RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 ZSWIM1Q9BR11 485 aa15.92■□□□□ 0.14
UBE3B-212ENST00000540230 CRACR2AQ9BSW2 395 aa15.92■□□□□ 0.14
UBE3B-212ENST00000540230 FAM124BQ9H5Z6 455 aaPredicted RBP15.92■□□□□ 0.14
UBE3B-212ENST00000540230 THG1LQ9NWX6 298 aaKnown RBP15.92■□□□□ 0.14
UBE3B-212ENST00000540230 OSER1Q9NX31 292 aa15.92■□□□□ 0.14
UBE3B-212ENST00000540230 CPQQ9Y646 472 aa15.92■□□□□ 0.14
UBE3B-212ENST00000540230 CACNA1IQ9P0X4 2223 aa15.92■□□□□ 0.14
UBE3B-212ENST00000540230 SPECC1L-ADORA2AF8WAN1 911 aa15.91■□□□□ 0.14
UBE3B-212ENST00000540230 GOLGA6L22H0YM25 854 aa15.91■□□□□ 0.14
UBE3B-212ENST00000540230 LEFTY2O00292 366 aa15.91■□□□□ 0.14
UBE3B-212ENST00000540230 COCHO43405 550 aa15.91■□□□□ 0.14
UBE3B-212ENST00000540230 NUBP1P53384 320 aa15.91■□□□□ 0.14
UBE3B-212ENST00000540230 PTPN5P54829 565 aa15.91■□□□□ 0.14
UBE3B-212ENST00000540230 SLC7A9P82251 487 aa15.91■□□□□ 0.14
UBE3B-212ENST00000540230 CETN1Q12798 172 aa15.91■□□□□ 0.14
UBE3B-212ENST00000540230 TPD52L1Q16890 204 aaPredicted RBP15.91■□□□□ 0.14
UBE3B-212ENST00000540230 GOLGA7BQ2TAP0 167 aa15.91■□□□□ 0.14
UBE3B-212ENST00000540230 SNX30Q5VWJ9 437 aa15.91■□□□□ 0.14
UBE3B-212ENST00000540230 GJB7Q6PEY0 223 aa15.91■□□□□ 0.14
UBE3B-212ENST00000540230 TMEM270Q6UE05 265 aa15.91■□□□□ 0.14
UBE3B-212ENST00000540230 PDZD8Q8NEN9 1154 aa15.91■□□□□ 0.14
UBE3B-212ENST00000540230 TFAP2BQ92481 460 aa15.91■□□□□ 0.14
UBE3B-212ENST00000540230 ZFRQ96KR1 1074 aaKnown RBP15.91■□□□□ 0.14
UBE3B-212ENST00000540230 PRRX2Q99811 253 aa15.91■□□□□ 0.14
UBE3B-212ENST00000540230 OSBPL6Q9BZF3 934 aa15.91■□□□□ 0.14
UBE3B-212ENST00000540230 NMUR1Q9HB89 426 aa15.91■□□□□ 0.14
UBE3B-212ENST00000540230 PNPLA8Q9NP80 782 aa15.91■□□□□ 0.14
UBE3B-212ENST00000540230 COMMD8Q9NX08 183 aa15.91■□□□□ 0.14
UBE3B-212ENST00000540230 TSPAN16Q9UKR8 245 aa15.91■□□□□ 0.14
UBE3B-212ENST00000540230 PCDHB4Q9Y5E5 795 aa15.91■□□□□ 0.14
UBE3B-212ENST00000540230 MAN2B1O00754 1011 aa15.9■□□□□ 0.14
UBE3B-212ENST00000540230 MBL2P11226 248 aaPredicted RBP15.9■□□□□ 0.14
UBE3B-212ENST00000540230 CD19P15391 556 aa15.9■□□□□ 0.14
UBE3B-212ENST00000540230 TCF3P15923 654 aa15.9■□□□□ 0.14
UBE3B-212ENST00000540230 PFKLP17858 780 aa15.9■□□□□ 0.14
UBE3B-212ENST00000540230 SLC9A1P19634 815 aa15.9■□□□□ 0.14
UBE3B-212ENST00000540230 ERCC5P28715 1186 aaPredicted RBP15.9■□□□□ 0.14
UBE3B-212ENST00000540230 KIF11P52732 1056 aa15.9■□□□□ 0.14
UBE3B-212ENST00000540230 YWHAEP62258 255 aaKnown RBP15.9■□□□□ 0.14
UBE3B-212ENST00000540230 RUNX3Q13761 415 aa15.9■□□□□ 0.14
UBE3B-212ENST00000540230 NAIF1Q69YI7 327 aaPredicted RBP15.9■□□□□ 0.14
UBE3B-212ENST00000540230 PIGZQ86VD9 579 aa15.9■□□□□ 0.14
UBE3B-212ENST00000540230 OSCP1Q8WVF1 389 aa15.9■□□□□ 0.14
UBE3B-212ENST00000540230 CLDN23Q96B33 292 aa15.9■□□□□ 0.14
UBE3B-212ENST00000540230 FAM122AQ96E09 287 aa15.9■□□□□ 0.14
UBE3B-212ENST00000540230 LINC00597Q9H2U6 94 aa15.9■□□□□ 0.14
UBE3B-212ENST00000540230 FBXO44Q9H4M3 255 aa15.9■□□□□ 0.14
UBE3B-212ENST00000540230 THAP9Q9H5L6 903 aa15.9■□□□□ 0.14
UBE3B-212ENST00000540230 SAMSN1Q9NSI8 373 aaKnown RBP15.9■□□□□ 0.14
UBE3B-212ENST00000540230 SCML2Q9UQR0 700 aa15.9■□□□□ 0.14
UBE3B-212ENST00000540230 O00370 1275 aa15.89■□□□□ 0.13
UBE3B-212ENST00000540230 TBX18O95935 607 aa15.89■□□□□ 0.13
UBE3B-212ENST00000540230 MTIF2P46199 727 aaKnown RBP15.89■□□□□ 0.13
UBE3B-212ENST00000540230 PDE6CP51160 858 aa15.89■□□□□ 0.13
UBE3B-212ENST00000540230 MLLT6P55198 1093 aaPredicted RBP15.89■□□□□ 0.13
UBE3B-212ENST00000540230 GCNT1Q02742 428 aa15.89■□□□□ 0.13
UBE3B-212ENST00000540230 PDE4CQ08493 712 aa15.89■□□□□ 0.13
UBE3B-212ENST00000540230 ANGPT1Q15389 498 aa15.89■□□□□ 0.13
UBE3B-212ENST00000540230 EML3Q32P44 896 aa15.89■□□□□ 0.13
UBE3B-212ENST00000540230 ITPRIPL2Q3MIP1 535 aa15.89■□□□□ 0.13
UBE3B-212ENST00000540230 SGO2Q562F6 1265 aa15.89■□□□□ 0.13
UBE3B-212ENST00000540230 HECTD3Q5T447 861 aa15.89■□□□□ 0.13
UBE3B-212ENST00000540230 CC2D1AQ6P1N0 951 aaPredicted RBP15.89■□□□□ 0.13
UBE3B-212ENST00000540230 ANKRD52Q8NB46 1076 aa15.89■□□□□ 0.13
UBE3B-212ENST00000540230 RBBP8NLQ8NC74 664 aaPredicted RBP15.89■□□□□ 0.13
UBE3B-212ENST00000540230 WBP2Q969T9 261 aa15.89■□□□□ 0.13
UBE3B-212ENST00000540230 C8orf33Q9H7E9 229 aaPredicted RBP15.89■□□□□ 0.13
UBE3B-212ENST00000540230 RBM12Q9NTZ6 932 aaKnown RBP15.89■□□□□ 0.13
UBE3B-212ENST00000540230 DUS2Q9NX74 493 aaKnown RBP15.89■□□□□ 0.13
UBE3B-212ENST00000540230 DACH1Q9UI36 760 aa15.89■□□□□ 0.13
UBE3B-212ENST00000540230 NUDT5Q9UKK9 219 aa15.89■□□□□ 0.13
UBE3B-212ENST00000540230 USP3Q9Y6I4 520 aa15.89■□□□□ 0.13
UBE3B-212ENST00000540230 A0A1W2PQH9 124 aa15.89■□□□□ 0.13
UBE3B-212ENST00000540230 TLR5O60602 858 aa15.89■□□□□ 0.13
UBE3B-212ENST00000540230 CHRNB1P11230 501 aa15.89■□□□□ 0.13
UBE3B-212ENST00000540230 VDRP11473 427 aa15.89■□□□□ 0.13
UBE3B-212ENST00000540230 BRD2P25440 801 aaKnown RBP15.89■□□□□ 0.13
UBE3B-212ENST00000540230 ZNF132P52740 706 aa15.89■□□□□ 0.13
UBE3B-212ENST00000540230 PON2Q15165 354 aa15.89■□□□□ 0.13
UBE3B-212ENST00000540230 MIIPQ5JXC2 388 aa15.89■□□□□ 0.13
UBE3B-212ENST00000540230 TRIM65Q6PJ69 517 aa15.89■□□□□ 0.13
UBE3B-212ENST00000540230 C11orf57Q6ZUT1 292 aaPredicted RBP15.89■□□□□ 0.13
UBE3B-212ENST00000540230 SCD5Q86SK9 330 aa15.89■□□□□ 0.13
UBE3B-212ENST00000540230 RALGPS2Q86X27 583 aaPredicted RBP15.89■□□□□ 0.13
UBE3B-212ENST00000540230 MAML2Q8IZL2 1156 aaPredicted RBP15.89■□□□□ 0.13
UBE3B-212ENST00000540230 UBA3Q8TBC4 463 aa15.89■□□□□ 0.13
UBE3B-212ENST00000540230 NELL2Q99435 816 aa15.89■□□□□ 0.13
UBE3B-212ENST00000540230 DNAI2Q9GZS0 605 aa15.89■□□□□ 0.13
UBE3B-212ENST00000540230 TLR8Q9NR97 1041 aaKnown RBP15.89■□□□□ 0.13
UBE3B-212ENST00000540230 TMEM63CQ9P1W3 806 aa15.89■□□□□ 0.13
UBE3B-212ENST00000540230 CFAP97Q9P2B7 532 aa15.89■□□□□ 0.13
UBE3B-212ENST00000540230 AJAP1Q9UKB5 411 aaPredicted RBP15.89■□□□□ 0.13
UBE3B-212ENST00000540230 MRPS17Q9Y2R5 130 aaKnown RBP15.89■□□□□ 0.13
UBE3B-212ENST00000540230 MDM4O15151 490 aa15.88■□□□□ 0.13
UBE3B-212ENST00000540230 PAEPP09466 180 aa15.88■□□□□ 0.13
UBE3B-212ENST00000540230 IFNAR2P48551 515 aa15.88■□□□□ 0.13
UBE3B-212ENST00000540230 TUBP50607 506 aa15.88■□□□□ 0.13
UBE3B-212ENST00000540230 BCAT1P54687 386 aa15.88■□□□□ 0.13
UBE3B-212ENST00000540230 GAS6Q14393 721 aa15.88■□□□□ 0.13
UBE3B-212ENST00000540230 PDGFRLQ15198 375 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms