RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 VSTM4Q8IW00 320 aa16.32■□□□□ 0.2
DDB1-218ENST00000540784 SIX6OS1Q8N1H7 587 aa16.32■□□□□ 0.2
DDB1-218ENST00000540784 MAB21L3Q8N8X9 362 aa16.32■□□□□ 0.2
DDB1-218ENST00000540784 TMEM35BQ8NCS4 154 aa16.32■□□□□ 0.2
DDB1-218ENST00000540784 ADAMTS19Q8TE59 1207 aa16.32■□□□□ 0.2
DDB1-218ENST00000540784 NOX5Q96PH1 765 aa16.32■□□□□ 0.2
DDB1-218ENST00000540784 TLR8Q9NR97 1041 aaKnown RBP16.32■□□□□ 0.2
DDB1-218ENST00000540784 ST7Q9NRC1 585 aa16.32■□□□□ 0.2
DDB1-218ENST00000540784 GMIPQ9P107 970 aa16.32■□□□□ 0.2
DDB1-218ENST00000540784 NOCTQ9UK39 431 aaKnown RBP16.32■□□□□ 0.2
DDB1-218ENST00000540784 SPTBN5Q9NRC6 3674 aaKnown RBP16.32■□□□□ 0.2
DDB1-218ENST00000540784 NCANO14594 1321 aa16.31■□□□□ 0.2
DDB1-218ENST00000540784 PIK3R2O00459 728 aa16.31■□□□□ 0.2
DDB1-218ENST00000540784 MMEP08473 750 aa16.31■□□□□ 0.2
DDB1-218ENST00000540784 TPM1P09493 284 aa16.31■□□□□ 0.2
DDB1-218ENST00000540784 HDCP19113 662 aa16.31■□□□□ 0.2
DDB1-218ENST00000540784 SNX16P57768 344 aa16.31■□□□□ 0.2
DDB1-218ENST00000540784 ADIGQ0VDE8 80 aa16.31■□□□□ 0.2
DDB1-218ENST00000540784 FAM78AQ5JUQ0 283 aa16.31■□□□□ 0.2
DDB1-218ENST00000540784 STXBP5Q5T5C0 1151 aa16.31■□□□□ 0.2
DDB1-218ENST00000540784 SNX30Q5VWJ9 437 aa16.31■□□□□ 0.2
DDB1-218ENST00000540784 PM20D1Q6GTS8 502 aa16.31■□□□□ 0.2
DDB1-218ENST00000540784 POTEHQ6S545 545 aa16.31■□□□□ 0.2
DDB1-218ENST00000540784 CCDC186Q7Z3E2 898 aa16.31■□□□□ 0.2
DDB1-218ENST00000540784 GJD3Q8N144 294 aa16.31■□□□□ 0.2
DDB1-218ENST00000540784 ARHGAP18Q8N392 663 aa16.31■□□□□ 0.2
DDB1-218ENST00000540784 ZSCAN18Q8TBC5 510 aaPredicted RBP16.31■□□□□ 0.2
DDB1-218ENST00000540784 SLC20A1Q8WUM9 679 aa16.31■□□□□ 0.2
DDB1-218ENST00000540784 AGPAT1Q99943 283 aa16.31■□□□□ 0.2
DDB1-218ENST00000540784 SLC4A5Q9BY07 1137 aa16.31■□□□□ 0.2
DDB1-218ENST00000540784 ULBP1Q9BZM6 244 aa16.31■□□□□ 0.2
DDB1-218ENST00000540784 TRPC7Q9HCX4 862 aa16.31■□□□□ 0.2
DDB1-218ENST00000540784 CYLDQ9NQC7 956 aa16.31■□□□□ 0.2
DDB1-218ENST00000540784 CNGB3Q9NQW8 809 aa16.31■□□□□ 0.2
DDB1-218ENST00000540784 C2orf16Q68DN1 1984 aa16.31■□□□□ 0.2
DDB1-218ENST00000540784 PTPRDP23468 1912 aa16.31■□□□□ 0.2
DDB1-218ENST00000540784 TRAV19A0A0A6YYK7 116 aa16.3■□□□□ 0.2
DDB1-218ENST00000540784 TADA3O75528 432 aa16.3■□□□□ 0.2
DDB1-218ENST00000540784 GABBR2O75899 941 aa16.3■□□□□ 0.2
DDB1-218ENST00000540784 FBXO21O94952 628 aa16.3■□□□□ 0.2
DDB1-218ENST00000540784 GYPCP04921 128 aa16.3■□□□□ 0.2
DDB1-218ENST00000540784 ZDHHC11BP0C7U3 371 aa16.3■□□□□ 0.2
DDB1-218ENST00000540784 CHRNB2P17787 502 aa16.3■□□□□ 0.2
DDB1-218ENST00000540784 PFKLP17858 780 aa16.3■□□□□ 0.2
DDB1-218ENST00000540784 CASP14P31944 242 aa16.3■□□□□ 0.2
DDB1-218ENST00000540784 RPL34P49207 117 aaKnown RBP16.3■□□□□ 0.2
DDB1-218ENST00000540784 PSEN1P49768 467 aa16.3■□□□□ 0.2
DDB1-218ENST00000540784 ZNF75DP51815 510 aa16.3■□□□□ 0.2
DDB1-218ENST00000540784 TRIM14Q14142 442 aa16.3■□□□□ 0.2
DDB1-218ENST00000540784 HECTD3Q5T447 861 aa16.3■□□□□ 0.2
DDB1-218ENST00000540784 TRIM72Q6ZMU5 477 aa16.3■□□□□ 0.2
DDB1-218ENST00000540784 MTSS1LQ765P7 747 aa16.3■□□□□ 0.2
DDB1-218ENST00000540784 TMEM110Q86TL2 294 aa16.3■□□□□ 0.2
DDB1-218ENST00000540784 ARID3BQ8IVW6 561 aaPredicted RBP16.3■□□□□ 0.2
DDB1-218ENST00000540784 SCUBE3Q8IX30 993 aa16.3■□□□□ 0.2
DDB1-218ENST00000540784 SYN2Q92777 582 aaPredicted RBP16.3■□□□□ 0.2
DDB1-218ENST00000540784 SMARCD2Q92925 531 aa16.3■□□□□ 0.2
DDB1-218ENST00000540784 NXPE3Q969Y0 559 aa16.3■□□□□ 0.2
DDB1-218ENST00000540784 PPP1R13BQ96KQ4 1090 aa16.3■□□□□ 0.2
DDB1-218ENST00000540784 NECAB3Q96P71 396 aaPredicted RBP16.3■□□□□ 0.2
DDB1-218ENST00000540784 CYP2S1Q96SQ9 504 aa16.3■□□□□ 0.2
DDB1-218ENST00000540784 UHRF1Q96T88 793 aaPredicted RBP16.3■□□□□ 0.2
DDB1-218ENST00000540784 MIS12Q9H081 205 aa16.3■□□□□ 0.2
DDB1-218ENST00000540784 CYTH4Q9UIA0 394 aa16.3■□□□□ 0.2
DDB1-218ENST00000540784 A0A1W2PQH9 124 aa16.29■□□□□ 0.2
DDB1-218ENST00000540784 C2orf78A6NCI8 922 aa16.29■□□□□ 0.2
DDB1-218ENST00000540784 ANHXE9PGG2 379 aa16.29■□□□□ 0.2
DDB1-218ENST00000540784 LSM8O95777 96 aaKnown RBP16.29■□□□□ 0.2
DDB1-218ENST00000540784 TNFAIP3P21580 790 aa16.29■□□□□ 0.2
DDB1-218ENST00000540784 WEE1P30291 646 aa16.29■□□□□ 0.2
DDB1-218ENST00000540784 AVPR1AP37288 418 aa16.29■□□□□ 0.2
DDB1-218ENST00000540784 KLHL30Q0D2K2 578 aa16.29■□□□□ 0.2
DDB1-218ENST00000540784 PDCLQ13371 301 aa16.29■□□□□ 0.2
DDB1-218ENST00000540784 TSR1Q2NL82 804 aaKnown RBP16.29■□□□□ 0.2
DDB1-218ENST00000540784 PARM1Q6UWI2 310 aa16.29■□□□□ 0.2
DDB1-218ENST00000540784 TMC6Q7Z403 805 aa16.29■□□□□ 0.2
DDB1-218ENST00000540784 SCD5Q86SK9 330 aa16.29■□□□□ 0.2
DDB1-218ENST00000540784 CMTM8Q8IZV2 173 aa16.29■□□□□ 0.2
DDB1-218ENST00000540784 SCML4Q8N228 414 aa16.29■□□□□ 0.2
DDB1-218ENST00000540784 ARL14EPQ8N8R7 260 aaPredicted RBP16.29■□□□□ 0.2
DDB1-218ENST00000540784 C1orf131Q8NDD1 294 aaKnown RBP16.29■□□□□ 0.2
DDB1-218ENST00000540784 NDRG1Q92597 394 aaKnown RBP16.29■□□□□ 0.2
DDB1-218ENST00000540784 MRFAP1L1Q96HT8 127 aa16.29■□□□□ 0.2
DDB1-218ENST00000540784 ASB16Q96NS5 453 aa16.29■□□□□ 0.2
DDB1-218ENST00000540784 SYNCQ9H7C4 482 aa16.29■□□□□ 0.2
DDB1-218ENST00000540784 ZFP14Q9HCL3 533 aa16.29■□□□□ 0.2
DDB1-218ENST00000540784 SEPT11Q9NVA2 429 aaKnown RBP16.29■□□□□ 0.2
DDB1-218ENST00000540784 IGSF9Q9P2J2 1179 aa16.29■□□□□ 0.2
DDB1-218ENST00000540784 NAGPAQ9UK23 515 aa16.29■□□□□ 0.2
DDB1-218ENST00000540784 BZW2Q9Y6E2 419 aaKnown RBP16.29■□□□□ 0.2
DDB1-218ENST00000540784 DOCK6Q96HP0 2047 aa16.29■□□□□ 0.2
DDB1-218ENST00000540784 NOTCH4Q99466 2003 aa16.29■□□□□ 0.2
DDB1-218ENST00000540784 CKMP06732 381 aa16.28■□□□□ 0.2
DDB1-218ENST00000540784 RALAP11233 206 aa16.28■□□□□ 0.2
DDB1-218ENST00000540784 SKILP12757 684 aa16.28■□□□□ 0.2
DDB1-218ENST00000540784 RARGP13631 454 aa16.28■□□□□ 0.2
DDB1-218ENST00000540784 CDH5P33151 784 aaPredicted RBP16.28■□□□□ 0.2
DDB1-218ENST00000540784 PGFP49763 221 aa16.28■□□□□ 0.2
DDB1-218ENST00000540784 YWHAGP61981 247 aaKnown RBP eCLIP16.28■□□□□ 0.2
DDB1-218ENST00000540784 FMO1Q01740 532 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms