RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 B4GALNT2Q8NHY0 566 aa11.84□□□□□ -0.51
LGR5-203ENST00000540815 PPP1R13LQ8WUF5 828 aa11.84□□□□□ -0.51
LGR5-203ENST00000540815 EZH1Q92800 747 aaPredicted RBP11.84□□□□□ -0.51
LGR5-203ENST00000540815 C9orf72Q96LT7 481 aa11.84□□□□□ -0.51
LGR5-203ENST00000540815 CFAP57Q96MR6 1250 aa11.84□□□□□ -0.51
LGR5-203ENST00000540815 NT5C1AQ9BXI3 368 aa11.84□□□□□ -0.51
LGR5-203ENST00000540815 MIS12Q9H081 205 aa11.84□□□□□ -0.51
LGR5-203ENST00000540815 ABHD16BQ9H3Z7 469 aa11.84□□□□□ -0.51
LGR5-203ENST00000540815 PLEKHA5Q9HAU0 1116 aa11.84□□□□□ -0.51
LGR5-203ENST00000540815 ASNSD1Q9NWL6 643 aa11.84□□□□□ -0.51
LGR5-203ENST00000540815 CTNNAL1Q9UBT7 734 aa11.84□□□□□ -0.51
LGR5-203ENST00000540815 SHOC2Q9UQ13 582 aa11.84□□□□□ -0.51
LGR5-203ENST00000540815 ZNF236Q9UL36 1845 aa11.84□□□□□ -0.51
LGR5-203ENST00000540815 RRN3P2A6NIE6 340 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 SGK1O00141 431 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 RNF8O76064 485 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 CYP3A5P20815 502 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 MIPP30301 263 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 PSMC4P43686 418 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 ZNF143P52747 638 aaPredicted RBP11.83□□□□□ -0.52
LGR5-203ENST00000540815 OTUD4Q01804 1114 aaKnown RBP11.83□□□□□ -0.52
LGR5-203ENST00000540815 STILQ15468 1287 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 KCNT1Q5JUK3 1230 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 FAM102AQ5T9C2 384 aaPredicted RBP11.83□□□□□ -0.52
LGR5-203ENST00000540815 NUGGCQ68CJ6 796 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 RIBC1Q8N443 379 aaPredicted RBP11.83□□□□□ -0.52
LGR5-203ENST00000540815 UBA3Q8TBC4 463 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 DYDC1Q8WWB3 177 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 DDX50Q9BQ39 737 aaKnown RBP11.83□□□□□ -0.52
LGR5-203ENST00000540815 TINF2Q9BSI4 451 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 TMEM121Q9BTD3 319 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 ADAMTS10Q9H324 1103 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 TMEM165Q9HC07 324 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 SAYSD1Q9NPB0 183 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 CST8O60676 142 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 CDH16O75309 829 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 NPTXRO95502 500 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 PLCB3Q01970 1234 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 VSTM1Q6UX27 236 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 PCGF5Q86SE9 256 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 KCTD6Q8NC69 237 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 TTC8Q8TAM2 541 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 NPLOC4Q8TAT6 608 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 ACTL9Q8TC94 416 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 UTP4Q969X6 686 aaKnown RBP11.83□□□□□ -0.52
LGR5-203ENST00000540815 PCMTD2Q9NV79 361 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 EURLQ9NYK6 297 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 TSPAN16Q9UKR8 245 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 USP18Q9UMW8 372 aa11.83□□□□□ -0.52
LGR5-203ENST00000540815 GPD1P21695 349 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 DYNLT1P63172 113 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 CDC42EP1Q00587 391 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 PLEKHH3Q7Z736 793 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 PTPN18Q99952 460 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 ETNK1Q9HBU6 452 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 PCSK1NQ9UHG2 260 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 FARP1Q9Y4F1 1045 aaPredicted RBP11.82□□□□□ -0.52
LGR5-203ENST00000540815 ACTL7BQ9Y614 415 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 PDCD11Q14690 1871 aaKnown RBP11.82□□□□□ -0.52
LGR5-203ENST00000540815 SCN1AP35498 2009 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 TMEM120BA0PK00 339 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 FESP07332 822 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 PFKMP08237 780 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 CD48P09326 243 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 CCND1P24385 295 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 HOXA11P31270 313 aaPredicted RBP11.82□□□□□ -0.52
LGR5-203ENST00000540815 KIZQ2M2Z5 673 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 CYP4F22Q6NT55 531 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 FAM183BPQ6ZVS7 135 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 DPH6Q7L8W6 267 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 TRIM74Q86UV6 250 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 TRIM73Q86UV7 250 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 SNX27Q96L92 541 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 PARK7Q99497 189 aaKnown RBP11.82□□□□□ -0.52
LGR5-203ENST00000540815 CNPY3Q9BT09 278 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 ADAM33Q9BZ11 813 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 GCOM2Q9BZD3 368 aaPredicted RBP11.82□□□□□ -0.52
LGR5-203ENST00000540815 UBE2OQ9C0C9 1292 aaKnown RBP11.82□□□□□ -0.52
LGR5-203ENST00000540815 PHACTR1Q9C0D0 580 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 SETD4Q9NVD3 440 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 NAALADL1Q9UQQ1 740 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 CLEC11AQ9Y240 323 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 C2CD4BA6NLJ0 364 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 APOC4-APOC2K7ER74 178 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 ALOX15BO15296 676 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 ENTPD5O75356 428 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 GPR32O75388 356 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 IFNB1P01574 187 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 APOC2P02655 101 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 FKBP1BP68106 108 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 MGAT5Q09328 741 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 FAM110CQ1W6H9 321 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 GOLGA7BQ2TAP0 167 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 SLC27A1Q6PCB7 646 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 CENPUQ71F23 418 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 RFX6Q8HWS3 928 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 DOCK3Q8IZD9 2030 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 CYP4X1Q8N118 509 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 ITFG2Q969R8 447 aa11.82□□□□□ -0.52
LGR5-203ENST00000540815 RSAD1Q9HA92 442 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms