RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 ASB3Q9Y575 518 aa12.18□□□□□ -0.46
SNHG1-206ENST00000537925 BZW2Q9Y6E2 419 aaKnown RBP12.18□□□□□ -0.46
SNHG1-206ENST00000537925 CAPN6Q9Y6Q1 641 aa12.18□□□□□ -0.46
SNHG1-206ENST00000537925 MYO16Q9Y6X6 1858 aa12.17□□□□□ -0.46
SNHG1-206ENST00000537925 MACROD2A1Z1Q3 448 aa12.17□□□□□ -0.46
SNHG1-206ENST00000537925 CES2O00748 559 aa12.17□□□□□ -0.46
SNHG1-206ENST00000537925 SOAT2O75908 522 aa12.17□□□□□ -0.46
SNHG1-206ENST00000537925 RHOP08100 348 aa12.17□□□□□ -0.46
SNHG1-206ENST00000537925 PLEKP08567 350 aaPredicted RBP12.17□□□□□ -0.46
SNHG1-206ENST00000537925 CYP2F1P24903 491 aa12.17□□□□□ -0.46
SNHG1-206ENST00000537925 MAGEA11P43364 429 aa12.17□□□□□ -0.46
SNHG1-206ENST00000537925 NDST1P52848 882 aa12.17□□□□□ -0.46
SNHG1-206ENST00000537925 EPHB3P54753 998 aa12.17□□□□□ -0.46
SNHG1-206ENST00000537925 EPHA5P54756 1037 aa12.17□□□□□ -0.46
SNHG1-206ENST00000537925 CETN1Q12798 172 aa12.17□□□□□ -0.46
SNHG1-206ENST00000537925 MGAT5BQ3V5L5 792 aa12.17□□□□□ -0.46
SNHG1-206ENST00000537925 PABPC1LQ4VXU2 614 aaKnown RBP12.17□□□□□ -0.46
SNHG1-206ENST00000537925 MDH1BQ5I0G3 518 aa12.17□□□□□ -0.46
SNHG1-206ENST00000537925 C4orf50Q6ZRC1 276 aa12.17□□□□□ -0.46
SNHG1-206ENST00000537925 SPATA2LQ8IUW3 424 aaPredicted RBP12.17□□□□□ -0.46
SNHG1-206ENST00000537925 CRYBG2Q8N1P7 616 aa12.17□□□□□ -0.46
SNHG1-206ENST00000537925 ELMOD1Q8N336 334 aa12.17□□□□□ -0.46
SNHG1-206ENST00000537925 PCED1BQ96HM7 432 aa12.17□□□□□ -0.46
SNHG1-206ENST00000537925 TNIP3Q96KP6 325 aa12.17□□□□□ -0.46
SNHG1-206ENST00000537925 ZNF512Q96ME7 567 aaPredicted RBP12.17□□□□□ -0.46
SNHG1-206ENST00000537925 OSBPL9Q96SU4 736 aa12.17□□□□□ -0.46
SNHG1-206ENST00000537925 SEPT5Q99719 369 aaPredicted RBP12.17□□□□□ -0.46
SNHG1-206ENST00000537925 LPIN3Q9BQK8 851 aa12.17□□□□□ -0.46
SNHG1-206ENST00000537925 LRRC3Q9BY71 257 aa12.17□□□□□ -0.46
SNHG1-206ENST00000537925 GANQ9H2C0 597 aa12.17□□□□□ -0.46
SNHG1-206ENST00000537925 HMGXB4Q9UGU5 601 aa12.17□□□□□ -0.46
SNHG1-206ENST00000537925 DAAM1Q9Y4D1 1078 aa12.17□□□□□ -0.46
SNHG1-206ENST00000537925 GTPBP10A4D1E9 387 aaKnown RBP12.16□□□□□ -0.46
SNHG1-206ENST00000537925 GRID2IPA4D2P6 1211 aa12.16□□□□□ -0.46
SNHG1-206ENST00000537925 C2CD4DB7Z1M9 353 aa12.16□□□□□ -0.46
SNHG1-206ENST00000537925 PDE2AO00408 941 aaPredicted RBP12.16□□□□□ -0.46
SNHG1-206ENST00000537925 CILPO75339 1184 aa12.16□□□□□ -0.46
SNHG1-206ENST00000537925 FSHRP23945 695 aa12.16□□□□□ -0.46
SNHG1-206ENST00000537925 SLC18A3Q16572 532 aa12.16□□□□□ -0.46
SNHG1-206ENST00000537925 SLC5A9Q2M3M2 681 aa12.16□□□□□ -0.46
SNHG1-206ENST00000537925 PRSS36Q5K4E3 855 aa12.16□□□□□ -0.46
SNHG1-206ENST00000537925 VSTM1Q6UX27 236 aa12.16□□□□□ -0.46
SNHG1-206ENST00000537925 CCNI2Q6ZMN8 369 aaPredicted RBP12.16□□□□□ -0.46
SNHG1-206ENST00000537925 OTOP3Q7RTS5 596 aa12.16□□□□□ -0.46
SNHG1-206ENST00000537925 DNAJB7Q7Z6W7 309 aaPredicted RBP12.16□□□□□ -0.46
SNHG1-206ENST00000537925 TMC8Q8IU68 726 aa12.16□□□□□ -0.46
SNHG1-206ENST00000537925 ZDHHC14Q8IZN3 488 aa12.16□□□□□ -0.46
SNHG1-206ENST00000537925 TTC39CQ8N584 583 aa12.16□□□□□ -0.46
SNHG1-206ENST00000537925 LEMD2Q8NC56 503 aa12.16□□□□□ -0.46
SNHG1-206ENST00000537925 WHAMMQ8TF30 809 aa12.16□□□□□ -0.46
SNHG1-206ENST00000537925 PSMG2Q969U7 264 aa12.16□□□□□ -0.46
SNHG1-206ENST00000537925 ACSF2Q96CM8 615 aaPredicted RBP12.16□□□□□ -0.46
SNHG1-206ENST00000537925 TWNKQ96RR1 684 aa12.16□□□□□ -0.46
SNHG1-206ENST00000537925 CORO1BQ9BR76 489 aa12.16□□□□□ -0.46
SNHG1-206ENST00000537925 LSM14BQ9BX40 385 aaKnown RBP12.16□□□□□ -0.46
SNHG1-206ENST00000537925 CISHQ9NSE2 258 aa12.16□□□□□ -0.46
SNHG1-206ENST00000537925 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.16□□□□□ -0.46
SNHG1-206ENST00000537925 DUSP10Q9Y6W6 482 aa12.16□□□□□ -0.46
SNHG1-206ENST00000537925 HELZP42694 1942 aaKnown RBP12.16□□□□□ -0.46
SNHG1-206ENST00000537925 SRGAP2O75044 1071 aa12.15□□□□□ -0.46
SNHG1-206ENST00000537925 MICAL2O94851 1124 aa12.15□□□□□ -0.46
SNHG1-206ENST00000537925 CD58P19256 250 aa12.15□□□□□ -0.46
SNHG1-206ENST00000537925 SP100P23497 879 aaPredicted RBP12.15□□□□□ -0.46
SNHG1-206ENST00000537925 CCR2P41597 374 aa12.15□□□□□ -0.46
SNHG1-206ENST00000537925 PRKCIP41743 596 aa12.15□□□□□ -0.46
SNHG1-206ENST00000537925 PAFAH1B1P43034 410 aa12.15□□□□□ -0.46
SNHG1-206ENST00000537925 RPL10AP62906 217 aaKnown RBP12.15□□□□□ -0.46
SNHG1-206ENST00000537925 NNTQ13423 1086 aa12.15□□□□□ -0.46
SNHG1-206ENST00000537925 CUL2Q13617 745 aa12.15□□□□□ -0.46
SNHG1-206ENST00000537925 PAQR9Q6ZVX9 377 aa12.15□□□□□ -0.46
SNHG1-206ENST00000537925 ACOT1Q86TX2 421 aa12.15□□□□□ -0.46
SNHG1-206ENST00000537925 ITIH5Q86UX2 942 aa12.15□□□□□ -0.46
SNHG1-206ENST00000537925 HS6ST3Q8IZP7 471 aa12.15□□□□□ -0.46
SNHG1-206ENST00000537925 PLCD3Q8N3E9 789 aa12.15□□□□□ -0.46
SNHG1-206ENST00000537925 UBR7Q8N806 425 aa12.15□□□□□ -0.46
SNHG1-206ENST00000537925 TDRD5Q8NAT2 981 aaKnown RBP12.15□□□□□ -0.46
SNHG1-206ENST00000537925 SPATA4Q8NEY3 305 aa12.15□□□□□ -0.46
SNHG1-206ENST00000537925 ITFG1Q8TB96 612 aa12.15□□□□□ -0.46
SNHG1-206ENST00000537925 AENQ8WTP8 325 aaKnown RBP12.15□□□□□ -0.46
SNHG1-206ENST00000537925 NT5C1BQ96P26 610 aa12.15□□□□□ -0.46
SNHG1-206ENST00000537925 MYADMQ96S97 322 aa12.15□□□□□ -0.46
SNHG1-206ENST00000537925 NT5C1AQ9BXI3 368 aa12.15□□□□□ -0.46
SNHG1-206ENST00000537925 B3GNT5Q9BYG0 378 aa12.15□□□□□ -0.46
SNHG1-206ENST00000537925 HPCAL4Q9UM19 191 aa12.15□□□□□ -0.46
SNHG1-206ENST00000537925 TFR2Q9UP52 801 aa12.15□□□□□ -0.46
SNHG1-206ENST00000537925 ZNF197O14709 1029 aa12.14□□□□□ -0.47
SNHG1-206ENST00000537925 MOSPD3O75425 235 aa12.14□□□□□ -0.47
SNHG1-206ENST00000537925 GFPT2O94808 682 aa12.14□□□□□ -0.47
SNHG1-206ENST00000537925 MOCS3O95396 460 aa12.14□□□□□ -0.47
SNHG1-206ENST00000537925 HMGA1P17096 107 aaKnown RBP12.14□□□□□ -0.47
SNHG1-206ENST00000537925 BDNFP23560 247 aa12.14□□□□□ -0.47
SNHG1-206ENST00000537925 TBXAS1P24557 533 aaPredicted RBP12.14□□□□□ -0.47
SNHG1-206ENST00000537925 SSTR3P32745 418 aaPredicted RBP12.14□□□□□ -0.47
SNHG1-206ENST00000537925 GPR15P49685 360 aa12.14□□□□□ -0.47
SNHG1-206ENST00000537925 ORC1Q13415 861 aa12.14□□□□□ -0.47
SNHG1-206ENST00000537925 VEPH1Q14D04 833 aa12.14□□□□□ -0.47
SNHG1-206ENST00000537925 DDR2Q16832 855 aa12.14□□□□□ -0.47
SNHG1-206ENST00000537925 TDRD12Q587J7 1177 aaKnown RBP12.14□□□□□ -0.47
SNHG1-206ENST00000537925 CYP4A22Q5TCH4 519 aa12.14□□□□□ -0.47
SNHG1-206ENST00000537925 KLHDC7AQ5VTJ3 777 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms