RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 CES5AQ6NT32 575 aa13.7□□□□□ -0.22
CCDC42-202ENST00000539522 DNAAF5Q86Y56 855 aa13.7□□□□□ -0.22
CCDC42-202ENST00000539522 NPAS3Q8IXF0 933 aa13.7□□□□□ -0.22
CCDC42-202ENST00000539522 TC2NQ8N9U0 490 aa13.7□□□□□ -0.22
CCDC42-202ENST00000539522 CCDC112Q8NEF3 446 aa13.7□□□□□ -0.22
CCDC42-202ENST00000539522 OR8K1Q8NGG5 319 aa13.7□□□□□ -0.22
CCDC42-202ENST00000539522 SLC30A5Q8TAD4 765 aa13.7□□□□□ -0.22
CCDC42-202ENST00000539522 RIN3Q8TB24 985 aa13.7□□□□□ -0.22
CCDC42-202ENST00000539522 KHSRPQ92945 711 aaKnown RBP eCLIP13.7□□□□□ -0.22
CCDC42-202ENST00000539522 ASB2Q96Q27 587 aa13.7□□□□□ -0.22
CCDC42-202ENST00000539522 DNAJC7Q99615 494 aa13.7□□□□□ -0.22
CCDC42-202ENST00000539522 HAUS4Q9H6D7 363 aa13.7□□□□□ -0.22
CCDC42-202ENST00000539522 TAS2R14Q9NYV8 317 aa13.7□□□□□ -0.22
CCDC42-202ENST00000539522 ARHGAP20Q9P2F6 1191 aa13.7□□□□□ -0.22
CCDC42-202ENST00000539522 NENFQ9UMX5 172 aa13.7□□□□□ -0.22
CCDC42-202ENST00000539522 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.7□□□□□ -0.22
CCDC42-202ENST00000539522 A0A0C4DFX4 3053 aa13.7□□□□□ -0.22
CCDC42-202ENST00000539522 C2orf78A6NCI8 922 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 ZNF840PA6NDX5 716 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 SPDYE4A6NLX3 237 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 C2CD4DB7Z1M9 353 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 DDX3XO00571 662 aaKnown RBP eCLIP13.69□□□□□ -0.22
CCDC42-202ENST00000539522 PAPSS1O43252 624 aaPredicted RBP13.69□□□□□ -0.22
CCDC42-202ENST00000539522 MFAP3LO75121 409 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 ERBB2P04626 1255 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 FYNP06241 537 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 USP17L7P0C7H9 530 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 FERP16591 822 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 SP100P23497 879 aaPredicted RBP13.69□□□□□ -0.22
CCDC42-202ENST00000539522 FSHRP23945 695 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 FCARP24071 287 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 KRT9P35527 623 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 PDE6CP51160 858 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 TKTL1P51854 596 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 ADIGQ0VDE8 80 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 IFRD2Q12894 506 aaPredicted RBP13.69□□□□□ -0.22
CCDC42-202ENST00000539522 PDCLQ13371 301 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 C2CD6Q53TS8 623 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 SFMBT2Q5VUG0 894 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 PM20D1Q6GTS8 502 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 HFE2Q6ZVN8 426 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 TMEM110Q86TL2 294 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 ZSCAN30Q86W11 494 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 SYN2Q92777 582 aaPredicted RBP13.69□□□□□ -0.22
CCDC42-202ENST00000539522 FGF13Q92913 245 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 RSPRY1Q96DX4 576 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 RIPOR3Q96MK2 946 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 AGPAT1Q99943 283 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 SLC46A2Q9BY10 475 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 ULBP1Q9BZM6 244 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 NUCKS1Q9H1E3 243 aaKnown RBP13.69□□□□□ -0.22
CCDC42-202ENST00000539522 PIDD1Q9HB75 910 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 CD320Q9NPF0 282 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 ASAH2Q9NR71 780 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 GMIPQ9P107 970 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 HESX1Q9UBX0 185 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 CHORDC1Q9UHD1 332 aaPredicted RBP13.69□□□□□ -0.22
CCDC42-202ENST00000539522 SCML2Q9UQR0 700 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 ZKSCAN5Q9Y2L8 839 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 COL4A2P08572 1712 aa13.69□□□□□ -0.22
CCDC42-202ENST00000539522 LOC730098B7Z3J9 87 aa13.68□□□□□ -0.22
CCDC42-202ENST00000539522 E5RJQ4 531 aa13.68□□□□□ -0.22
CCDC42-202ENST00000539522 MED7O43513 233 aa13.68□□□□□ -0.22
CCDC42-202ENST00000539522 ANXA13P27216 316 aa13.68□□□□□ -0.22
CCDC42-202ENST00000539522 YWHAQP27348 245 aa13.68□□□□□ -0.22
CCDC42-202ENST00000539522 BPIFB4P59827 614 aa13.68□□□□□ -0.22
CCDC42-202ENST00000539522 VEPH1Q14D04 833 aa13.68□□□□□ -0.22
CCDC42-202ENST00000539522 TAF5Q15542 800 aa13.68□□□□□ -0.22
CCDC42-202ENST00000539522 ASIC2Q16515 512 aa13.68□□□□□ -0.22
CCDC42-202ENST00000539522 ASTE1Q2TB18 679 aaPredicted RBP13.68□□□□□ -0.22
CCDC42-202ENST00000539522 SNX30Q5VWJ9 437 aa13.68□□□□□ -0.22
CCDC42-202ENST00000539522 TXNDC8Q6A555 127 aa13.68□□□□□ -0.22
CCDC42-202ENST00000539522 ELMSAN1Q6PJG2 1045 aa13.68□□□□□ -0.22
CCDC42-202ENST00000539522 PDZD4Q76G19 769 aaPredicted RBP13.68□□□□□ -0.22
CCDC42-202ENST00000539522 GET4Q7L5D6 327 aaPredicted RBP13.68□□□□□ -0.22
CCDC42-202ENST00000539522 ITIH5Q86UX2 942 aa13.68□□□□□ -0.22
CCDC42-202ENST00000539522 STK32AQ8WU08 396 aa13.68□□□□□ -0.22
CCDC42-202ENST00000539522 ATXN2LQ8WWM7 1075 aaKnown RBP13.68□□□□□ -0.22
CCDC42-202ENST00000539522 NECTIN4Q96NY8 510 aa13.68□□□□□ -0.22
CCDC42-202ENST00000539522 LRRC3BQ96PB8 259 aa13.68□□□□□ -0.22
CCDC42-202ENST00000539522 CHP1Q99653 195 aa13.68□□□□□ -0.22
CCDC42-202ENST00000539522 RNF38Q9H0F5 515 aa13.68□□□□□ -0.22
CCDC42-202ENST00000539522 KCNF1Q9H3M0 494 aa13.68□□□□□ -0.22
CCDC42-202ENST00000539522 ABHD10Q9NUJ1 306 aa13.68□□□□□ -0.22
CCDC42-202ENST00000539522 COL4A3Q01955 1670 aa13.68□□□□□ -0.22
CCDC42-202ENST00000539522 A0A1W2PQH9 124 aa13.67□□□□□ -0.22
CCDC42-202ENST00000539522 C19orf67A6NJJ6 358 aa13.67□□□□□ -0.22
CCDC42-202ENST00000539522 YJEFN3A6XGL0 299 aa13.67□□□□□ -0.22
CCDC42-202ENST00000539522 E7ENQ6 273 aa13.67□□□□□ -0.22
CCDC42-202ENST00000539522 RTN3O95197 1032 aaPredicted RBP13.67□□□□□ -0.22
CCDC42-202ENST00000539522 PRAMEF12O95522 483 aa13.67□□□□□ -0.22
CCDC42-202ENST00000539522 OLFM2O95897 454 aa13.67□□□□□ -0.22
CCDC42-202ENST00000539522 OAS1P00973 400 aaKnown RBP13.67□□□□□ -0.22
CCDC42-202ENST00000539522 LCP1P13796 627 aa13.67□□□□□ -0.22
CCDC42-202ENST00000539522 DAOAP59103 153 aa13.67□□□□□ -0.22
CCDC42-202ENST00000539522 MRPS5P82675 430 aaKnown RBP13.67□□□□□ -0.22
CCDC42-202ENST00000539522 ZP2Q05996 745 aa13.67□□□□□ -0.22
CCDC42-202ENST00000539522 CLEC16AQ2KHT3 1053 aa13.67□□□□□ -0.22
CCDC42-202ENST00000539522 NAA35Q5VZE5 725 aa13.67□□□□□ -0.22
CCDC42-202ENST00000539522 ZNF677Q86XU0 584 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms