RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 SAE1Q9UBE0 346 aaPredicted RBP14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 MSCO60682 206 aa14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 GPR32O75388 356 aa14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 PRKCBP05771 671 aa14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 MUTP22033 750 aa14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 ATP5DP30049 168 aa14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 FOXN2P32314 431 aa14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 ROR2Q01974 943 aaKnown RBP14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 MBTD1Q05BQ5 628 aa14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 ZNF484Q5JVG2 852 aa14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 COL13A1Q5TAT6 717 aaPredicted RBP14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 RNF169Q8NCN4 708 aa14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 TRAIPQ9BWF2 469 aa14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 TBC1D10AQ9BXI6 508 aa14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 DENND2DQ9H6A0 471 aaPredicted RBP14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 KLK14Q9P0G3 267 aa14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 DCTN4Q9UJW0 460 aa14.98□□□□□ -0.01
SFSWAP-210ENST00000541286 GOLGA8RI6L899 631 aa14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 GNA15P30679 374 aa14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 RPL7AP62424 266 aaKnown RBP14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 GPS1Q13098 491 aa14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 MYBPC2Q14324 1141 aa14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 FASTKD3Q14CZ7 662 aaKnown RBP14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 ZNF618Q5T7W0 954 aa14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 LIN9Q5TKA1 542 aa14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 DCUN1D2Q6PH85 259 aa14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 SCARA5Q6ZMJ2 495 aa14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 ASRGL1Q7L266 308 aa14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 DPH6Q7L8W6 267 aa14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 ANKS1BQ7Z6G8 1248 aa14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 LINC01465Q8N7H1 131 aa14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 GRK7Q8WTQ7 553 aa14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 DDX1Q92499 740 aaKnown RBP14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 KLF6Q99612 283 aaPredicted RBP14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 WHRNQ9P202 907 aa14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 CDY2AQ9Y6F7 541 aa14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 ARF4P18085 180 aaPredicted RBP14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 SLC26A2P50443 739 aa14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 NOP14P78316 857 aaKnown RBP14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 GLRA4Q5JXX5 417 aa14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 SPDYCQ5MJ68 293 aa14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 RASIP1Q5U651 963 aa14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 IER5Q5VY09 327 aa14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 ZNF516Q92618 1163 aa14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 SERPINB12Q96P63 405 aa14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 RNF39Q9H2S5 420 aa14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 LNPEPQ9UIQ6 1025 aa14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 ATP11BQ9Y2G3 1177 aa14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 TRIP11Q15643 1979 aa14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 ATP8B3O60423 1300 aa14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 PTPRJQ12913 1337 aa14.97□□□□□ -0.01
SFSWAP-210ENST00000541286 TP73O15350 636 aa14.96□□□□□ -0.01
SFSWAP-210ENST00000541286 UNC5CO95185 931 aa14.96□□□□□ -0.01
SFSWAP-210ENST00000541286 KRT1P04264 644 aa14.96□□□□□ -0.01
SFSWAP-210ENST00000541286 GNAZP19086 355 aa14.96□□□□□ -0.01
SFSWAP-210ENST00000541286 AKAP5P24588 427 aa14.96□□□□□ -0.01
SFSWAP-210ENST00000541286 CYP1B1Q16678 543 aa14.96□□□□□ -0.01
SFSWAP-210ENST00000541286 TRIM74Q86UV6 250 aa14.96□□□□□ -0.01
SFSWAP-210ENST00000541286 TRIM73Q86UV7 250 aa14.96□□□□□ -0.01
SFSWAP-210ENST00000541286 STK32AQ8WU08 396 aa14.96□□□□□ -0.01
SFSWAP-210ENST00000541286 ROPN1BQ9BZX4 212 aaPredicted RBP14.96□□□□□ -0.01
SFSWAP-210ENST00000541286 C12orf65Q9H3J6 166 aaKnown RBP14.96□□□□□ -0.01
SFSWAP-210ENST00000541286 ROPN1Q9HAT0 212 aaPredicted RBP14.96□□□□□ -0.01
SFSWAP-210ENST00000541286 COL6A3P12111 3177 aa14.96□□□□□ -0.01
SFSWAP-210ENST00000541286 MAGEA4P43358 317 aa14.96□□□□□ -0.01
SFSWAP-210ENST00000541286 ARSEP51690 589 aa14.96□□□□□ -0.01
SFSWAP-210ENST00000541286 MBTPS1Q14703 1052 aa14.96□□□□□ -0.01
SFSWAP-210ENST00000541286 TRIM60Q495X7 471 aa14.96□□□□□ -0.01
SFSWAP-210ENST00000541286 FBXO46Q6PJ61 603 aaPredicted RBP14.96□□□□□ -0.01
SFSWAP-210ENST00000541286 MAP4K3Q8IVH8 894 aa14.96□□□□□ -0.01
SFSWAP-210ENST00000541286 ZBED8Q8IZ13 594 aa14.96□□□□□ -0.01
SFSWAP-210ENST00000541286 LPPQ93052 612 aa14.96□□□□□ -0.01
SFSWAP-210ENST00000541286 ADAMTS10Q9H324 1103 aa14.96□□□□□ -0.01
SFSWAP-210ENST00000541286 DNPEPQ9ULA0 475 aa14.96□□□□□ -0.01
SFSWAP-210ENST00000541286 PCDHB2Q9Y5E7 798 aa14.96□□□□□ -0.01
SFSWAP-210ENST00000541286 KBTBD13C9JR72 458 aa14.96□□□□□ -0.02
SFSWAP-210ENST00000541286 SGK1O00141 431 aa14.96□□□□□ -0.02
SFSWAP-210ENST00000541286 GNRH1P01148 92 aa14.96□□□□□ -0.02
SFSWAP-210ENST00000541286 CA4P22748 312 aa14.96□□□□□ -0.02
SFSWAP-210ENST00000541286 ITGB8P26012 769 aa14.96□□□□□ -0.02
SFSWAP-210ENST00000541286 ALDH3A1P30838 453 aa14.96□□□□□ -0.02
SFSWAP-210ENST00000541286 CD52P31358 61 aa14.96□□□□□ -0.02
SFSWAP-210ENST00000541286 NAMPTP43490 491 aa14.96□□□□□ -0.02
SFSWAP-210ENST00000541286 OVGP1Q12889 678 aa14.96□□□□□ -0.02
SFSWAP-210ENST00000541286 STRN3Q13033 797 aa14.96□□□□□ -0.02
SFSWAP-210ENST00000541286 SEPT7Q16181 437 aaKnown RBP14.96□□□□□ -0.02
SFSWAP-210ENST00000541286 SMTNL2Q2TAL5 461 aa14.96□□□□□ -0.02
SFSWAP-210ENST00000541286 ARHGEF18Q6ZSZ5 1173 aa14.96□□□□□ -0.02
SFSWAP-210ENST00000541286 CCDC89Q8N998 374 aa14.96□□□□□ -0.02
SFSWAP-210ENST00000541286 GORASP1Q9BQQ3 440 aa14.96□□□□□ -0.02
SFSWAP-210ENST00000541286 NMRK1Q9NWW6 199 aa14.96□□□□□ -0.02
SFSWAP-210ENST00000541286 MBLAC1A4D2B0 266 aaPredicted RBP14.95□□□□□ -0.02
SFSWAP-210ENST00000541286 CETN2P41208 172 aa14.95□□□□□ -0.02
SFSWAP-210ENST00000541286 ARHGEF6Q15052 776 aa14.95□□□□□ -0.02
SFSWAP-210ENST00000541286 DSTYKQ6XUX3 929 aa14.95□□□□□ -0.02
SFSWAP-210ENST00000541286 RHOT1Q8IXI2 618 aa14.95□□□□□ -0.02
SFSWAP-210ENST00000541286 GALNT15Q8N3T1 639 aa14.95□□□□□ -0.02
SFSWAP-210ENST00000541286 DDX27Q96GQ7 796 aaKnown RBP14.95□□□□□ -0.02
SFSWAP-210ENST00000541286 WDR35Q9P2L0 1181 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms