RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 TTC30AQ86WT1 665 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 MAP7D3Q8IWC1 876 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 SLC2A14Q8TDB8 520 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 CCT6BQ92526 530 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 ZFP42Q96MM3 310 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 AGAP3Q96P47 875 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 PGLYRP2Q96PD5 576 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 TMEM237Q96Q45 408 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 GCOM2Q9BZD3 368 aaPredicted RBP9.08□□□□□ -0.96
UBE3B-208ENST00000538070 MARCOQ9UEW3 520 aaPredicted RBP9.08□□□□□ -0.96
UBE3B-208ENST00000538070 CNTN6Q9UQ52 1028 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 C2orf71A6NGG8 1288 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 A8MUI8 341 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 CELF2O95319 508 aaKnown RBP9.08□□□□□ -0.96
UBE3B-208ENST00000538070 SNAI1O95863 264 aaPredicted RBP9.08□□□□□ -0.96
UBE3B-208ENST00000538070 ATP2A2P16615 1042 aaKnown RBP9.08□□□□□ -0.96
UBE3B-208ENST00000538070 AMPD1P23109 780 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 GPX6P59796 221 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 SPARCL1Q14515 664 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 DGKDQ16760 1214 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 CYB5D1Q6P9G0 228 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 CES3Q6UWW8 571 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 UBR7Q8N806 425 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 ATP11CQ8NB49 1132 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 HASPINQ8TF76 798 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 ERP27Q96DN0 273 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 CNPY3Q9BT09 278 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 SLC17A7Q9P2U7 560 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 PCDHGC3Q9UN70 934 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 DNAJC25-GNG10A0A024R161 153 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 I3L4J1 428 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 IGF2BP3O00425 579 aaKnown RBP eCLIP9.08□□□□□ -0.96
UBE3B-208ENST00000538070 TREHO43280 583 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 ADCY6O43306 1168 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 TARSP26639 723 aaKnown RBP9.08□□□□□ -0.96
UBE3B-208ENST00000538070 GNL1P36915 607 aaPredicted RBP9.08□□□□□ -0.96
UBE3B-208ENST00000538070 SLC26A2P50443 739 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 GBE1Q04446 702 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 ZNF268Q14587 947 aaPredicted RBP9.08□□□□□ -0.96
UBE3B-208ENST00000538070 CCL14Q16627 93 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 KBTBD12Q3ZCT8 623 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 EMC10Q5UCC4 262 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 MFSD5Q6N075 450 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 BEST2Q8NFU1 509 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 CCHCR1Q8TD31 782 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 CKAP2Q8WWK9 683 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 BRI3BPQ8WY22 251 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 FAM111AQ96PZ2 611 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 C16orf70Q9BSU1 422 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 SNRNP25Q9BV90 132 aaKnown RBP9.08□□□□□ -0.96
UBE3B-208ENST00000538070 PHTF1Q9UMS5 762 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 DOCK1Q14185 1865 aa9.08□□□□□ -0.96
UBE3B-208ENST00000538070 KIF13BQ9NQT8 1826 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 APOL1O14791 398 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 CAPN9O14815 690 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 PAEPP09466 180 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 PROZP22891 400 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 GRIA1P42261 906 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 FAAP100Q0VG06 881 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 AP1B1Q10567 949 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 PTK7Q13308 1070 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 CCDC14Q49A88 953 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 MDH1BQ5I0G3 518 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 SPDYCQ5MJ68 293 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 PPP1R2P3Q6NXS1 205 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 BBS12Q6ZW61 710 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 TRABD2AQ86V40 505 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 PARP9Q8IXQ6 854 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 TTC13Q8NBP0 860 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 NPLOC4Q8TAT6 608 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 TCP10LQ8TDR4 215 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 SLCO2A1Q92959 643 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 RSAD1Q9HA92 442 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 ETNK1Q9HBU6 452 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 WDR35Q9P2L0 1181 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 PSMC3IPQ9P2W1 217 aaPredicted RBP9.07□□□□□ -0.96
UBE3B-208ENST00000538070 L3MBTL1Q9Y468 752 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 FSBPO95073 299 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 ITGAVP06756 1048 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 ZNF143P52747 638 aaPredicted RBP9.07□□□□□ -0.96
UBE3B-208ENST00000538070 GEMIN4P57678 1058 aaKnown RBP9.07□□□□□ -0.96
UBE3B-208ENST00000538070 SETDB1Q15047 1291 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 SNCBQ16143 134 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 PPP1R15BQ5SWA1 713 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 MROH9Q5TGP6 573 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 DENND5BQ6ZUT9 1274 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 RFX8Q6ZV50 586 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 FUKQ8N0W3 1084 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 SLC35B2Q8TB61 432 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 KCNV2Q8TDN2 545 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 TINF2Q9BSI4 451 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 ASB7Q9H672 318 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 ACTR5Q9H9F9 607 aaPredicted RBP9.07□□□□□ -0.96
UBE3B-208ENST00000538070 UBN1Q9NPG3 1134 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 SLC17A6Q9P2U8 582 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 LOXHD1Q8IVV2 1947 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 CLUHO75153 1309 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 PAPSS1O43252 624 aaPredicted RBP9.07□□□□□ -0.96
UBE3B-208ENST00000538070 UGT1A9O60656 530 aa9.07□□□□□ -0.96
UBE3B-208ENST00000538070 CPP00450 1065 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms