RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 PCDHA7Q9UN72 937 aa17.26■□□□□ 0.35
TRIM65-203ENST00000540812 CFAP47Q6ZTR5 3102 aa17.25■□□□□ 0.35
TRIM65-203ENST00000540812 PVALEFA0A1B0GWK0 134 aa17.25■□□□□ 0.35
TRIM65-203ENST00000540812 LRRIQ3A6PVS8 624 aaPredicted RBP17.25■□□□□ 0.35
TRIM65-203ENST00000540812 SLC9A3R1O14745 358 aaPredicted RBP17.25■□□□□ 0.35
TRIM65-203ENST00000540812 PMLP29590 882 aa17.25■□□□□ 0.35
TRIM65-203ENST00000540812 TIE1P35590 1138 aa17.25■□□□□ 0.35
TRIM65-203ENST00000540812 MRPS21P82921 87 aaKnown RBP17.25■□□□□ 0.35
TRIM65-203ENST00000540812 BIRC3Q13489 604 aa17.25■□□□□ 0.35
TRIM65-203ENST00000540812 CRY1Q16526 586 aa17.25■□□□□ 0.35
TRIM65-203ENST00000540812 ZNF699Q32M78 642 aa17.25■□□□□ 0.35
TRIM65-203ENST00000540812 USP39Q53GS9 565 aaKnown RBP17.25■□□□□ 0.35
TRIM65-203ENST00000540812 RESP18Q5W5W9 173 aa17.25■□□□□ 0.35
TRIM65-203ENST00000540812 PMS2CLQ68D20 193 aa17.25■□□□□ 0.35
TRIM65-203ENST00000540812 FAM35AQ86V20 835 aa17.25■□□□□ 0.35
TRIM65-203ENST00000540812 ALLCQ8N6M5 410 aa17.25■□□□□ 0.35
TRIM65-203ENST00000540812 PNKPQ96T60 521 aa17.25■□□□□ 0.35
TRIM65-203ENST00000540812 EDEM2Q9BV94 578 aa17.25■□□□□ 0.35
TRIM65-203ENST00000540812 LSM14BQ9BX40 385 aaKnown RBP17.25■□□□□ 0.35
TRIM65-203ENST00000540812 ZDHHC4Q9NPG8 344 aa17.25■□□□□ 0.35
TRIM65-203ENST00000540812 CGNQ9P2M7 1197 aaKnown RBP17.25■□□□□ 0.35
TRIM65-203ENST00000540812 CHORDC1Q9UHD1 332 aaPredicted RBP17.25■□□□□ 0.35
TRIM65-203ENST00000540812 FRYQ5TBA9 3013 aa17.24■□□□□ 0.35
TRIM65-203ENST00000540812 TNFRSF10BO14763 440 aa17.24■□□□□ 0.35
TRIM65-203ENST00000540812 COCHO43405 550 aa17.24■□□□□ 0.35
TRIM65-203ENST00000540812 KLRC4O43908 158 aa17.24■□□□□ 0.35
TRIM65-203ENST00000540812 RTN3O95197 1032 aaPredicted RBP17.24■□□□□ 0.35
TRIM65-203ENST00000540812 VNN1O95497 513 aa17.24■□□□□ 0.35
TRIM65-203ENST00000540812 KLF8O95600 359 aaPredicted RBP17.24■□□□□ 0.35
TRIM65-203ENST00000540812 C4BPAP04003 597 aaKnown RBP17.24■□□□□ 0.35
TRIM65-203ENST00000540812 APODP05090 189 aa17.24■□□□□ 0.35
TRIM65-203ENST00000540812 ADH5P11766 374 aa17.24■□□□□ 0.35
TRIM65-203ENST00000540812 KDSRQ06136 332 aa17.24■□□□□ 0.35
TRIM65-203ENST00000540812 ST3GAL2Q16842 350 aa17.24■□□□□ 0.35
TRIM65-203ENST00000540812 EMC10Q5UCC4 262 aa17.24■□□□□ 0.35
TRIM65-203ENST00000540812 TTC30AQ86WT1 665 aa17.24■□□□□ 0.35
TRIM65-203ENST00000540812 IL17RCQ8NAC3 791 aa17.24■□□□□ 0.35
TRIM65-203ENST00000540812 TXNDC5Q8NBS9 432 aaKnown RBP17.24■□□□□ 0.35
TRIM65-203ENST00000540812 PARD3BQ8TEW8 1205 aa17.24■□□□□ 0.35
TRIM65-203ENST00000540812 WBP2Q969T9 261 aa17.24■□□□□ 0.35
TRIM65-203ENST00000540812 MED10Q9BTT4 135 aa17.24■□□□□ 0.35
TRIM65-203ENST00000540812 CCSER2Q9H7U1 834 aa17.24■□□□□ 0.35
TRIM65-203ENST00000540812 FAM13BQ9NYF5 915 aa17.24■□□□□ 0.35
TRIM65-203ENST00000540812 SERTAD1Q9UHV2 236 aa17.24■□□□□ 0.35
TRIM65-203ENST00000540812 C4orf47A7E2U8 309 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 SGK1O00141 431 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 CLSTN1O94985 981 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 KAT7O95251 611 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 KCNK5O95279 499 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 ADH1CP00326 375 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 F13A1P00488 732 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 ZSCAN22P10073 491 aaPredicted RBP17.23■□□□□ 0.35
TRIM65-203ENST00000540812 ME1P48163 572 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 PGFP49763 221 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 SLC5A3P53794 718 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 CLDN10P78369 228 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 STK4Q13043 487 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 ORC1Q13415 861 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 NCOA4Q13772 614 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 ZNF667Q5HYK9 610 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 LY6G5CQ5SRR4 150 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 HECTD3Q5T447 861 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 ACOT1Q86TX2 421 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 DDX42Q86XP3 938 aaKnown RBP eCLIP17.23■□□□□ 0.35
TRIM65-203ENST00000540812 FUKQ8N0W3 1084 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 PHTF2Q8N3S3 785 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 KIAA0895Q8NCT3 520 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 PDZD8Q8NEN9 1154 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 RLN3Q8WXF3 142 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 OVCA2Q8WZ82 227 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 CHAMP1Q96JM3 812 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 ARHGEF4Q9NR80 690 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 DMAC2Q9NW81 257 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 IL37Q9NZH6 218 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 GMIPQ9P107 970 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 ASPMQ8IZT6 3477 aa17.23■□□□□ 0.35
TRIM65-203ENST00000540812 ATP8B3O60423 1300 aa17.22■□□□□ 0.35
TRIM65-203ENST00000540812 A0A0A0MRY4 1105 aa17.22■□□□□ 0.35
TRIM65-203ENST00000540812 E2F8A0AVK6 867 aa17.22■□□□□ 0.35
TRIM65-203ENST00000540812 LNP1A1A4G5 178 aa17.22■□□□□ 0.35
TRIM65-203ENST00000540812 PATE3B3GLJ2 98 aa17.22■□□□□ 0.35
TRIM65-203ENST00000540812 ADAM23O75077 832 aa17.22■□□□□ 0.35
TRIM65-203ENST00000540812 BEST1O76090 585 aa17.22■□□□□ 0.35
TRIM65-203ENST00000540812 ZDHHC11BP0C7U3 371 aa17.22■□□□□ 0.35
TRIM65-203ENST00000540812 CCDC130P13994 396 aa17.22■□□□□ 0.35
TRIM65-203ENST00000540812 EIF2DP41214 584 aaKnown RBP17.22■□□□□ 0.35
TRIM65-203ENST00000540812 KIR2DL1P43626 348 aaPredicted RBP17.22■□□□□ 0.35
TRIM65-203ENST00000540812 DLG4P78352 724 aa17.22■□□□□ 0.35
TRIM65-203ENST00000540812 PKP1Q13835 747 aa17.22■□□□□ 0.35
TRIM65-203ENST00000540812 SNX30Q5VWJ9 437 aa17.22■□□□□ 0.35
TRIM65-203ENST00000540812 C11orf74Q86VG3 221 aa17.22■□□□□ 0.35
TRIM65-203ENST00000540812 BBS7Q8IWZ6 715 aa17.22■□□□□ 0.35
TRIM65-203ENST00000540812 NAT16Q8N8M0 369 aa17.22■□□□□ 0.35
TRIM65-203ENST00000540812 ZMIZ2Q8NF64 920 aa17.22■□□□□ 0.35
TRIM65-203ENST00000540812 OLIG1Q8TAK6 271 aa17.22■□□□□ 0.35
TRIM65-203ENST00000540812 GOLGA5Q8TBA6 731 aa17.22■□□□□ 0.35
TRIM65-203ENST00000540812 SMARCD1Q96GM5 515 aa17.22■□□□□ 0.35
TRIM65-203ENST00000540812 SMOQ99835 787 aa17.22■□□□□ 0.35
TRIM65-203ENST00000540812 DMAP1Q9NPF5 467 aaPredicted RBP17.22■□□□□ 0.35
TRIM65-203ENST00000540812 KRT82Q9NSB4 513 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms