RNA–Protein interactions for RNA: ENST00000540080.5

CLTA-210, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-210ENST00000540080 RIN3Q8TB24 985 aa24.32■■□□□ 1.48
CLTA-210ENST00000540080 DNASE1L2Q92874 299 aa24.32■■□□□ 1.48
CLTA-210ENST00000540080 UBXN6Q9BZV1 441 aa24.32■■□□□ 1.48
CLTA-210ENST00000540080 AJAP1Q9UKB5 411 aaPredicted RBP24.32■■□□□ 1.48
CLTA-210ENST00000540080 ANAPC1Q9H1A4 1944 aa24.31■■□□□ 1.48
CLTA-210ENST00000540080 ZDHHC11BP0C7U3 371 aa24.31■■□□□ 1.48
CLTA-210ENST00000540080 PFKLP17858 780 aa24.31■■□□□ 1.48
CLTA-210ENST00000540080 BST2Q10589 180 aaKnown RBP24.31■■□□□ 1.48
CLTA-210ENST00000540080 CNGA2Q16280 664 aa24.31■■□□□ 1.48
CLTA-210ENST00000540080 HECTD3Q5T447 861 aa24.31■■□□□ 1.48
CLTA-210ENST00000540080 SNX30Q5VWJ9 437 aa24.31■■□□□ 1.48
CLTA-210ENST00000540080 ANKRD20A12PQ8NF67 263 aa24.31■■□□□ 1.48
CLTA-210ENST00000540080 FUCA2Q9BTY2 467 aa24.31■■□□□ 1.48
CLTA-210ENST00000540080 CCSER2Q9H7U1 834 aa24.31■■□□□ 1.48
CLTA-210ENST00000540080 TBC1D17Q9HA65 648 aa24.31■■□□□ 1.48
CLTA-210ENST00000540080 TLR8Q9NR97 1041 aaKnown RBP24.31■■□□□ 1.48
CLTA-210ENST00000540080 GKN1Q9NS71 199 aa24.31■■□□□ 1.48
CLTA-210ENST00000540080 SMPD4Q9NXE4 827 aa24.31■■□□□ 1.48
CLTA-210ENST00000540080 ARHGAP26Q9UNA1 814 aa24.31■■□□□ 1.48
CLTA-210ENST00000540080 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.31■■□□□ 1.48
CLTA-210ENST00000540080 XPO1O14980 1071 aaKnown RBP24.3■■□□□ 1.48
CLTA-210ENST00000540080 MBL2P11226 248 aaPredicted RBP24.3■■□□□ 1.48
CLTA-210ENST00000540080 VCPP55072 806 aaKnown RBP24.3■■□□□ 1.48
CLTA-210ENST00000540080 CC2D1AQ6P1N0 951 aaPredicted RBP24.3■■□□□ 1.48
CLTA-210ENST00000540080 TTC8Q8TAM2 541 aa24.3■■□□□ 1.48
CLTA-210ENST00000540080 CSGALNACT1Q8TDX6 532 aa24.3■■□□□ 1.48
CLTA-210ENST00000540080 SH3RF2Q8TEC5 729 aa24.3■■□□□ 1.48
CLTA-210ENST00000540080 SHDQ96IW2 340 aa24.3■■□□□ 1.48
CLTA-210ENST00000540080 BPIFA3Q9BQP9 254 aa24.3■■□□□ 1.48
CLTA-210ENST00000540080 LSM14BQ9BX40 385 aaKnown RBP24.3■■□□□ 1.48
CLTA-210ENST00000540080 HSD3B7Q9H2F3 369 aa24.3■■□□□ 1.48
CLTA-210ENST00000540080 ACP6Q9NPH0 428 aa24.3■■□□□ 1.48
CLTA-210ENST00000540080 LIMA1Q9UHB6 759 aaKnown RBP24.3■■□□□ 1.48
CLTA-210ENST00000540080 PATJQ8NI35 1801 aa24.29■■□□□ 1.48
CLTA-210ENST00000540080 BECN2A8MW95 431 aa24.29■■□□□ 1.48
CLTA-210ENST00000540080 M0QYV0 167 aa24.29■■□□□ 1.48
CLTA-210ENST00000540080 ARNTLO00327 626 aa24.29■■□□□ 1.48
CLTA-210ENST00000540080 COCHO43405 550 aa24.29■■□□□ 1.48
CLTA-210ENST00000540080 OLFM2O95897 454 aa24.29■■□□□ 1.48
CLTA-210ENST00000540080 ZNF18P17022 549 aa24.29■■□□□ 1.48
CLTA-210ENST00000540080 CD72P21854 359 aa24.29■■□□□ 1.48
CLTA-210ENST00000540080 ZNF165P49910 485 aa24.29■■□□□ 1.48
CLTA-210ENST00000540080 COPB1P53618 953 aaKnown RBP24.29■■□□□ 1.48
CLTA-210ENST00000540080 STARD6P59095 220 aa24.29■■□□□ 1.48
CLTA-210ENST00000540080 SLC7A9P82251 487 aa24.29■■□□□ 1.48
CLTA-210ENST00000540080 ZXDBP98169 803 aa24.29■■□□□ 1.48
CLTA-210ENST00000540080 PRKCQQ04759 706 aa24.29■■□□□ 1.48
CLTA-210ENST00000540080 STILQ15468 1287 aa24.29■■□□□ 1.48
CLTA-210ENST00000540080 ZNF77Q15935 545 aa24.29■■□□□ 1.48
CLTA-210ENST00000540080 SKOR2Q2VWA4 1001 aaPredicted RBP24.29■■□□□ 1.48
CLTA-210ENST00000540080 PKDCCQ504Y2 493 aa24.29■■□□□ 1.48
CLTA-210ENST00000540080 CWF19L1Q69YN2 538 aaKnown RBP24.29■■□□□ 1.48
CLTA-210ENST00000540080 ASTLQ6HA08 431 aaPredicted RBP24.29■■□□□ 1.48
CLTA-210ENST00000540080 DPY19L2P1Q6NXN4 242 aa24.29■■□□□ 1.48
CLTA-210ENST00000540080 TPRG1Q6ZUI0 275 aa24.29■■□□□ 1.48
CLTA-210ENST00000540080 DHX40Q8IX18 779 aaKnown RBP24.29■■□□□ 1.48
CLTA-210ENST00000540080 SHC3Q92529 594 aa24.29■■□□□ 1.48
CLTA-210ENST00000540080 SECISBP2LQ93073 1101 aaKnown RBP24.29■■□□□ 1.48
CLTA-210ENST00000540080 TRPV5Q9NQA5 729 aa24.29■■□□□ 1.48
CLTA-210ENST00000540080 GTSE1Q9NYZ3 720 aa24.29■■□□□ 1.48
CLTA-210ENST00000540080 CPQQ9Y646 472 aa24.29■■□□□ 1.48
CLTA-210ENST00000540080 USP3Q9Y6I4 520 aa24.29■■□□□ 1.48
CLTA-210ENST00000540080 COL4A3Q01955 1670 aa24.28■■□□□ 1.48
CLTA-210ENST00000540080 A0A1W2PQH9 124 aa24.28■■□□□ 1.48
CLTA-210ENST00000540080 LEFTY2O00292 366 aa24.28■■□□□ 1.48
CLTA-210ENST00000540080 SETSIPP0DME0 302 aa24.28■■□□□ 1.48
CLTA-210ENST00000540080 AVPR2P30518 371 aa24.28■■□□□ 1.48
CLTA-210ENST00000540080 TKTL1P51854 596 aa24.28■■□□□ 1.48
CLTA-210ENST00000540080 PLCB2Q00722 1185 aa24.28■■□□□ 1.48
CLTA-210ENST00000540080 TNK2Q07912 1038 aa24.28■■□□□ 1.48
CLTA-210ENST00000540080 MTF1Q14872 753 aa24.28■■□□□ 1.48
CLTA-210ENST00000540080 RAB41Q5JT25 222 aa24.28■■□□□ 1.48
CLTA-210ENST00000540080 FKBP15Q5T1M5 1219 aa24.28■■□□□ 1.48
CLTA-210ENST00000540080 KLHDC7AQ5VTJ3 777 aa24.28■■□□□ 1.48
CLTA-210ENST00000540080 TRIM68Q6AZZ1 485 aa24.28■■□□□ 1.48
CLTA-210ENST00000540080 CCDC186Q7Z3E2 898 aa24.28■■□□□ 1.48
CLTA-210ENST00000540080 FOXQ1Q9C009 403 aa24.28■■□□□ 1.48
CLTA-210ENST00000540080 NACA2Q9H009 215 aa24.28■■□□□ 1.48
CLTA-210ENST00000540080 NMUR1Q9HB89 426 aa24.28■■□□□ 1.48
CLTA-210ENST00000540080 LRRC4Q9HBW1 653 aa24.28■■□□□ 1.48
CLTA-210ENST00000540080 OSER1Q9NX31 292 aa24.28■■□□□ 1.48
CLTA-210ENST00000540080 SMTNL1A8MU46 457 aa24.27■■□□□ 1.48
CLTA-210ENST00000540080 FOXN3O00409 490 aaPredicted RBP24.27■■□□□ 1.48
CLTA-210ENST00000540080 THAP12O43422 761 aa24.27■■□□□ 1.48
CLTA-210ENST00000540080 PI15O43692 258 aa24.27■■□□□ 1.48
CLTA-210ENST00000540080 TLR5O60602 858 aa24.27■■□□□ 1.48
CLTA-210ENST00000540080 PNMA6AP0CW24 399 aaPredicted RBP24.27■■□□□ 1.48
CLTA-210ENST00000540080 ATP1A3P13637 1013 aa24.27■■□□□ 1.48
CLTA-210ENST00000540080 GNA15P30679 374 aa24.27■■□□□ 1.48
CLTA-210ENST00000540080 PLA2G4AP47712 749 aa24.27■■□□□ 1.48
CLTA-210ENST00000540080 KLK7P49862 253 aa24.27■■□□□ 1.48
CLTA-210ENST00000540080 TUBP50607 506 aa24.27■■□□□ 1.48
CLTA-210ENST00000540080 CLCN5P51795 746 aa24.27■■□□□ 1.48
CLTA-210ENST00000540080 KPNA1P52294 538 aaPredicted RBP24.27■■□□□ 1.48
CLTA-210ENST00000540080 USP4Q13107 963 aa24.27■■□□□ 1.48
CLTA-210ENST00000540080 RAPGEF1Q13905 1077 aa24.27■■□□□ 1.48
CLTA-210ENST00000540080 SCD5Q86SK9 330 aa24.27■■□□□ 1.48
CLTA-210ENST00000540080 TMEM105Q8N8V8 129 aa24.27■■□□□ 1.48
CLTA-210ENST00000540080 FAM83CQ9BQN1 747 aa24.27■■□□□ 1.48
CLTA-210ENST00000540080 NAGPAQ9UK23 515 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms