RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 SEPT5Q99719 369 aaPredicted RBP3.76□□□□□ -1.81
PTPN22-211ENST00000538253 TTLL2Q9BWV7 592 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 DUSP16Q9BY84 665 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 DNAJC25Q9H1X3 360 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 SLITRK6Q9H5Y7 841 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 ZFP14Q9HCL3 533 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 UBE2TQ9NPD8 197 aaPredicted RBP3.76□□□□□ -1.81
PTPN22-211ENST00000538253 CISHQ9NSE2 258 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 MARCH5Q9NX47 278 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 ABI2Q9NYB9 513 aaPredicted RBP3.76□□□□□ -1.81
PTPN22-211ENST00000538253 UBAP1Q9NZ09 502 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 TUBGCP4Q9UGJ1 667 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 DNAJC12Q9UKB3 198 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 INTUQ9ULD6 942 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 PCDHGC3Q9UN70 934 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 HES2Q9Y543 173 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 EME2A4GXA9 379 aaPredicted RBP3.76□□□□□ -1.81
PTPN22-211ENST00000538253 IRAK2O43187 625 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 ADH1CP00326 375 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 GZMAP12544 262 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 ATP1A3P13637 1013 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 GNA15P30679 374 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 SSTR3P32745 418 aaPredicted RBP3.76□□□□□ -1.81
PTPN22-211ENST00000538253 SOX5P35711 763 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 FXR1P51114 621 aaKnown RBP eCLIP3.76□□□□□ -1.81
PTPN22-211ENST00000538253 EPHA5P54756 1037 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 FANCCQ00597 558 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 USP4Q13107 963 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 DMC1Q14565 340 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 HADHQ16836 314 aaKnown RBP3.76□□□□□ -1.81
PTPN22-211ENST00000538253 SLC39A12Q504Y0 691 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 HS1BP3Q53T59 392 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 AGAP9Q5VTM2 703 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 FAAH2Q6GMR7 532 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 SDE2Q6IQ49 451 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 PTCRAQ6ISU1 281 aaPredicted RBP3.76□□□□□ -1.81
PTPN22-211ENST00000538253 FAM171BQ6P995 826 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 LRRC31Q6UY01 552 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 ARCQ7LC44 396 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 LIMS2Q7Z4I7 341 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 FAM35AQ86V20 835 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 ZNF280BQ86YH2 543 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 TMTC1Q8IUR5 882 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 CCDC170Q8IYT3 715 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 BBS5Q8N3I7 341 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 OR8K1Q8NGG5 319 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 GABPB2Q8TAK5 448 aaPredicted RBP3.76□□□□□ -1.81
PTPN22-211ENST00000538253 MYLIPQ8WY64 445 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 ANKRD7Q92527 254 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 PSMG2Q969U7 264 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 ACDQ96AP0 544 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 CYFIP2Q96F07 1278 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 MYRFLQ96LU7 910 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 PPP1R2P1Q96PQ5 205 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 SLC2A11Q9BYW1 496 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 OSBPL6Q9BZF3 934 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 TRIM7Q9C029 511 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 TRPV5Q9NQA5 729 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 EPS15L1Q9UBC2 864 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 MTUS1Q9ULD2 1270 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 TMCC3Q9ULS5 477 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 MAPK8IP1Q9UQF2 711 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 TELO2Q9Y4R8 837 aa3.76□□□□□ -1.81
PTPN22-211ENST00000538253 CXorf51AA0A1B0GTR3 108 aa3.75□□□□□ -1.81
PTPN22-211ENST00000538253 SSU72P8A0A1W2PR75 194 aa3.75□□□□□ -1.81
PTPN22-211ENST00000538253 SYCE3A1L190 88 aa3.75□□□□□ -1.81
PTPN22-211ENST00000538253 MTMR11A4FU01 709 aa3.75□□□□□ -1.81
PTPN22-211ENST00000538253 FAM189A1O60320 539 aa3.75□□□□□ -1.81
PTPN22-211ENST00000538253 HSF2BPO75031 334 aa3.75□□□□□ -1.81
PTPN22-211ENST00000538253 MTA2O94776 668 aa3.75□□□□□ -1.81
PTPN22-211ENST00000538253 SERPING1P05155 500 aa3.75□□□□□ -1.81
PTPN22-211ENST00000538253 CNPP09543 421 aaKnown RBP3.75□□□□□ -1.81
PTPN22-211ENST00000538253 PTGS1P23219 599 aa3.75□□□□□ -1.81
PTPN22-211ENST00000538253 TKTP29401 623 aaKnown RBP3.75□□□□□ -1.81
PTPN22-211ENST00000538253 TNFSF9P41273 254 aa3.75□□□□□ -1.81
PTPN22-211ENST00000538253 HARS2P49590 506 aaKnown RBP3.75□□□□□ -1.81
PTPN22-211ENST00000538253 CLK1P49759 484 aaKnown RBP3.75□□□□□ -1.81
PTPN22-211ENST00000538253 CLCN4P51793 760 aa3.75□□□□□ -1.81
PTPN22-211ENST00000538253 CASP5P51878 434 aa3.75□□□□□ -1.81
PTPN22-211ENST00000538253 WASHC5Q12768 1159 aa3.75□□□□□ -1.81
PTPN22-211ENST00000538253 RAPGEF1Q13905 1077 aa3.75□□□□□ -1.81
PTPN22-211ENST00000538253 CBX2Q14781 532 aaPredicted RBP3.75□□□□□ -1.81
PTPN22-211ENST00000538253 KRT31Q15323 416 aa3.75□□□□□ -1.81
PTPN22-211ENST00000538253 SMAD2Q15796 467 aaKnown RBP3.75□□□□□ -1.81
PTPN22-211ENST00000538253 TDRD12Q587J7 1177 aaKnown RBP3.75□□□□□ -1.81
PTPN22-211ENST00000538253 RARS2Q5T160 578 aaKnown RBP3.75□□□□□ -1.81
PTPN22-211ENST00000538253 SPECC1LQ69YQ0 1117 aa3.75□□□□□ -1.81
PTPN22-211ENST00000538253 LILRA6Q6PI73 481 aa3.75□□□□□ -1.81
PTPN22-211ENST00000538253 C11orf57Q6ZUT1 292 aaPredicted RBP3.75□□□□□ -1.81
PTPN22-211ENST00000538253 BZW1Q7L1Q6 419 aaKnown RBP3.75□□□□□ -1.81
PTPN22-211ENST00000538253 CDR2LQ86X02 465 aaPredicted RBP3.75□□□□□ -1.81
PTPN22-211ENST00000538253 ERICH1Q86X53 443 aa3.75□□□□□ -1.81
PTPN22-211ENST00000538253 MAP7D3Q8IWC1 876 aa3.75□□□□□ -1.81
PTPN22-211ENST00000538253 SLC7A14Q8TBB6 771 aa3.75□□□□□ -1.81
PTPN22-211ENST00000538253 GPT2Q8TD30 523 aa3.75□□□□□ -1.81
PTPN22-211ENST00000538253 MAIP1Q8WWC4 291 aa3.75□□□□□ -1.81
PTPN22-211ENST00000538253 SHC3Q92529 594 aa3.75□□□□□ -1.81
PTPN22-211ENST00000538253 MYLPFQ96A32 169 aa3.75□□□□□ -1.81
PTPN22-211ENST00000538253 NACC2Q96BF6 587 aa3.75□□□□□ -1.81
PTPN22-211ENST00000538253 IGFLR1Q9H665 355 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms