RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 AHDC1Q5TGY3 1603 aaPredicted RBP13.36□□□□□ -0.27
SFSWAP-209ENST00000540469 A0A088AWK7 358 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 MAGEA8P43361 318 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 NADK2Q4G0N4 442 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 DARS2Q6PI48 645 aaKnown RBP13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 TMEM179Q6ZVK1 233 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 HPS6Q86YV9 775 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 MZB1Q8WU39 189 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 SLC44A1Q8WWI5 657 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 JADE3Q92613 823 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 XAB2Q9HCS7 855 aaKnown RBP13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 SLC9A2Q9UBY0 812 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 PCSK1NQ9UHG2 260 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 DNAJC16Q9Y2G8 782 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 AVILO75366 819 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 ZMPSTE24O75844 475 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 STAM2O75886 525 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 DHRS4L1P0CG22 281 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 PSMA2P25787 234 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 MSLNQ13421 630 aaPredicted RBP13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 DCTN2Q13561 401 aaKnown RBP13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 PEX6Q13608 980 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 PLEKHA7Q6IQ23 1121 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 KYAT3Q6YP21 454 aaKnown RBP13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 TRIM67Q6ZTA4 783 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 GPD1LQ8N335 351 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 PPP4R1Q8TF05 950 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 RBM17Q96I25 401 aaKnown RBP13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 TRIM56Q9BRZ2 755 aaKnown RBP13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 DDX56Q9NY93 547 aaKnown RBP13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 HBS1LQ9Y450 684 aaKnown RBP13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 A0A0J9YVX5 310 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 H7C0C1 242 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 RBP3P10745 1247 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 ATP5OP48047 213 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 CYTH1Q15438 398 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 IGDCC3Q8IVU1 814 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 GALNT4Q8N4A0 578 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 NAT8LQ8N9F0 302 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 TTC13Q8NBP0 860 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 CDCA7Q9BWT1 371 aaPredicted RBP13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 PI4KBQ9UBF8 816 aa13.35□□□□□ -0.27
SFSWAP-209ENST00000540469 ATP9BO43861 1147 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 KRT38O76015 456 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 SRGAP2CP0DJJ0 459 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 SRGAP2BP0DMP2 458 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 MAPTP10636 758 aaKnown RBP13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 FDFT1P37268 417 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 ALDH1A3P47895 512 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 SERPINB8P50452 374 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 ATXN3P54252 364 aaPredicted RBP13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 HNRNPDQ14103 355 aaKnown RBP13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 CYP4A22Q5TCH4 519 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 DPY19L2Q6NUT2 758 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 UNC45BQ8IWX7 931 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 TMC2Q8TDI7 906 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 IMPG2Q9BZV3 1241 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 ZC3H7BQ9UGR2 993 aaKnown RBP13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 PLLPQ9Y342 182 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 FARP1Q9Y4F1 1045 aaPredicted RBP13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 RPS6KA4O75676 772 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 KLHL2O95198 593 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 SOX10P56693 466 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 PPIDQ08752 370 aaKnown RBP13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 TBL3Q12788 808 aaKnown RBP13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 HADHQ16836 314 aaKnown RBP13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 RARS2Q5T160 578 aaKnown RBP13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 FAXCQ5TGI0 409 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 KCTD6Q8NC69 237 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 HSPH1Q92598 858 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 ARHGEF1Q92888 912 aaKnown RBP13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 CCDC106Q9BWC9 280 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 THEGQ9P2T0 379 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 CCNL1Q9UK58 526 aaPredicted RBP13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 MYOCOSA0A1B0GUC4 107 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 DDTLA6NHG4 134 aaPredicted RBP13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 PMM2O15305 246 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 LYPLA1O75608 230 aaPredicted RBP13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 CDKN2BP42772 138 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 NPTX2P47972 431 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 LIG4P49917 911 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 SLC18A2Q05940 514 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 C1QBPQ07021 282 aaKnown RBP13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 CC2D2BQ6DHV5 1058 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 TSHZ1Q6ZSZ6 1077 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 DHRS4Q9BTZ2 278 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 CIDEBQ9UHD4 219 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 CDH22Q9UJ99 828 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 GMEB1Q9Y692 573 aa13.34□□□□□ -0.27
SFSWAP-209ENST00000540469 SPDYE16A6NNV3 312 aaPredicted RBP13.33□□□□□ -0.28
SFSWAP-209ENST00000540469 CALB1P05937 261 aa13.33□□□□□ -0.28
SFSWAP-209ENST00000540469 ACOT2P49753 483 aa13.33□□□□□ -0.28
SFSWAP-209ENST00000540469 XIAPP98170 497 aa13.33□□□□□ -0.28
SFSWAP-209ENST00000540469 SFSWAPQ12872 951 aaKnown RBP13.33□□□□□ -0.28
SFSWAP-209ENST00000540469 WDR78Q5VTH9 848 aa13.33□□□□□ -0.28
SFSWAP-209ENST00000540469 FAM91A1Q658Y4 838 aa13.33□□□□□ -0.28
SFSWAP-209ENST00000540469 FBXL19Q6PCT2 694 aa13.33□□□□□ -0.28
SFSWAP-209ENST00000540469 TRIML2Q8N7C3 387 aa13.33□□□□□ -0.28
SFSWAP-209ENST00000540469 GSDMBQ8TAX9 411 aa13.33□□□□□ -0.28
SFSWAP-209ENST00000540469 DCUN1D1Q96GG9 259 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms