RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 ANKRD20A12PQ8NF67 263 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 SLC35F5Q8WV83 523 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 ZFYVE19Q96K21 471 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 SLITRK1Q96PX8 696 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 ERGIC2Q96RQ1 377 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 DNAI2Q9GZS0 605 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 CCSER2Q9H7U1 834 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 PNPLA8Q9NP80 782 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 NLRC4Q9NPP4 1024 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 SCML2Q9UQR0 700 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 FAM170AA1A519 330 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 THAP12O43422 761 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 TBX18O95935 607 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 OAS1P00973 400 aaKnown RBP16.61■□□□□ 0.25
RPAIN-206ENST00000539417 TPM2P07951 284 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 USP17L7P0C7H9 530 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 SRFP11831 508 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 WEE1P30291 646 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 TRIM67Q6ZTA4 783 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 FAM81BQ96LP2 452 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 ULBP1Q9BZM6 244 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 UBXN6Q9BZV1 441 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 HESX1Q9UBX0 185 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 NUDT5Q9UKK9 219 aa16.61■□□□□ 0.25
RPAIN-206ENST00000539417 COL4A2P08572 1712 aa16.6■□□□□ 0.25
RPAIN-206ENST00000539417 HELZP42694 1942 aaKnown RBP16.6■□□□□ 0.25
RPAIN-206ENST00000539417 A0A1B0GTH6 734 aa16.6■□□□□ 0.25
RPAIN-206ENST00000539417 A0A1W2PQH9 124 aa16.6■□□□□ 0.25
RPAIN-206ENST00000539417 F8VZ95 297 aa16.6■□□□□ 0.25
RPAIN-206ENST00000539417 COCHO43405 550 aa16.6■□□□□ 0.25
RPAIN-206ENST00000539417 OLFM2O95897 454 aa16.6■□□□□ 0.25
RPAIN-206ENST00000539417 HDCP19113 662 aa16.6■□□□□ 0.25
RPAIN-206ENST00000539417 DDX6P26196 483 aaKnown RBP eCLIP16.6■□□□□ 0.25
RPAIN-206ENST00000539417 AVPR1AP37288 418 aa16.6■□□□□ 0.25
RPAIN-206ENST00000539417 GPD2P43304 727 aa16.6■□□□□ 0.25
RPAIN-206ENST00000539417 PLA2G4AP47712 749 aa16.6■□□□□ 0.25
RPAIN-206ENST00000539417 TKTL1P51854 596 aa16.6■□□□□ 0.25
RPAIN-206ENST00000539417 JAM2P57087 298 aa16.6■□□□□ 0.25
RPAIN-206ENST00000539417 FANCCQ00597 558 aa16.6■□□□□ 0.25
RPAIN-206ENST00000539417 SNX30Q5VWJ9 437 aa16.6■□□□□ 0.25
RPAIN-206ENST00000539417 MFSD6LQ8IWD5 586 aa16.6■□□□□ 0.25
RPAIN-206ENST00000539417 UBALD2Q8IYN6 164 aa16.6■□□□□ 0.25
RPAIN-206ENST00000539417 WDTC1Q8N5D0 677 aa16.6■□□□□ 0.25
RPAIN-206ENST00000539417 CLEC4CQ8WTT0 213 aa16.6■□□□□ 0.25
RPAIN-206ENST00000539417 WBP2Q969T9 261 aa16.6■□□□□ 0.25
RPAIN-206ENST00000539417 STK33Q9BYT3 514 aa16.6■□□□□ 0.25
RPAIN-206ENST00000539417 TSPY26PQ9H489 355 aa16.6■□□□□ 0.25
RPAIN-206ENST00000539417 TDP1Q9NUW8 608 aa16.6■□□□□ 0.25
RPAIN-206ENST00000539417 COMMD8Q9NX08 183 aa16.6■□□□□ 0.25
RPAIN-206ENST00000539417 EHD2Q9NZN4 543 aa16.6■□□□□ 0.25
RPAIN-206ENST00000539417 TJP2Q9UDY2 1190 aa16.6■□□□□ 0.25
RPAIN-206ENST00000539417 TRAV19A0A0A6YYK7 116 aa16.59■□□□□ 0.25
RPAIN-206ENST00000539417 KRBA1A5PL33 1030 aa16.59■□□□□ 0.25
RPAIN-206ENST00000539417 SCAMP3O14828 347 aaKnown RBP16.59■□□□□ 0.25
RPAIN-206ENST00000539417 MDM4O15151 490 aa16.59■□□□□ 0.25
RPAIN-206ENST00000539417 CKMP06732 381 aa16.59■□□□□ 0.25
RPAIN-206ENST00000539417 LCP1P13796 627 aa16.59■□□□□ 0.25
RPAIN-206ENST00000539417 PSMC3P17980 439 aa16.59■□□□□ 0.25
RPAIN-206ENST00000539417 GDI1P31150 447 aa16.59■□□□□ 0.25
RPAIN-206ENST00000539417 SIGLEC14Q08ET2 396 aa16.59■□□□□ 0.25
RPAIN-206ENST00000539417 ADIGQ0VDE8 80 aa16.59■□□□□ 0.25
RPAIN-206ENST00000539417 NR1I3Q14994 352 aa16.59■□□□□ 0.25
RPAIN-206ENST00000539417 PASD1Q8IV76 773 aa16.59■□□□□ 0.25
RPAIN-206ENST00000539417 RNF214Q8ND24 703 aa16.59■□□□□ 0.25
RPAIN-206ENST00000539417 TTC16Q8NEE8 873 aa16.59■□□□□ 0.25
RPAIN-206ENST00000539417 OVCA2Q8WZ82 227 aa16.59■□□□□ 0.25
RPAIN-206ENST00000539417 PCMTD1Q96MG8 357 aaPredicted RBP16.59■□□□□ 0.25
RPAIN-206ENST00000539417 FBXO44Q9H4M3 255 aa16.59■□□□□ 0.25
RPAIN-206ENST00000539417 SLC2A4RGQ9NR83 387 aa16.59■□□□□ 0.25
RPAIN-206ENST00000539417 SMPD4Q9NXE4 827 aa16.59■□□□□ 0.25
RPAIN-206ENST00000539417 CA14Q9ULX7 337 aa16.59■□□□□ 0.25
RPAIN-206ENST00000539417 KIF26AQ9ULI4 1882 aaPredicted RBP16.59■□□□□ 0.25
RPAIN-206ENST00000539417 TMEM221A6NGB7 291 aa16.58■□□□□ 0.24
RPAIN-206ENST00000539417 M0R296 226 aa16.58■□□□□ 0.24
RPAIN-206ENST00000539417 ARNTLO00327 626 aa16.58■□□□□ 0.24
RPAIN-206ENST00000539417 GFPT2O94808 682 aa16.58■□□□□ 0.24
RPAIN-206ENST00000539417 SETSIPP0DME0 302 aa16.58■□□□□ 0.24
RPAIN-206ENST00000539417 ZNF77Q15935 545 aa16.58■□□□□ 0.24
RPAIN-206ENST00000539417 HFE2Q6ZVN8 426 aa16.58■□□□□ 0.24
RPAIN-206ENST00000539417 CCDC186Q7Z3E2 898 aa16.58■□□□□ 0.24
RPAIN-206ENST00000539417 NOP9Q86U38 636 aaKnown RBP16.58■□□□□ 0.24
RPAIN-206ENST00000539417 PDZD8Q8NEN9 1154 aa16.58■□□□□ 0.24
RPAIN-206ENST00000539417 BPIFB1Q8TDL5 484 aa16.58■□□□□ 0.24
RPAIN-206ENST00000539417 KCTD13Q8WZ19 329 aa16.58■□□□□ 0.24
RPAIN-206ENST00000539417 DDX1Q92499 740 aaKnown RBP16.58■□□□□ 0.24
RPAIN-206ENST00000539417 ZFRQ96KR1 1074 aaKnown RBP16.58■□□□□ 0.24
RPAIN-206ENST00000539417 ANP32EQ9BTT0 268 aa16.58■□□□□ 0.24
RPAIN-206ENST00000539417 TRMT61BQ9BVS5 477 aaKnown RBP16.58■□□□□ 0.24
RPAIN-206ENST00000539417 GKN1Q9NS71 199 aa16.58■□□□□ 0.24
RPAIN-206ENST00000539417 CPQQ9Y646 472 aa16.58■□□□□ 0.24
RPAIN-206ENST00000539417 TICRRQ7Z2Z1 1910 aa16.57■□□□□ 0.24
RPAIN-206ENST00000539417 SHISA7A6NL88 538 aa16.57■□□□□ 0.24
RPAIN-206ENST00000539417 SOBPA7XYQ1 873 aa16.57■□□□□ 0.24
RPAIN-206ENST00000539417 DPYSL4O14531 572 aa16.57■□□□□ 0.24
RPAIN-206ENST00000539417 SERPINC1P01008 464 aa16.57■□□□□ 0.24
RPAIN-206ENST00000539417 PPP3CCP48454 512 aa16.57■□□□□ 0.24
RPAIN-206ENST00000539417 TNK2Q07912 1038 aa16.57■□□□□ 0.24
RPAIN-206ENST00000539417 FCHO2Q0JRZ9 810 aa16.57■□□□□ 0.24
RPAIN-206ENST00000539417 STILQ15468 1287 aa16.57■□□□□ 0.24
RPAIN-206ENST00000539417 HECTD3Q5T447 861 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms