RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 OSBPL5Q9H0X9 879 aaPredicted RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 G6PC2Q9NQR9 355 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 TDP1Q9NUW8 608 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 ZDHHC7Q9NXF8 308 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 IFT80Q9P2H3 777 aaPredicted RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 DBR1Q9UK59 544 aaKnown RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 TPCN1Q9ULQ1 816 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 ATP11BQ9Y2G3 1177 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 LAS1LQ9Y4W2 734 aaKnown RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 MROH6A6NGR9 719 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 C3orf70A6NLC5 250 aaPredicted RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 BTN3A1O00481 513 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 TRIM13O60858 407 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 CBFA2T3O75081 653 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 USP1O94782 785 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 ELFN1P0C7U0 828 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 PI3P19957 117 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 CD6P30203 668 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 FAM3BP58499 235 aaPredicted RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 CYP4F2P78329 520 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 CREMQ03060 361 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 GAGE2BQ13066 116 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 GRM4Q14833 912 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 ANKRD1Q15327 319 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 LY6KQ17RY6 165 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 ZNF750Q32MQ0 723 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 GAGE2EQ4V326 116 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 SLC10A5Q5PT55 438 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 AGBL4Q5VU57 503 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 GAGE2AQ6NT46 116 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 C4orf50Q6ZRC1 276 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 RAB11FIP2Q7L804 512 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 ELOA2Q8IYF1 753 aaPredicted RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 GALNT4Q8N4A0 578 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 PDPRQ8NCN5 879 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 KCNG4Q8TDN1 519 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 C7orf25Q9BPX7 421 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 ZSWIM1Q9BR11 485 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 TMEM168Q9H0V1 697 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 CHST8Q9H2A9 424 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 RNF146Q9NTX7 359 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 RGL1Q9NZL6 768 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 CWC15Q9P013 229 aaKnown RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 NTMQ9P121 344 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 GAGE2DQ9UEU5 116 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 VPS51Q9UID3 782 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 CD207Q9UJ71 328 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 FBXO2Q9UK22 296 aaPredicted RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 DAPP1Q9UN19 280 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 ANGEL1Q9UNK9 670 aaKnown RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 SNX13Q9Y5W8 968 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 PIPSLA2A3N6 862 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 GOLGA6L9A6NEM1 432 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 PSMD14O00487 310 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 APOL1O14791 398 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 MPPED1O15442 326 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 HOXA3O43365 443 aaPredicted RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 NOBOXO60393 691 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 KRT33AO76009 404 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 RECQL4O94761 1208 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 UNC5CO95185 931 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 MT-ND5P03915 603 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 ITGB1P05556 798 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 CSF1RP07333 972 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 TGFB3P10600 412 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 ZNF23P17027 643 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 BTF3P20290 206 aaKnown RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 ACVR2AP27037 513 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 PTGER1P34995 402 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 PIK3CGP48736 1102 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 CCT4P50991 539 aaKnown RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 CLRN1P58418 232 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 ST3GAL1Q11201 340 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 PRKG2Q13237 762 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 TDGQ13569 410 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 CUL4BQ13620 913 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 RALBP1Q15311 655 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 PLEKHS1Q5SXH7 462 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 ZNF761Q86XN6 746 aaPredicted RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 CPXCR1Q8N123 301 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 ZNF808Q8N4W9 903 aaPredicted RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 GADD45GIP1Q8TAE8 222 aaPredicted RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 SLC2A12Q8TD20 617 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 NACC2Q96BF6 587 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 MYEOVQ96EZ4 313 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 FRG2BQ96QU4 278 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 CITED2Q99967 270 aaPredicted RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 C11orf54Q9H0W9 315 aaPredicted RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 RNPEPQ9H4A4 650 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 NSUN3Q9H649 340 aaKnown RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 ALG13Q9NP73 1137 aaKnown RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 PNPLA8Q9NP80 782 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 TBC1D23Q9NUY8 699 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 PCMTD2Q9NV79 361 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 ETAA1Q9NY74 926 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 PSD3Q9NYI0 1048 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 HSFX1Q9UBD0 423 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 HDAC6Q9UBN7 1215 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 EIF2B4Q9UI10 523 aaKnown RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 TMEM184BQ9Y519 407 aaPredicted RBP1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms