□□□ 0.15
CLPTM1-202ENST00000541297 PMF1Q6P1K2 205 aa16■□□□□ 0.15
CLPTM1-202ENST00000541297 TBC1D1Q86TI0 1168 aaPredicted RBP16■□□□□ 0.15
CLPTM1-202ENST00000541297 PIWIL1Q96J94 861 aaKnown RBP16■□□□□ 0.15
CLPTM1-202ENST00000541297 INTS9Q9NV88 658 aaKnown RBP16■□□□□ 0.15
CLPTM1-202ENST00000541297 KLHL11Q9NVR0 708 aa16■□□□□ 0.15
CLPTM1-202ENST00000541297 HESX1Q9UBX0 185 aa16■□□□□ 0.15
CLPTM1-202ENST00000541297 TCRBV7S2A1N4TA0A589 114 aa16■□□□□ 0.15
CLPTM1-202ENST00000541297 UPP1Q16831 310 aa16■□□□□ 0.15
CLPTM1-202ENST00000541297 SMYD5Q6GMV2 418 aa16■□□□□ 0.15
CLPTM1-202ENST00000541297 ZDHHC24Q6UX98 284 aa16■□□□□ 0.15
CLPTM1-202ENST00000541297 DSTYKQ6XUX3 929 aa16■□□□□ 0.15
CLPTM1-202ENST00000541297 JAMLQ86YT9 394 aa16■□□□□ 0.15
CLPTM1-202ENST00000541297 TOP6BLQ8N6T0 577 aa16■□□□□ 0.15
CLPTM1-202ENST00000541297 SLC2A14Q8TDB8 520 aa16■□□□□ 0.15
CLPTM1-202ENST00000541297 RGS18Q9NS28 235 aa16■□□□□ 0.15
CLPTM1-202ENST00000541297 VIMP08670 466 aaKnown RBP15.99■□□□□ 0.15
CLPTM1-202ENST00000541297 ITIH4Q14624 930 aa15.99■□□□□ 0.15
CLPTM1-202ENST00000541297 FAM102AQ5T9C2 384 aaPredicted RBP15.99■□□□□ 0.15
CLPTM1-202ENST00000541297 LIMS2Q7Z4I7 341 aa15.99■□□□□ 0.15
CLPTM1-202ENST00000541297 SEMA4AQ9H3S1 761 aa15.99■□□□□ 0.15
CLPTM1-202ENST00000541297 F8W810 466 aa15.99■□□□□ 0.15
CLPTM1-202ENST00000541297 GRAP2O75791 330 aa15.99■□□□□ 0.15
CLPTM1-202ENST00000541297 B3GAT3O94766 335 aa15.99■□□□□ 0.15
CLPTM1-202ENST00000541297 SELPP16109 830 aa15.99■□□□□ 0.15
CLPTM1-202ENST00000541297 GBP2P32456 591 aaPredicted RBP15.99■□□□□ 0.15
CLPTM1-202ENST00000541297 SLCO1A2P46721 670 aa15.99■□□□□ 0.15
CLPTM1-202ENST00000541297 IFNAR2P48551 515 aa15.99■□□□□ 0.15
CLPTM1-202ENST00000541297 STILQ15468 1287 aa15.99■□□□□ 0.15
CLPTM1-202ENST00000541297 ATP13A4Q4VNC1 1196 aa15.99■□□□□ 0.15
CLPTM1-202ENST00000541297 PKDCCQ504Y2 493 aa15.99■□□□□ 0.15
CLPTM1-202ENST00000541297 ZFYVE27Q5T4F4 411 aa15.99■□□□□ 0.15
CLPTM1-202ENST00000541297 OR6B2Q6IFH4 312 aa15.99■□□□□ 0.15
CLPTM1-202ENST00000541297 TRPM8Q7Z2W7 1104 aa15.99■□□□□ 0.15
CLPTM1-202ENST00000541297 ZNF598Q86UK7 904 aaKnown RBP15.99■□□□□ 0.15
CLPTM1-202ENST00000541297 B3GALNT2Q8NCR0 500 aa15.99■□□□□ 0.15
CLPTM1-202ENST00000541297 SAMD15Q9P1V8 674 aa15.99■□□□□ 0.15
CLPTM1-202ENST00000541297 GOLGA6L10A0A0M3HER8 536 aa15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 SIGLEC16A6NMB1 481 aa15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 NBNO60934 754 aa15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 GSTA1P08263 222 aa15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 GABRB2P47870 512 aa15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 FAM183BPQ6ZVS7 135 aa15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 SLC24A5Q71RS6 500 aa15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 ZDHHC14Q8IZN3 488 aa15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 CRYBG2Q8N1P7 616 aa15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 ACSF2Q96CM8 615 aaPredicted RBP15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 STAMBPL1Q96FJ0 436 aa15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 DDX27Q96GQ7 796 aaKnown RBP15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 ABCF3Q9NUQ8 709 aa15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 DDX43Q9NXZ2 648 aaKnown RBP15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 C9IYK1 514 aa15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 CLDN5O00501 218 aa15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 SKIP12755 728 aa15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 WARSP23381 471 aaKnown RBP15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 PSMA2P25787 234 aa15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 TKTP29401 623 aaKnown RBP15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 BRCC3P46736 316 aa15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 ZNF268Q14587 947 aaPredicted RBP15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 TIGD5Q53EQ6 642 aa15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 KIAA0319Q5VV43 1072 aa15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 SCUBE3Q8IX30 993 aa15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 RHOT1Q8IXI2 618 aa15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 EPS8L3Q8TE67 593 aaKnown RBP15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 NAP1L3Q99457 506 aaPredicted RBP15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 B3GNT5Q9BYG0 378 aa15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 MIS12Q9H081 205 aa15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 GGT7Q9UJ14 662 aa15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 OGDHLQ9ULD0 1010 aa15.98■□□□□ 0.15
CLPTM1-202ENST00000541297 FAM187AA6NFU0 413 aa15.97■□□□□ 0.15
CLPTM1-202ENST00000541297 TAP1Q03518 808 aa15.97■□□□□ 0.15
CLPTM1-202ENST00000541297 GRIK3Q13003 919 aa15.97■□□□□ 0.15
CLPTM1-202ENST00000541297 CRYMQ14894 314 aa15.97■□□□□ 0.15
CLPTM1-202ENST00000541297 GPNMBQ14956 572 aa15.97■□□□□ 0.15
CLPTM1-202ENST00000541297 TXNRD3NBQ6F5E7 133 aa15.97■□□□□ 0.15
CLPTM1-202ENST00000541297 SLC35F5Q8WV83 523 aa15.97■□□□□ 0.15
CLPTM1-202ENST00000541297 TNIP3Q96KP6 325 aa15.97■□□□□ 0.15
CLPTM1-202ENST00000541297 WBP1LQ9NX94 342 aa15.97■□□□□ 0.15
CLPTM1-202ENST00000541297 GRHL1Q9NZI5 618 aa15.97■□□□□ 0.15
CLPTM1-202ENST00000541297 WDR35Q9P2L0 1181 aa15.97■□□□□ 0.15
CLPTM1-202ENST00000541297 L3MBTL1Q9Y468 752 aa15.97■□□□□ 0.15
CLPTM1-202ENST00000541297 ITGB1P05556 798 aa15.97■□□□□ 0.15
CLPTM1-202ENST00000541297 PAX7P23759 505 aa15.97■□□□□ 0.15
CLPTM1-202ENST00000541297 DHX34Q14147 1143 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms