RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	ADM5	C9JUS6	153 aa		6.23	□□□□□ -1.41
PRKDC-208	ENST00000536710	SPDEF	O95238	335 aa		6.23	□□□□□ -1.41
PRKDC-208	ENST00000536710	VNN1	O95497	513 aa		6.23	□□□□□ -1.41
PRKDC-208	ENST00000536710	AGR2	O95994	175 aa		6.23	□□□□□ -1.41
PRKDC-208	ENST00000536710	ANXA6	P08133	673 aa		6.23	□□□□□ -1.41
PRKDC-208	ENST00000536710	CD53	P19397	219 aa		6.23	□□□□□ -1.41
PRKDC-208	ENST00000536710	BMPR1A	P36894	532 aa		6.23	□□□□□ -1.41
PRKDC-208	ENST00000536710	HNRNPM	P52272	730 aa	Known RBP eCLIP	6.23	□□□□□ -1.41
PRKDC-208	ENST00000536710	SCAP	Q12770	1279 aa		6.23	□□□□□ -1.41
PRKDC-208	ENST00000536710	TP53BP2	Q13625	1128 aa		6.23	□□□□□ -1.41
PRKDC-208	ENST00000536710	RALBP1	Q15311	655 aa		6.23	□□□□□ -1.41
PRKDC-208	ENST00000536710	SF3B3	Q15393	1217 aa	Known RBP	6.23	□□□□□ -1.41
PRKDC-208	ENST00000536710	MOGAT3	Q86VF5	341 aa		6.23	□□□□□ -1.41
PRKDC-208	ENST00000536710	SLC44A2	Q8IWA5	706 aa	Predicted RBP	6.23	□□□□□ -1.41
PRKDC-208	ENST00000536710	SSH3	Q8TE77	659 aa		6.23	□□□□□ -1.41
PRKDC-208	ENST00000536710	LPIN2	Q92539	896 aa		6.23	□□□□□ -1.41
PRKDC-208	ENST00000536710	GLG1	Q92896	1179 aa		6.23	□□□□□ -1.41
PRKDC-208	ENST00000536710	ZDHHC12	Q96GR4	267 aa		6.23	□□□□□ -1.41
PRKDC-208	ENST00000536710	UBXN10	Q96LJ8	280 aa		6.23	□□□□□ -1.41
PRKDC-208	ENST00000536710	CDK5RAP1	Q96SZ6	601 aa	Known RBP	6.23	□□□□□ -1.41
PRKDC-208	ENST00000536710	PABPC3	Q9H361	631 aa	Known RBP	6.23	□□□□□ -1.41
PRKDC-208	ENST00000536710	TP63	Q9H3D4	680 aa	Predicted RBP	6.23	□□□□□ -1.41
PRKDC-208	ENST00000536710	TAF1D	Q9H5J8	278 aa	Predicted RBP	6.23	□□□□□ -1.41
PRKDC-208	ENST00000536710	SEPSECS	Q9HD40	501 aa	Known RBP	6.23	□□□□□ -1.41
PRKDC-208	ENST00000536710	CEP72	Q9P209	647 aa		6.23	□□□□□ -1.41
PRKDC-208	ENST00000536710	SRP68	Q9UHB9	627 aa	Known RBP	6.23	□□□□□ -1.41
PRKDC-208	ENST00000536710	VPS51	Q9UID3	782 aa		6.23	□□□□□ -1.41
PRKDC-208	ENST00000536710	DRG1	Q9Y295	367 aa	Known RBP	6.23	□□□□□ -1.41
PRKDC-208	ENST00000536710	RRN3P2	A6NIE6	340 aa		6.22	□□□□□ -1.41
PRKDC-208	ENST00000536710	LPXN	O60711	386 aa		6.22	□□□□□ -1.41
PRKDC-208	ENST00000536710	PYGL	P06737	847 aa		6.22	□□□□□ -1.41
PRKDC-208	ENST00000536710	RHO	P08100	348 aa		6.22	□□□□□ -1.41
PRKDC-208	ENST00000536710	NR4A1	P22736	598 aa		6.22	□□□□□ -1.41
PRKDC-208	ENST00000536710	SLC25A3	Q00325	362 aa		6.22	□□□□□ -1.41
PRKDC-208	ENST00000536710	ITIH3	Q06033	890 aa		6.22	□□□□□ -1.41
PRKDC-208	ENST00000536710	GRM4	Q14833	912 aa		6.22	□□□□□ -1.41
PRKDC-208	ENST00000536710	BTBD16	Q32M84	506 aa		6.22	□□□□□ -1.41
PRKDC-208	ENST00000536710	CYP26C1	Q6V0L0	522 aa		6.22	□□□□□ -1.41
PRKDC-208	ENST00000536710	RRAGA	Q7L523	313 aa		6.22	□□□□□ -1.41
PRKDC-208	ENST00000536710	FTSJ3	Q8IY81	847 aa	Known RBP	6.22	□□□□□ -1.41
PRKDC-208	ENST00000536710	TTC9B	Q8N6N2	239 aa		6.22	□□□□□ -1.41
PRKDC-208	ENST00000536710	SCAMP5	Q8TAC9	235 aa		6.22	□□□□□ -1.41
PRKDC-208	ENST00000536710	MYCBPAP	Q8TBZ2	947 aa		6.22	□□□□□ -1.41
PRKDC-208	ENST00000536710	AFG1L	Q8WV93	481 aa		6.22	□□□□□ -1.41
PRKDC-208	ENST00000536710	WDR60	Q8WVS4	1066 aa		6.22	□□□□□ -1.41
PRKDC-208	ENST00000536710	MYEOV	Q96EZ4	313 aa		6.22	□□□□□ -1.41
PRKDC-208	ENST00000536710	PLEKHG4B	Q96PX9	1271 aa		6.22	□□□□□ -1.41
PRKDC-208	ENST00000536710	TRAPPC9	Q96Q05	1148 aa		6.22	□□□□□ -1.41
PRKDC-208	ENST00000536710	HAPLN3	Q96S86	360 aa		6.22	□□□□□ -1.41
PRKDC-208	ENST00000536710	EIF2AK1	Q9BQI3	630 aa	Known RBP	6.22	□□□□□ -1.41
PRKDC-208	ENST00000536710	VN1R3	Q9BXE9	311 aa		6.22	□□□□□ -1.41
PRKDC-208	ENST00000536710	ANAPC4	Q9UJX5	808 aa		6.22	□□□□□ -1.41
PRKDC-208	ENST00000536710	SLC27A6	Q9Y2P4	619 aa		6.22	□□□□□ -1.41
PRKDC-208	ENST00000536710	LRRFIP2	Q9Y608	721 aa	Known RBP	6.22	□□□□□ -1.41
PRKDC-208	ENST00000536710	OR2W5	A6NFC9	320 aa		6.21	□□□□□ -1.42
PRKDC-208	ENST00000536710	PSMD9	O00233	223 aa		6.21	□□□□□ -1.42
PRKDC-208	ENST00000536710	EXOC5	O00471	708 aa		6.21	□□□□□ -1.42
PRKDC-208	ENST00000536710	ERBB2	P04626	1255 aa		6.21	□□□□□ -1.42
PRKDC-208	ENST00000536710	ITGAM	P11215	1152 aa		6.21	□□□□□ -1.42
PRKDC-208	ENST00000536710	CLCN2	P51788	898 aa		6.21	□□□□□ -1.42
PRKDC-208	ENST00000536710	JAG1	P78504	1218 aa		6.21	□□□□□ -1.42
PRKDC-208	ENST00000536710	TIAL1	Q01085	375 aa	Known RBP eCLIP	6.21	□□□□□ -1.42
PRKDC-208	ENST00000536710	CUL4B	Q13620	913 aa		6.21	□□□□□ -1.42
PRKDC-208	ENST00000536710	CSHL1	Q14406	222 aa		6.21	□□□□□ -1.42
PRKDC-208	ENST00000536710	R3HDM1	Q15032	1099 aa	Known RBP	6.21	□□□□□ -1.42
PRKDC-208	ENST00000536710	RPS6KA2	Q15349	733 aa		6.21	□□□□□ -1.42
PRKDC-208	ENST00000536710	TBCC	Q15814	346 aa		6.21	□□□□□ -1.42
PRKDC-208	ENST00000536710	SLC4A8	Q2Y0W8	1093 aa		6.21	□□□□□ -1.42
PRKDC-208	ENST00000536710	SPDYA	Q5MJ70	313 aa		6.21	□□□□□ -1.42
PRKDC-208	ENST00000536710	CAND1	Q86VP6	1230 aa	Known RBP	6.21	□□□□□ -1.42
PRKDC-208	ENST00000536710	C2CD5	Q86YS7	1000 aa		6.21	□□□□□ -1.42
PRKDC-208	ENST00000536710	XAGE5	Q8WWM1	108 aa		6.21	□□□□□ -1.42
PRKDC-208	ENST00000536710	RILPL2	Q969X0	211 aa		6.21	□□□□□ -1.42
PRKDC-208	ENST00000536710	FKBP10	Q96AY3	582 aa		6.21	□□□□□ -1.42
PRKDC-208	ENST00000536710	C3orf49	Q96BT1	292 aa		6.21	□□□□□ -1.42
PRKDC-208	ENST00000536710	R3HDM4	Q96D70	268 aa		6.21	□□□□□ -1.42
PRKDC-208	ENST00000536710	EIF3C	Q99613	913 aa	Known RBP	6.21	□□□□□ -1.42
PRKDC-208	ENST00000536710	DPCD	Q9BVM2	203 aa	Predicted RBP	6.21	□□□□□ -1.42
PRKDC-208	ENST00000536710	ELAC1	Q9H777	363 aa	Known RBP	6.21	□□□□□ -1.42
PRKDC-208	ENST00000536710	PRDM8	Q9NQV8	689 aa		6.21	□□□□□ -1.42
PRKDC-208	ENST00000536710	ANKFY1	Q9P2R3	1169 aa		6.21	□□□□□ -1.42
PRKDC-208	ENST00000536710	CCNL1	Q9UK58	526 aa	Predicted RBP	6.21	□□□□□ -1.42
PRKDC-208	ENST00000536710	RIMKLB	Q9ULI2	386 aa		6.21	□□□□□ -1.42
PRKDC-208	ENST00000536710	LOC100996750	A0A140TA64	210 aa		6.2	□□□□□ -1.42
PRKDC-208	ENST00000536710		A1L4Q6	167 aa		6.2	□□□□□ -1.42
PRKDC-208	ENST00000536710	NCAM2	O15394	837 aa		6.2	□□□□□ -1.42
PRKDC-208	ENST00000536710	SLC16A3	O15427	465 aa	Known RBP	6.2	□□□□□ -1.42
PRKDC-208	ENST00000536710	PPP6R2	O75170	966 aa		6.2	□□□□□ -1.42
PRKDC-208	ENST00000536710	FES	P07332	822 aa		6.2	□□□□□ -1.42
PRKDC-208	ENST00000536710	CHRM2	P08172	466 aa		6.2	□□□□□ -1.42
PRKDC-208	ENST00000536710	CD19	P15391	556 aa		6.2	□□□□□ -1.42
PRKDC-208	ENST00000536710	DRD1	P21728	446 aa		6.2	□□□□□ -1.42
PRKDC-208	ENST00000536710	CNTF	P26441	200 aa		6.2	□□□□□ -1.42
PRKDC-208	ENST00000536710	ZFP36	P26651	326 aa	Known RBP	6.2	□□□□□ -1.42
PRKDC-208	ENST00000536710	CST5	P28325	142 aa	Predicted RBP	6.2	□□□□□ -1.42
PRKDC-208	ENST00000536710	ADD2	P35612	726 aa		6.2	□□□□□ -1.42
PRKDC-208	ENST00000536710	LIPA	P38571	399 aa		6.2	□□□□□ -1.42
PRKDC-208	ENST00000536710	ATXN1	P54253	815 aa	Known RBP	6.2	□□□□□ -1.42
PRKDC-208	ENST00000536710	PNLIPRP1	P54315	467 aa		6.2	□□□□□ -1.42
PRKDC-208	ENST00000536710	PRKAA2	P54646	552 aa		6.2	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms