RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 RSPH1Q8WYR4 309 aa23.49■■□□□ 1.35
HOMER3-204ENST00000539827 MED4Q9NPJ6 270 aa23.49■■□□□ 1.35
HOMER3-204ENST00000539827 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.49■■□□□ 1.35
HOMER3-204ENST00000539827 FAN1Q9Y2M0 1017 aa23.49■■□□□ 1.35
HOMER3-204ENST00000539827 CST8O60676 142 aa23.49■■□□□ 1.35
HOMER3-204ENST00000539827 HSD17B3P37058 310 aa23.49■■□□□ 1.35
HOMER3-204ENST00000539827 SCNN1AP37088 669 aa23.49■■□□□ 1.35
HOMER3-204ENST00000539827 VPS41P49754 854 aa23.49■■□□□ 1.35
HOMER3-204ENST00000539827 CDH6P55285 790 aa23.49■■□□□ 1.35
HOMER3-204ENST00000539827 MMRN1Q13201 1228 aa23.49■■□□□ 1.35
HOMER3-204ENST00000539827 BFSP2Q13515 415 aa23.49■■□□□ 1.35
HOMER3-204ENST00000539827 GPNMBQ14956 572 aa23.49■■□□□ 1.35
HOMER3-204ENST00000539827 UAP1Q16222 522 aaPredicted RBP23.49■■□□□ 1.35
HOMER3-204ENST00000539827 TMC3Q7Z5M5 1100 aa23.49■■□□□ 1.35
HOMER3-204ENST00000539827 IQCKQ8N0W5 287 aa23.49■■□□□ 1.35
HOMER3-204ENST00000539827 SMOQ99835 787 aa23.49■■□□□ 1.35
HOMER3-204ENST00000539827 CALN1Q9BXU9 219 aa23.49■■□□□ 1.35
HOMER3-204ENST00000539827 LRRC4Q9HBW1 653 aa23.49■■□□□ 1.35
HOMER3-204ENST00000539827 PAK6Q9NQU5 681 aaPredicted RBP23.49■■□□□ 1.35
HOMER3-204ENST00000539827 PCSK1P29120 753 aa23.48■■□□□ 1.35
HOMER3-204ENST00000539827 CACNA2D1P54289 1103 aa23.48■■□□□ 1.35
HOMER3-204ENST00000539827 ADCY1Q08828 1119 aa23.48■■□□□ 1.35
HOMER3-204ENST00000539827 NOMO2Q5JPE7 1267 aa23.48■■□□□ 1.35
HOMER3-204ENST00000539827 GSTA5Q7RTV2 222 aa23.48■■□□□ 1.35
HOMER3-204ENST00000539827 MYCBPAPQ8TBZ2 947 aa23.48■■□□□ 1.35
HOMER3-204ENST00000539827 RUFY1Q96T51 708 aa23.48■■□□□ 1.35
HOMER3-204ENST00000539827 ADAM33Q9BZ11 813 aa23.48■■□□□ 1.35
HOMER3-204ENST00000539827 SAE1Q9UBE0 346 aaPredicted RBP23.48■■□□□ 1.35
HOMER3-204ENST00000539827 M0QZQ0 153 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 DESP17661 470 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 PTPN9P43378 593 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 ATXN1P54253 815 aaKnown RBP23.47■■□□□ 1.35
HOMER3-204ENST00000539827 GYS2P54840 703 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 HDAC4P56524 1084 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 BYSLQ13895 437 aaKnown RBP23.47■■□□□ 1.35
HOMER3-204ENST00000539827 EFHC1Q5JVL4 640 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 DBF4BQ8NFT6 615 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 URGCPQ8TCY9 931 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 UBLCP1Q8WVY7 318 aaPredicted RBP23.47■■□□□ 1.35
HOMER3-204ENST00000539827 KCTD13Q8WZ19 329 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 ART4Q93070 314 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 FAM149B1Q96BN6 582 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 RHOBTB2Q9BYZ6 727 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 RNF208Q9H0X6 261 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.47■■□□□ 1.35
HOMER3-204ENST00000539827 ZNF148Q9UQR1 794 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 EFR3BQ9Y2G0 817 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 NEU2Q9Y3R4 380 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 TSC2P49815 1807 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 KRT14P02533 472 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 CYP11A1P05108 521 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 CCL5P13501 91 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 GBP1P32455 592 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 ARSEP51690 589 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 ZC3H12AQ5D1E8 599 aaKnown RBP23.47■■□□□ 1.35
HOMER3-204ENST00000539827 BBS12Q6ZW61 710 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 ZNF365Q70YC5 407 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 DEFB106AQ8N104 65 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 MYLPFQ96A32 169 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 TMEM209Q96SK2 561 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 KCNK16Q96T55 309 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 DDX23Q9BUQ8 820 aaKnown RBP23.47■■□□□ 1.35
HOMER3-204ENST00000539827 FTHL17Q9BXU8 183 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 TMEM30AQ9NV96 361 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 VPS18Q9P253 973 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 PLAAQ9Y263 795 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 ATP8A1Q9Y2Q0 1164 aa23.47■■□□□ 1.35
HOMER3-204ENST00000539827 PQBP1O60828 265 aaKnown RBP23.46■■□□□ 1.35
HOMER3-204ENST00000539827 TKTL1P51854 596 aa23.46■■□□□ 1.35
HOMER3-204ENST00000539827 MRPS5P82675 430 aaKnown RBP23.46■■□□□ 1.35
HOMER3-204ENST00000539827 OTUD4Q01804 1114 aaKnown RBP23.46■■□□□ 1.35
HOMER3-204ENST00000539827 KRT81Q14533 505 aa23.46■■□□□ 1.35
HOMER3-204ENST00000539827 SIX6OS1Q8N1H7 587 aa23.46■■□□□ 1.35
HOMER3-204ENST00000539827 ZMIZ2Q8NF64 920 aa23.46■■□□□ 1.35
HOMER3-204ENST00000539827 SUSD3Q96L08 255 aa23.46■■□□□ 1.35
HOMER3-204ENST00000539827 TBCBQ99426 244 aa23.46■■□□□ 1.35
HOMER3-204ENST00000539827 BEGAINQ9BUH8 593 aa23.46■■□□□ 1.35
HOMER3-204ENST00000539827 SNRNP25Q9BV90 132 aaKnown RBP23.46■■□□□ 1.35
HOMER3-204ENST00000539827 ENPP3O14638 875 aa23.45■■□□□ 1.35
HOMER3-204ENST00000539827 RNF40O75150 1001 aa23.45■■□□□ 1.35
HOMER3-204ENST00000539827 ENDOD1O94919 500 aa23.45■■□□□ 1.35
HOMER3-204ENST00000539827 ATF2P15336 505 aa23.45■■□□□ 1.35
HOMER3-204ENST00000539827 IVDP26440 423 aa23.45■■□□□ 1.35
HOMER3-204ENST00000539827 ADCY8P40145 1251 aa23.45■■□□□ 1.35
HOMER3-204ENST00000539827 ATN1P54259 1190 aaPredicted RBP23.45■■□□□ 1.35
HOMER3-204ENST00000539827 VCPP55072 806 aaKnown RBP23.45■■□□□ 1.35
HOMER3-204ENST00000539827 CALCOCO2Q13137 446 aa23.45■■□□□ 1.35
HOMER3-204ENST00000539827 DPYSL3Q14195 570 aa23.45■■□□□ 1.35
HOMER3-204ENST00000539827 CA9Q16790 459 aa23.45■■□□□ 1.35
HOMER3-204ENST00000539827 BOLA3Q53S33 107 aa23.45■■□□□ 1.35
HOMER3-204ENST00000539827 DRICH1Q6PGQ1 229 aaPredicted RBP23.45■■□□□ 1.35
HOMER3-204ENST00000539827 ACTL9Q8TC94 416 aa23.45■■□□□ 1.35
HOMER3-204ENST00000539827 SNF8Q96H20 258 aa23.45■■□□□ 1.35
HOMER3-204ENST00000539827 ACBD6Q9BR61 282 aa23.45■■□□□ 1.35
HOMER3-204ENST00000539827 C11orf84Q9BUA3 381 aaPredicted RBP23.45■■□□□ 1.35
HOMER3-204ENST00000539827 SEZ6LQ9BYH1 1024 aa23.45■■□□□ 1.35
HOMER3-204ENST00000539827 TXLNGYQ9BZA5 131 aa23.45■■□□□ 1.35
HOMER3-204ENST00000539827 TBC1D13Q9NVG8 400 aa23.45■■□□□ 1.35
HOMER3-204ENST00000539827 TMLHEQ9NVH6 421 aa23.45■■□□□ 1.35
HOMER3-204ENST00000539827 WHRNQ9P202 907 aa23.45■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms