RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 NFAT5O94916 1531 aa2.41□□□□□ -2.02
CBX3P4-201ENST00000538909 ABCC6O95255 1503 aa2.41□□□□□ -2.02
CBX3P4-201ENST00000538909 OVOS2A0A0J9YW53 1432 aa2.41□□□□□ -2.02
CBX3P4-201ENST00000538909 OVOS2Q6IE36 1432 aa2.41□□□□□ -2.02
CBX3P4-201ENST00000538909 KIF20BQ96Q89 1820 aa2.4□□□□□ -2.02
CBX3P4-201ENST00000538909 WNK3Q9BYP7 1800 aa2.4□□□□□ -2.02
CBX3P4-201ENST00000538909 PHLPP1O60346 1717 aa2.4□□□□□ -2.02
CBX3P4-201ENST00000538909 ROCK2O75116 1388 aaKnown RBP2.4□□□□□ -2.02
CBX3P4-201ENST00000538909 NINLQ9Y2I6 1382 aa2.4□□□□□ -2.02
CBX3P4-201ENST00000538909 LRP6O75581 1613 aa2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 GOLGA8AA7E2F4 631 aa2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 PPM1GO15355 546 aaPredicted RBP2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 BRINP1O60477 761 aa2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 VPS4BO75351 444 aa2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 SLC43A1O75387 559 aa2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 IL6RP08887 468 aaPredicted RBP2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 MTHFD2P13995 350 aa2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 SRSF2Q01130 221 aaKnown RBP2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 DALRD3Q5D0E6 543 aaKnown RBP2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 MEX3CQ5U5Q3 659 aaKnown RBP2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 KIRREL2Q6UWL6 708 aa2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 KCNK18Q7Z418 384 aa2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 TICAM2Q86XR7 235 aa2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 AOPEPQ8N6M6 819 aa2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 WFIKKN2Q8TEU8 576 aa2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 SH3TC2Q8TF17 1288 aa2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 ZNF479Q96JC4 524 aa2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 C7orf25Q9BPX7 421 aa2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 TARS2Q9BW92 718 aaKnown RBP2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 FSD1LQ9BXM9 530 aa2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 TINAGL1Q9GZM7 467 aaPredicted RBP2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 MRPS18AQ9NVS2 196 aaKnown RBP2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 CCNL1Q9UK58 526 aaPredicted RBP2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 SRCAPQ6ZRS2 3230 aa2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 NCAPD2Q15021 1401 aa2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 SMG6Q86US8 1419 aaKnown RBP2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 PLCH1Q4KWH8 1693 aa2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 CENPJQ9HC77 1338 aaPredicted RBP2.4□□□□□ -2.03
CBX3P4-201ENST00000538909 RGPD1P0DJD0 1748 aa2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 PEAK1Q9H792 1746 aa2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 NWD2Q9ULI1 1742 aa2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 BRD4O60885 1362 aaPredicted RBP2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 ZMYM2Q9UBW7 1377 aa2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 NOTCH3Q9UM47 2321 aa2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 FAM208AQ9UK61 1670 aaKnown RBP2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 A0A087WYN8 130 aa2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 UBE2Q2LH0YL09 131 aa2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 H7C1Q1 480 aa2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 LINC01565O15544 149 aa2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 CLSTN1O94985 981 aa2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 FESP07332 822 aa2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 CHRM5P08912 532 aaPredicted RBP2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 OSMP13725 252 aa2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 LPOP22079 712 aaPredicted RBP2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 ALDH5A1P51649 535 aaPredicted RBP2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 SCAND1P57086 179 aa2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 PSMC1P62191 440 aaKnown RBP2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 SP2Q02086 613 aa2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 TARDBPQ13148 414 aaKnown RBP eCLIP2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 ANO4Q32M45 955 aa2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 ZNF813Q6ZN06 617 aa2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 CUZD1Q86UP6 607 aa2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 SLC15A3Q8IY34 581 aa2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 PPM1KQ8N3J5 372 aa2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 IL17RDQ8NFM7 739 aa2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 SIGLEC11Q96RL6 698 aa2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 MRPL44Q9H9J2 332 aaKnown RBP2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 ETAA1Q9NY74 926 aa2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 PI4KBQ9UBF8 816 aa2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 MCM8Q9UJA3 840 aa2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 HS3ST3B1Q9Y662 390 aa2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 USP6P35125 1406 aa2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 SHANK3Q9BYB0 1731 aa2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 USP19O94966 1318 aa2.39□□□□□ -2.03
CBX3P4-201ENST00000538909 LTN1O94822 1766 aa2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 A0A1W2PP64 1363 aa2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 SBNO1A3KN83 1393 aa2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 MSH6P52701 1360 aa2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 EIF3AQ14152 1382 aaKnown RBP2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 ANKRD36BQ8N2N9 1353 aa2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 NPC1L1Q9UHC9 1359 aa2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 SLIT2O94813 1529 aa2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 SLC16A3O15427 465 aaKnown RBP2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 TULP3O75386 442 aa2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 NGFRP08138 427 aa2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 TNFRSF8P28908 595 aa2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 ID4P47928 161 aa2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 RENBPP51606 427 aa2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 SESN3P58005 492 aa2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 ZNF280AP59817 542 aaPredicted RBP2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 GPSM2P81274 684 aa2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 RBL2Q08999 1139 aa2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 OTUD3Q5T2D3 398 aaPredicted RBP2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 TNS3Q68CZ2 1445 aa2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 CAPRIN2Q6IMN6 1127 aaKnown RBP2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 EDC4Q6P2E9 1401 aaKnown RBP2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 BRINP3Q76B58 766 aa2.38□□□□□ -2.03
CBX3P4-201ENST00000538909 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms