RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 PSMG1O95456 288 aa12.81□□□□□ -0.36
NPC1-202ENST00000540608 ERBB2P04626 1255 aa12.81□□□□□ -0.36
NPC1-202ENST00000540608 HOXC6P09630 235 aa12.81□□□□□ -0.36
NPC1-202ENST00000540608 RARBP10826 455 aa12.81□□□□□ -0.36
NPC1-202ENST00000540608 NRLP54845 237 aa12.81□□□□□ -0.36
NPC1-202ENST00000540608 SLC26A11Q86WA9 606 aa12.81□□□□□ -0.36
NPC1-202ENST00000540608 PCYT2Q99447 389 aa12.81□□□□□ -0.36
NPC1-202ENST00000540608 CALN1Q9BXU9 219 aa12.81□□□□□ -0.36
NPC1-202ENST00000540608 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.81□□□□□ -0.364e-6■■■■□ 19.5
NPC1-202ENST00000540608 SPDYE16A6NNV3 312 aaPredicted RBP12.81□□□□□ -0.36
NPC1-202ENST00000540608 KRT36O76013 467 aa12.81□□□□□ -0.36
NPC1-202ENST00000540608 ENDOD1O94919 500 aa12.81□□□□□ -0.36
NPC1-202ENST00000540608 NOMO1Q15155 1222 aa12.81□□□□□ -0.36
NPC1-202ENST00000540608 DALRD3Q5D0E6 543 aaKnown RBP12.81□□□□□ -0.36
NPC1-202ENST00000540608 IRGCQ6NXR0 463 aa12.81□□□□□ -0.36
NPC1-202ENST00000540608 NRG4Q8WWG1 115 aa12.81□□□□□ -0.36
NPC1-202ENST00000540608 KCNK4Q9NYG8 393 aa12.81□□□□□ -0.36
NPC1-202ENST00000540608 NXF1Q9UBU9 619 aaKnown RBP12.81□□□□□ -0.36
NPC1-202ENST00000540608 FAM237BA0A1B0GVD1 139 aa12.81□□□□□ -0.36
NPC1-202ENST00000540608 COPEO14579 308 aa12.81□□□□□ -0.36
NPC1-202ENST00000540608 CAPN9O14815 690 aa12.81□□□□□ -0.36
NPC1-202ENST00000540608 TNNC2P02585 160 aa12.81□□□□□ -0.36
NPC1-202ENST00000540608 C1QAP02745 245 aa12.81□□□□□ -0.36
NPC1-202ENST00000540608 SESN3P58005 492 aa12.81□□□□□ -0.36
NPC1-202ENST00000540608 PRPF39Q86UA1 669 aaKnown RBP12.81□□□□□ -0.36
NPC1-202ENST00000540608 TRIM42Q8IWZ5 723 aa12.81□□□□□ -0.36
NPC1-202ENST00000540608 SLC4A11Q8NBS3 891 aa12.81□□□□□ -0.36
NPC1-202ENST00000540608 ZNF483Q8TF39 744 aaPredicted RBP12.81□□□□□ -0.36
NPC1-202ENST00000540608 WDR60Q8WVS4 1066 aa12.81□□□□□ -0.36
NPC1-202ENST00000540608 SCG3Q8WXD2 468 aaKnown RBP12.81□□□□□ -0.36
NPC1-202ENST00000540608 FAF2Q96CS3 445 aa12.81□□□□□ -0.36
NPC1-202ENST00000540608 MCRS1Q96EZ8 462 aa12.81□□□□□ -0.36
NPC1-202ENST00000540608 SRPK1Q96SB4 655 aaKnown RBP12.81□□□□□ -0.36
NPC1-202ENST00000540608 SYT15Q9BQS2 421 aa12.81□□□□□ -0.36
NPC1-202ENST00000540608 STX18Q9P2W9 335 aaKnown RBP12.81□□□□□ -0.36
NPC1-202ENST00000540608 LRCH1Q9Y2L9 728 aa12.81□□□□□ -0.36
NPC1-202ENST00000540608 C2orf71A6NGG8 1288 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 A8MXQ7 604 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 C19orf81C9J6K1 198 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 B4GALT4O60513 344 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 NPTXRO95502 500 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 GABRB2P47870 512 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 ANGEL2Q5VTE6 544 aaKnown RBP12.8□□□□□ -0.36
NPC1-202ENST00000540608 TMEM154Q6P9G4 183 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 NPNTQ6UXI9 565 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 TTC7BQ86TV6 843 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 ZC3H18Q86VM9 953 aaKnown RBP12.8□□□□□ -0.36
NPC1-202ENST00000540608 ARHGAP24Q8N264 748 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 FRMD8Q9BZ67 464 aaPredicted RBP12.8□□□□□ -0.36
NPC1-202ENST00000540608 YIPF3Q9GZM5 350 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 IQCGQ9H095 443 aaKnown RBP12.8□□□□□ -0.36
NPC1-202ENST00000540608 ASNSD1Q9NWL6 643 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 ZNF180Q9UJW8 692 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 PLLPQ9Y342 182 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 TRIM49D1C9J1S8 452 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 TBX10O75333 385 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 AVILO75366 819 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 KRT37O76014 449 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 SNRPAP09012 282 aaKnown RBP12.8□□□□□ -0.36
NPC1-202ENST00000540608 SKIP12755 728 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 RAP1GAPP47736 663 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 STAT5BP51692 787 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 RAP1GDS1P52306 607 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 HIRAP54198 1017 aaPredicted RBP12.8□□□□□ -0.36
NPC1-202ENST00000540608 MMRN1Q13201 1228 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 ZRSR2Q15696 482 aaKnown RBP12.8□□□□□ -0.36
NPC1-202ENST00000540608 FAM47CQ5HY64 1035 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 IER5Q5VY09 327 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 LRRC74BQ6ZQY2 392 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 CDHR3Q6ZTQ4 885 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 DNERQ8NFT8 737 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 STMN2Q93045 179 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 ANKRD36BP1Q96IX9 119 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 C7orf26Q96N11 449 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 BCO2Q9BYV7 579 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 NMUR2Q9GZQ4 415 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 ARHGEF4Q9NR80 690 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 TTLL3Q9Y4R7 772 aa12.8□□□□□ -0.36
NPC1-202ENST00000540608 CAPN14A8MX76 684 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 E5RJQ4 531 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 TRDMT1O14717 391 aaKnown RBP12.79□□□□□ -0.36
NPC1-202ENST00000540608 KIF3CO14782 793 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 MAGEC1O60732 1142 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 PRKCBP05771 671 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 SRGAP2CP0DJJ0 459 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 PGM1P36871 562 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 PEX19P40855 299 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 TUBP50607 506 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 AP1B1Q10567 949 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 TFDP2Q14188 446 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 LGSNQ5TDP6 509 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 APBB2Q92870 758 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 PEBP4Q96S96 227 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 USP29Q9HBJ7 922 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 PAK5Q9P286 719 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 ZNF212Q9UDV6 495 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 PPME1Q9Y570 386 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 I3L4J1 428 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 UPP2O95045 317 aa12.79□□□□□ -0.36
NPC1-202ENST00000540608 UBA1P22314 1058 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms