RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 STK4Q13043 487 aa15□□□□□ -0.01
SNHG1-213ENST00000540725 NCOA4Q13772 614 aa15□□□□□ -0.01
SNHG1-213ENST00000540725 KIAA0895Q8NCT3 520 aa15□□□□□ -0.01
SNHG1-213ENST00000540725 OVCA2Q8WZ82 227 aa15□□□□□ -0.01
SNHG1-213ENST00000540725 ELMO3Q96BJ8 720 aa15□□□□□ -0.01
SNHG1-213ENST00000540725 TNIP3Q96KP6 325 aa15□□□□□ -0.01
SNHG1-213ENST00000540725 KCNK16Q96T55 309 aa15□□□□□ -0.01
SNHG1-213ENST00000540725 MED10Q9BTT4 135 aa15□□□□□ -0.01
SNHG1-213ENST00000540725 TPSD1Q9BZJ3 242 aa15□□□□□ -0.01
SNHG1-213ENST00000540725 VPS45Q9NRW7 570 aa15□□□□□ -0.01
SNHG1-213ENST00000540725 EXOC1Q9NV70 894 aa15□□□□□ -0.01
SNHG1-213ENST00000540725 DMAC2Q9NW81 257 aa15□□□□□ -0.01
SNHG1-213ENST00000540725 CFAP45Q9UL16 551 aa15□□□□□ -0.01
SNHG1-213ENST00000540725 MMP17Q9ULZ9 603 aa15□□□□□ -0.01
SNHG1-213ENST00000540725 CEP192Q8TEP8 1941 aa15□□□□□ -0.01
SNHG1-213ENST00000540725 ACTN4O43707 911 aaKnown RBP14.99□□□□□ -0.01
SNHG1-213ENST00000540725 VNN1O95497 513 aa14.99□□□□□ -0.01
SNHG1-213ENST00000540725 ADH1CP00326 375 aa14.99□□□□□ -0.01
SNHG1-213ENST00000540725 C4BPAP04003 597 aaKnown RBP14.99□□□□□ -0.01
SNHG1-213ENST00000540725 GBP1P32455 592 aa14.99□□□□□ -0.01
SNHG1-213ENST00000540725 SLC6A11P48066 632 aa14.99□□□□□ -0.01
SNHG1-213ENST00000540725 DNM1Q05193 864 aaKnown RBP14.99□□□□□ -0.01
SNHG1-213ENST00000540725 MESP2Q0VG99 397 aa14.99□□□□□ -0.01
SNHG1-213ENST00000540725 PKP1Q13835 747 aa14.99□□□□□ -0.01
SNHG1-213ENST00000540725 STPG1Q5TH74 334 aa14.99□□□□□ -0.01
SNHG1-213ENST00000540725 ANO7Q6IWH7 933 aa14.99□□□□□ -0.01
SNHG1-213ENST00000540725 RHBDF2Q6PJF5 856 aa14.99□□□□□ -0.01
SNHG1-213ENST00000540725 PAQR9Q6ZVX9 377 aa14.99□□□□□ -0.01
SNHG1-213ENST00000540725 RASSF3Q86WH2 238 aa14.99□□□□□ -0.01
SNHG1-213ENST00000540725 SLC9A9Q8IVB4 645 aa14.99□□□□□ -0.01
SNHG1-213ENST00000540725 CCDC33Q8N5R6 958 aa14.99□□□□□ -0.01
SNHG1-213ENST00000540725 SCAMP5Q8TAC9 235 aa14.99□□□□□ -0.01
SNHG1-213ENST00000540725 SMARCD1Q96GM5 515 aa14.99□□□□□ -0.01
SNHG1-213ENST00000540725 PNKPQ96T60 521 aa14.99□□□□□ -0.01
SNHG1-213ENST00000540725 SDCBP2Q9H190 292 aa14.99□□□□□ -0.01
SNHG1-213ENST00000540725 DMAP1Q9NPF5 467 aaPredicted RBP14.99□□□□□ -0.01
SNHG1-213ENST00000540725 RCOR1Q9UKL0 485 aa14.99□□□□□ -0.01
SNHG1-213ENST00000540725 INVSQ9Y283 1065 aa14.99□□□□□ -0.01
SNHG1-213ENST00000540725 ASCC3Q8N3C0 2202 aaKnown RBP14.99□□□□□ -0.01
SNHG1-213ENST00000540725 E2F8A0AVK6 867 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 TNFRSF10BO14763 440 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 TM4SF5O14894 197 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 COCHO43405 550 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 APODP05090 189 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 ADH5P11766 374 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 EIF2DP41214 584 aaKnown RBP14.98□□□□□ -0.01
SNHG1-213ENST00000540725 SLC5A3P53794 718 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 MRPS21P82921 87 aaKnown RBP14.98□□□□□ -0.01
SNHG1-213ENST00000540725 CREB5Q02930 508 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 CRY1Q16526 586 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 KMT5BQ4FZB7 885 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 USP39Q53GS9 565 aaKnown RBP14.98□□□□□ -0.01
SNHG1-213ENST00000540725 HECTD3Q5T447 861 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 TCEAL6Q6IPX3 200 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 ACOT1Q86TX2 421 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 C12orf40Q86WS4 652 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 SFTPA1Q8IWL2 248 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 TCEAL3Q969E4 200 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 PAGE5Q96GU1 130 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 ZFRQ96KR1 1074 aaKnown RBP14.98□□□□□ -0.01
SNHG1-213ENST00000540725 CNOT6LQ96LI5 555 aaKnown RBP14.98□□□□□ -0.01
SNHG1-213ENST00000540725 KCTD10Q9H3F6 313 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 KRT82Q9NSB4 513 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 IL37Q9NZH6 218 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 TBC1D14Q9P2M4 693 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 CHORDC1Q9UHD1 332 aaPredicted RBP14.98□□□□□ -0.01
SNHG1-213ENST00000540725 TNRC6BQ9UPQ9 1833 aaKnown RBP14.98□□□□□ -0.01
SNHG1-213ENST00000540725 BCLAF3A2AJT9 711 aaKnown RBP14.98□□□□□ -0.01
SNHG1-213ENST00000540725 AP1G2O75843 785 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 KAT7O95251 611 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 P4HA1P13674 534 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 DLG4P78352 724 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 KDSRQ06136 332 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 ZACNQ401N2 412 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 LY6G5CQ5SRR4 150 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 SNX30Q5VWJ9 437 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 PMS2CLQ68D20 193 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 C11orf74Q86VG3 221 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 FUKQ8N0W3 1084 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 ALLCQ8N6M5 410 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 MDGA1Q8NFP4 955 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 TMEM174Q8WUU8 243 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 OTUB2Q96DC9 234 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 CCSER2Q9H7U1 834 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 ARHGEF4Q9NR80 690 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 GMIPQ9P107 970 aa14.98□□□□□ -0.01
SNHG1-213ENST00000540725 FAM92AA1XBS5 289 aa14.97□□□□□ -0.01
SNHG1-213ENST00000540725 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.97□□□□□ -0.01
SNHG1-213ENST00000540725 PDXKO00764 312 aa14.97□□□□□ -0.01
SNHG1-213ENST00000540725 KLF8O95600 359 aaPredicted RBP14.97□□□□□ -0.01
SNHG1-213ENST00000540725 CAVIN2O95810 425 aa14.97□□□□□ -0.01
SNHG1-213ENST00000540725 NR3C1P04150 777 aa14.97□□□□□ -0.01
SNHG1-213ENST00000540725 ZDHHC11BP0C7U3 371 aa14.97□□□□□ -0.01
SNHG1-213ENST00000540725 CHRM1P11229 460 aaPredicted RBP14.97□□□□□ -0.01
SNHG1-213ENST00000540725 CCDC130P13994 396 aa14.97□□□□□ -0.01
SNHG1-213ENST00000540725 HNRNPLP14866 589 aaKnown RBP eCLIP14.97□□□□□ -0.01
SNHG1-213ENST00000540725 PFKFB1P16118 471 aa14.97□□□□□ -0.01
SNHG1-213ENST00000540725 TIE1P35590 1138 aa14.97□□□□□ -0.01
SNHG1-213ENST00000540725 TUBP50607 506 aa14.97□□□□□ -0.01
SNHG1-213ENST00000540725 ORC1Q13415 861 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms