RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 CHFRQ96EP1 664 aa16.56■□□□□ 0.24
CIT-210ENST00000539413 NT5C1BQ96P26 610 aa16.56■□□□□ 0.24
CIT-210ENST00000539413 DUSP16Q9BY84 665 aa16.56■□□□□ 0.24
CIT-210ENST00000539413 FBXO44Q9H4M3 255 aa16.56■□□□□ 0.24
CIT-210ENST00000539413 CCSER2Q9H7U1 834 aa16.56■□□□□ 0.24
CIT-210ENST00000539413 SMPD4Q9NXE4 827 aa16.56■□□□□ 0.24
CIT-210ENST00000539413 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.56■□□□□ 0.24
CIT-210ENST00000539413 PATJQ8NI35 1801 aa16.56■□□□□ 0.24
CIT-210ENST00000539413 HELZP42694 1942 aaKnown RBP16.55■□□□□ 0.24
CIT-210ENST00000539413 P4HA2O15460 535 aa16.55■□□□□ 0.24
CIT-210ENST00000539413 COCHO43405 550 aa16.55■□□□□ 0.24
CIT-210ENST00000539413 FGFR1OPO95684 399 aaKnown RBP16.55■□□□□ 0.24
CIT-210ENST00000539413 AFPP02771 609 aaKnown RBP16.55■□□□□ 0.24
CIT-210ENST00000539413 CCDC192P0DO97 292 aa16.55■□□□□ 0.24
CIT-210ENST00000539413 MBL2P11226 248 aaPredicted RBP16.55■□□□□ 0.24
CIT-210ENST00000539413 ACO1P21399 889 aaKnown RBP16.55■□□□□ 0.24
CIT-210ENST00000539413 TBXAS1P24557 533 aaPredicted RBP16.55■□□□□ 0.24
CIT-210ENST00000539413 MRE11P49959 708 aa16.55■□□□□ 0.24
CIT-210ENST00000539413 DPCR1Q3MIW9 517 aa16.55■□□□□ 0.24
CIT-210ENST00000539413 HECTD3Q5T447 861 aa16.55■□□□□ 0.24
CIT-210ENST00000539413 ARHGAP17Q68EM7 881 aa16.55■□□□□ 0.24
CIT-210ENST00000539413 KAT5Q92993 513 aa16.55■□□□□ 0.24
CIT-210ENST00000539413 IPO9Q96P70 1041 aaKnown RBP16.55■□□□□ 0.24
CIT-210ENST00000539413 CHRDQ9H2X0 955 aa16.55■□□□□ 0.24
CIT-210ENST00000539413 PNPLA8Q9NP80 782 aa16.55■□□□□ 0.24
CIT-210ENST00000539413 RBM12Q9NTZ6 932 aaKnown RBP16.55■□□□□ 0.24
CIT-210ENST00000539413 ZNF638Q14966 1978 aaKnown RBP16.55■□□□□ 0.24
CIT-210ENST00000539413 SCAMP3O14828 347 aaKnown RBP16.54■□□□□ 0.24
CIT-210ENST00000539413 CYP26A1O43174 497 aa16.54■□□□□ 0.24
CIT-210ENST00000539413 LAMTOR5O43504 91 aa16.54■□□□□ 0.24
CIT-210ENST00000539413 SP9P0CG40 484 aa16.54■□□□□ 0.24
CIT-210ENST00000539413 NBL1P41271 181 aa16.54■□□□□ 0.24
CIT-210ENST00000539413 YWHAEP62258 255 aaKnown RBP16.54■□□□□ 0.24
CIT-210ENST00000539413 CETN1Q12798 172 aa16.54■□□□□ 0.24
CIT-210ENST00000539413 MTAPQ13126 283 aa16.54■□□□□ 0.24
CIT-210ENST00000539413 EML3Q32P44 896 aa16.54■□□□□ 0.24
CIT-210ENST00000539413 CREBRFQ8IUR6 639 aa16.54■□□□□ 0.24
CIT-210ENST00000539413 ARHGEF19Q8IW93 802 aa16.54■□□□□ 0.24
CIT-210ENST00000539413 PPM1KQ8N3J5 372 aa16.54■□□□□ 0.24
CIT-210ENST00000539413 EHBP1Q8NDI1 1231 aa16.54■□□□□ 0.24
CIT-210ENST00000539413 CNOT6LQ96LI5 555 aaKnown RBP16.54■□□□□ 0.24
CIT-210ENST00000539413 GBP4Q96PP9 640 aa16.54■□□□□ 0.24
CIT-210ENST00000539413 LINC00597Q9H2U6 94 aa16.54■□□□□ 0.24
CIT-210ENST00000539413 ECT2Q9H8V3 914 aa16.54■□□□□ 0.24
CIT-210ENST00000539413 SCML2Q9UQR0 700 aa16.54■□□□□ 0.24
CIT-210ENST00000539413 CD19P15391 556 aa16.53■□□□□ 0.24
CIT-210ENST00000539413 GJA4P35212 333 aa16.53■□□□□ 0.24
CIT-210ENST00000539413 TUBP50607 506 aa16.53■□□□□ 0.24
CIT-210ENST00000539413 KIF11P52732 1056 aa16.53■□□□□ 0.24
CIT-210ENST00000539413 LRRC32Q14392 662 aa16.53■□□□□ 0.24
CIT-210ENST00000539413 GAS6Q14393 721 aa16.53■□□□□ 0.24
CIT-210ENST00000539413 RRAGAQ7L523 313 aa16.53■□□□□ 0.24
CIT-210ENST00000539413 TTC30AQ86WT1 665 aa16.53■□□□□ 0.24
CIT-210ENST00000539413 IRF2BP1Q8IU81 584 aa16.53■□□□□ 0.24
CIT-210ENST00000539413 CPA6Q8N4T0 437 aa16.53■□□□□ 0.24
CIT-210ENST00000539413 GPT2Q8TD30 523 aa16.53■□□□□ 0.24
CIT-210ENST00000539413 ATP2A3Q93084 1043 aa16.53■□□□□ 0.24
CIT-210ENST00000539413 ZFRQ96KR1 1074 aaKnown RBP16.53■□□□□ 0.24
CIT-210ENST00000539413 NMUR1Q9HB89 426 aa16.53■□□□□ 0.24
CIT-210ENST00000539413 TLR8Q9NR97 1041 aaKnown RBP16.53■□□□□ 0.24
CIT-210ENST00000539413 OSER1Q9NX31 292 aa16.53■□□□□ 0.24
CIT-210ENST00000539413 CFAP97Q9P2B7 532 aa16.53■□□□□ 0.24
CIT-210ENST00000539413 TSPAN16Q9UKR8 245 aa16.53■□□□□ 0.24
CIT-210ENST00000539413 PROB1E7EW31 1015 aa16.52■□□□□ 0.24
CIT-210ENST00000539413 TLR5O60602 858 aa16.52■□□□□ 0.24
CIT-210ENST00000539413 GOLGA7BQ2TAP0 167 aa16.52■□□□□ 0.24
CIT-210ENST00000539413 SGO2Q562F6 1265 aa16.52■□□□□ 0.24
CIT-210ENST00000539413 NAIF1Q69YI7 327 aaPredicted RBP16.52■□□□□ 0.24
CIT-210ENST00000539413 TSSK4Q6SA08 328 aa16.52■□□□□ 0.24
CIT-210ENST00000539413 TMEM270Q6UE05 265 aa16.52■□□□□ 0.24
CIT-210ENST00000539413 Q6ZS52 159 aa16.52■□□□□ 0.24
CIT-210ENST00000539413 PIGZQ86VD9 579 aa16.52■□□□□ 0.24
CIT-210ENST00000539413 ANKRD52Q8NB46 1076 aa16.52■□□□□ 0.24
CIT-210ENST00000539413 INTS2Q9H0H0 1204 aaKnown RBP16.52■□□□□ 0.24
CIT-210ENST00000539413 FBRSL1Q9HCM7 1045 aaKnown RBP16.52■□□□□ 0.24
CIT-210ENST00000539413 FBXO4Q9UKT5 387 aa16.52■□□□□ 0.24
CIT-210ENST00000539413 PCDHB4Q9Y5E5 795 aa16.52■□□□□ 0.24
CIT-210ENST00000539413 USP3Q9Y6I4 520 aa16.52■□□□□ 0.24
CIT-210ENST00000539413 MYO16Q9Y6X6 1858 aa16.51■□□□□ 0.23
CIT-210ENST00000539413 A0A1W2PQH9 124 aa16.51■□□□□ 0.23
CIT-210ENST00000539413 RNF225M0QZC1 329 aaPredicted RBP16.51■□□□□ 0.23
CIT-210ENST00000539413 TULP2O00295 520 aa16.51■□□□□ 0.23
CIT-210ENST00000539413 TBX18O95935 607 aa16.51■□□□□ 0.23
CIT-210ENST00000539413 VDRP11473 427 aa16.51■□□□□ 0.23
CIT-210ENST00000539413 CSTF1Q05048 431 aaKnown RBP16.51■□□□□ 0.23
CIT-210ENST00000539413 CCINQ13939 588 aa16.51■□□□□ 0.23
CIT-210ENST00000539413 TMEM196Q5HYL7 178 aa16.51■□□□□ 0.23
CIT-210ENST00000539413 DGKKQ5KSL6 1271 aa16.51■□□□□ 0.23
CIT-210ENST00000539413 FSTL4Q6MZW2 842 aa16.51■□□□□ 0.23
CIT-210ENST00000539413 DDX42Q86XP3 938 aaKnown RBP eCLIP16.51■□□□□ 0.23
CIT-210ENST00000539413 WBP2Q969T9 261 aa16.51■□□□□ 0.23
CIT-210ENST00000539413 IER2Q9BTL4 223 aa16.51■□□□□ 0.23
CIT-210ENST00000539413 UBXN6Q9BZV1 441 aa16.51■□□□□ 0.23
CIT-210ENST00000539413 NACA2Q9H009 215 aa16.51■□□□□ 0.23
CIT-210ENST00000539413 CYLDQ9NQC7 956 aa16.51■□□□□ 0.23
CIT-210ENST00000539413 PRMT8Q9NR22 394 aaPredicted RBP16.51■□□□□ 0.23
CIT-210ENST00000539413 R4GN57 208 aa16.51■□□□□ 0.23
CIT-210ENST00000539413 O00370 1275 aa16.5■□□□□ 0.23
CIT-210ENST00000539413 TRDMT1O14717 391 aaKnown RBP16.5■□□□□ 0.23
CIT-210ENST00000539413 NFATC1O95644 943 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms