RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 VARS2Q5ST30 1063 aaKnown RBP25.71■■□□□ 1.71
TTC3-225ENST00000540756 FAM117BQ6P1L5 589 aa25.71■■□□□ 1.71
TTC3-225ENST00000540756 CCNI2Q6ZMN8 369 aaPredicted RBP25.71■■□□□ 1.71
TTC3-225ENST00000540756 RCOR2Q8IZ40 523 aa25.71■■□□□ 1.71
TTC3-225ENST00000540756 FAM172AQ8WUF8 416 aa25.71■■□□□ 1.71
TTC3-225ENST00000540756 ULBP1Q9BZM6 244 aa25.71■■□□□ 1.71
TTC3-225ENST00000540756 COL4A6Q14031 1691 aa25.71■■□□□ 1.71
TTC3-225ENST00000540756 DPYSL4O14531 572 aa25.71■■□□□ 1.71
TTC3-225ENST00000540756 PHF2O75151 1096 aa25.71■■□□□ 1.71
TTC3-225ENST00000540756 TIMP1P01033 207 aa25.71■■□□□ 1.71
TTC3-225ENST00000540756 ACRP10323 421 aa25.71■■□□□ 1.71
TTC3-225ENST00000540756 TSPY1Q01534 308 aa25.71■■□□□ 1.71
TTC3-225ENST00000540756 TAS1R1Q7RTX1 841 aa25.71■■□□□ 1.71
TTC3-225ENST00000540756 POLNQ7Z5Q5 900 aa25.71■■□□□ 1.71
TTC3-225ENST00000540756 HSPH1Q92598 858 aa25.71■■□□□ 1.71
TTC3-225ENST00000540756 FAM149B1Q96BN6 582 aa25.71■■□□□ 1.71
TTC3-225ENST00000540756 TMEM106CQ9BVX2 250 aa25.71■■□□□ 1.71
TTC3-225ENST00000540756 CSNK1G1Q9HCP0 422 aa25.71■■□□□ 1.71
TTC3-225ENST00000540756 CHST7Q9NS84 486 aa25.71■■□□□ 1.71
TTC3-225ENST00000540756 TRAPPC3O43617 180 aa25.7■■□□□ 1.7
TTC3-225ENST00000540756 DEFB103AP81534 67 aa25.7■■□□□ 1.7
TTC3-225ENST00000540756 SNX1Q13596 522 aa25.7■■□□□ 1.7
TTC3-225ENST00000540756 ACAP1Q15027 740 aa25.7■■□□□ 1.7
TTC3-225ENST00000540756 CLUL1Q15846 466 aa25.7■■□□□ 1.7
TTC3-225ENST00000540756 HADHQ16836 314 aaKnown RBP25.7■■□□□ 1.7
TTC3-225ENST00000540756 SLC39A12Q504Y0 691 aa25.7■■□□□ 1.7
TTC3-225ENST00000540756 TMCO3Q6UWJ1 677 aa25.7■■□□□ 1.7
TTC3-225ENST00000540756 SPOCD1Q6ZMY3 1216 aa25.7■■□□□ 1.7
TTC3-225ENST00000540756 SIX6OS1Q8N1H7 587 aa25.7■■□□□ 1.7
TTC3-225ENST00000540756 TRIM51Q9BSJ1 452 aa25.7■■□□□ 1.7
TTC3-225ENST00000540756 SLITRK6Q9H5Y7 841 aa25.7■■□□□ 1.7
TTC3-225ENST00000540756 ARHGEF37A1IGU5 675 aa25.7■■□□□ 1.7
TTC3-225ENST00000540756 DGKIO75912 1065 aa25.7■■□□□ 1.7
TTC3-225ENST00000540756 USP17L7P0C7H9 530 aa25.7■■□□□ 1.7
TTC3-225ENST00000540756 CYP2F1P24903 491 aa25.7■■□□□ 1.7
TTC3-225ENST00000540756 PCK1P35558 622 aa25.7■■□□□ 1.7
TTC3-225ENST00000540756 HDAC4P56524 1084 aa25.7■■□□□ 1.7
TTC3-225ENST00000540756 PITX1P78337 314 aaPredicted RBP25.7■■□□□ 1.7
TTC3-225ENST00000540756 RAB41Q5JT25 222 aa25.7■■□□□ 1.7
TTC3-225ENST00000540756 BEND6Q5SZJ8 279 aaPredicted RBP25.7■■□□□ 1.7
TTC3-225ENST00000540756 SCYL2Q6P3W7 929 aa25.7■■□□□ 1.7
TTC3-225ENST00000540756 DEFB106AQ8N104 65 aa25.7■■□□□ 1.7
TTC3-225ENST00000540756 CASKIN2Q8WXE0 1202 aa25.7■■□□□ 1.7
TTC3-225ENST00000540756 GDAP1L1Q96MZ0 367 aa25.7■■□□□ 1.7
TTC3-225ENST00000540756 C11orf84Q9BUA3 381 aaPredicted RBP25.7■■□□□ 1.7
TTC3-225ENST00000540756 COLEC11Q9BWP8 271 aa25.7■■□□□ 1.7
TTC3-225ENST00000540756 MTUS1Q9ULD2 1270 aa25.7■■□□□ 1.7
TTC3-225ENST00000540756 CDKN2BP42772 138 aa25.69■■□□□ 1.7
TTC3-225ENST00000540756 CARSP49589 748 aaKnown RBP25.69■■□□□ 1.7
TTC3-225ENST00000540756 LTBP2Q14767 1821 aa25.69■■□□□ 1.7
TTC3-225ENST00000540756 DDX42Q86XP3 938 aaKnown RBP eCLIP25.69■■□□□ 1.7
TTC3-225ENST00000540756 RBM41Q96IZ5 413 aaKnown RBP25.69■■□□□ 1.7
TTC3-225ENST00000540756 MRPL9Q9BYD2 267 aaKnown RBP25.69■■□□□ 1.7
TTC3-225ENST00000540756 GDF3Q9NR23 364 aa25.69■■□□□ 1.7
TTC3-225ENST00000540756 YJEFN3A6XGL0 299 aa25.68■■□□□ 1.7
TTC3-225ENST00000540756 E7ENQ6 273 aa25.68■■□□□ 1.7
TTC3-225ENST00000540756 KRT7P08729 469 aa25.68■■□□□ 1.7
TTC3-225ENST00000540756 CYP1B1Q16678 543 aa25.68■■□□□ 1.7
TTC3-225ENST00000540756 FUT10Q6P4F1 479 aa25.68■■□□□ 1.7
TTC3-225ENST00000540756 CCDC137Q6PK04 289 aaKnown RBP25.68■■□□□ 1.7
TTC3-225ENST00000540756 LRRC43Q8N309 656 aa25.68■■□□□ 1.7
TTC3-225ENST00000540756 ZCWPW1Q9H0M4 648 aa25.68■■□□□ 1.7
TTC3-225ENST00000540756 ARFGAP3Q9NP61 516 aa25.68■■□□□ 1.7
TTC3-225ENST00000540756 GPATCH2LQ9NWQ4 482 aa25.68■■□□□ 1.7
TTC3-225ENST00000540756 DDX56Q9NY93 547 aaKnown RBP25.68■■□□□ 1.7
TTC3-225ENST00000540756 RAG1P15918 1043 aa25.68■■□□□ 1.7
TTC3-225ENST00000540756 SCNN1AP37088 669 aa25.68■■□□□ 1.7
TTC3-225ENST00000540756 DR1Q01658 176 aa25.68■■□□□ 1.7
TTC3-225ENST00000540756 EFHC1Q5JVL4 640 aa25.68■■□□□ 1.7
TTC3-225ENST00000540756 RTP2Q5QGT7 225 aa25.68■■□□□ 1.7
TTC3-225ENST00000540756 SYPL2Q5VXT5 272 aa25.68■■□□□ 1.7
TTC3-225ENST00000540756 RSPO2Q6UXX9 243 aaPredicted RBP25.68■■□□□ 1.7
TTC3-225ENST00000540756 STKLD1Q8NE28 680 aa25.68■■□□□ 1.7
TTC3-225ENST00000540756 IFT81Q8WYA0 676 aa25.68■■□□□ 1.7
TTC3-225ENST00000540756 PGLYRP2Q96PD5 576 aa25.68■■□□□ 1.7
TTC3-225ENST00000540756 TBCBQ99426 244 aa25.68■■□□□ 1.7
TTC3-225ENST00000540756 DDX23Q9BUQ8 820 aaKnown RBP25.68■■□□□ 1.7
TTC3-225ENST00000540756 MAGEB5Q9BZ81 275 aa25.68■■□□□ 1.7
TTC3-225ENST00000540756 CWH43Q9H720 699 aa25.68■■□□□ 1.7
TTC3-225ENST00000540756 hCG_1818297A0A087WSY0 165 aa25.67■■□□□ 1.7
TTC3-225ENST00000540756 SYN3O14994 580 aa25.67■■□□□ 1.7
TTC3-225ENST00000540756 KIAA0355O15063 1070 aa25.67■■□□□ 1.7
TTC3-225ENST00000540756 FYNP06241 537 aa25.67■■□□□ 1.7
TTC3-225ENST00000540756 EN2P19622 333 aaPredicted RBP25.67■■□□□ 1.7
TTC3-225ENST00000540756 KDELR1P24390 212 aa25.67■■□□□ 1.7
TTC3-225ENST00000540756 COILP38432 576 aaPredicted RBP25.67■■□□□ 1.7
TTC3-225ENST00000540756 PTGIRP43119 386 aa25.67■■□□□ 1.7
TTC3-225ENST00000540756 DCAF6Q58WW2 860 aa25.67■■□□□ 1.7
TTC3-225ENST00000540756 ODF2Q5BJF6 829 aa25.67■■□□□ 1.7
TTC3-225ENST00000540756 SPATA2LQ8IUW3 424 aaPredicted RBP25.67■■□□□ 1.7
TTC3-225ENST00000540756 CMASQ8NFW8 434 aaPredicted RBP25.67■■□□□ 1.7
TTC3-225ENST00000540756 CCDC26Q8TAB7 109 aa25.67■■□□□ 1.7
TTC3-225ENST00000540756 SCAMP5Q8TAC9 235 aa25.67■■□□□ 1.7
TTC3-225ENST00000540756 HNRNPLLQ8WVV9 542 aaKnown RBP25.67■■□□□ 1.7
TTC3-225ENST00000540756 ABI2Q9NYB9 513 aaPredicted RBP25.67■■□□□ 1.7
TTC3-225ENST00000540756 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.67■■□□□ 1.74e-10■■■□□ 14.8
TTC3-225ENST00000540756 HSF2BPO75031 334 aa25.66■■□□□ 1.7
TTC3-225ENST00000540756 TUBBP07437 444 aa25.66■■□□□ 1.7
TTC3-225ENST00000540756 FGFR3P22607 806 aa25.66■■□□□ 1.7
TTC3-225ENST00000540756 CHRNA3P32297 505 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms