RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 COQ4Q9Y3A0 265 aa14.58□□□□□ -0.08
LIG1-203ENST00000536218 HNRNPCL1O60812 293 aaKnown RBP14.57□□□□□ -0.08
LIG1-203ENST00000536218 CIB2O75838 187 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 RPA3P35244 121 aaPredicted RBP14.57□□□□□ -0.08
LIG1-203ENST00000536218 ARL2P36404 184 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 NAMPTP43490 491 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 CD97P48960 835 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 PHEXP78562 749 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 TMEM132AQ24JP5 1023 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 CTC1Q2NKJ3 1217 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 TDRD10Q5VZ19 366 aaKnown RBP14.57□□□□□ -0.08
LIG1-203ENST00000536218 METTL7BQ6UX53 244 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 ACAD11Q709F0 780 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 TMEM174Q8WUU8 243 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 C1orf54Q8WWF1 131 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 SPATA33Q96N06 139 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 PPM1HQ9ULR3 514 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 AGTPBP1Q9UPW5 1226 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 NCANO14594 1321 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 C2orf71A6NGG8 1288 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 H0YCG3 227 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 ATP9BO43861 1147 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 SERPINB8P50452 374 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 ARFIP2P53365 341 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 SEPT7Q16181 437 aaKnown RBP14.57□□□□□ -0.08
LIG1-203ENST00000536218 MMEL1Q495T6 779 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 LLGL2Q6P1M3 1020 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 KLHDC10Q6PID8 442 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 PASD1Q8IV76 773 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 UBL4BQ8N7F7 174 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 RNF149Q8NC42 400 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 GAB3Q8WWW8 586 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 CPA5Q8WXQ8 436 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 SUN2Q9UH99 717 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 PCYOX1Q9UHG3 505 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 MTUS1Q9ULD2 1270 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 PCDHA3Q9Y5H8 950 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 C2CD2LO14523 706 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 CXCL11O14625 94 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 CSDE1O75534 798 aaKnown RBP14.57□□□□□ -0.08
LIG1-203ENST00000536218 EDNRBP24530 442 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 TNFSF9P41273 254 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 HP1BP3Q5SSJ5 553 aaPredicted RBP14.57□□□□□ -0.08
LIG1-203ENST00000536218 C1orf146Q5VVC0 180 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 RIPOR1Q6ZS17 1223 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 RHPN2Q8IUC4 686 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 RHOT2Q8IXI1 618 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 ATP11CQ8NB49 1132 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 OR5B17Q8NGF7 314 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 NLRP4Q96MN2 994 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 NUP85Q9BW27 656 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 TRABDQ9H4I3 376 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 NINJ2Q9NZG7 142 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 TMEM98Q9Y2Y6 226 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.57□□□□□ -0.08
LIG1-203ENST00000536218 HEY1Q9Y5J3 304 aa14.57□□□□□ -0.08
LIG1-203ENST00000536218 B2RBV5 119 aa14.56□□□□□ -0.08
LIG1-203ENST00000536218 H3BRJ5 948 aa14.56□□□□□ -0.08
LIG1-203ENST00000536218 CLDN3O15551 220 aa14.56□□□□□ -0.08
LIG1-203ENST00000536218 COMTP21964 271 aa14.56□□□□□ -0.08
LIG1-203ENST00000536218 KRT17Q04695 432 aa14.56□□□□□ -0.08
LIG1-203ENST00000536218 LPCAT4Q643R3 524 aa14.56□□□□□ -0.08
LIG1-203ENST00000536218 ARHGAP24Q8N264 748 aa14.56□□□□□ -0.08
LIG1-203ENST00000536218 OR6Y1Q8NGX8 325 aa14.56□□□□□ -0.08
LIG1-203ENST00000536218 NIFKQ9BYG3 293 aaKnown RBP14.56□□□□□ -0.08
LIG1-203ENST00000536218 DOLKQ9UPQ8 538 aa14.56□□□□□ -0.08
LIG1-203ENST00000536218 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.56□□□□□ -0.08
LIG1-203ENST00000536218 VILLO15195 856 aa14.56□□□□□ -0.08
LIG1-203ENST00000536218 SPOPO43791 374 aa14.56□□□□□ -0.08
LIG1-203ENST00000536218 DNAJC6O75061 913 aa14.56□□□□□ -0.08
LIG1-203ENST00000536218 TXNP10599 105 aaKnown RBP14.56□□□□□ -0.08
LIG1-203ENST00000536218 ACAP1Q15027 740 aa14.56□□□□□ -0.08
LIG1-203ENST00000536218 SLC1A5Q15758 541 aa14.56□□□□□ -0.08
LIG1-203ENST00000536218 TTC7BQ86TV6 843 aa14.56□□□□□ -0.08
LIG1-203ENST00000536218 LRRC6Q86X45 466 aa14.56□□□□□ -0.08
LIG1-203ENST00000536218 VTI1AQ96AJ9 217 aa14.56□□□□□ -0.08
LIG1-203ENST00000536218 PPP1R14BQ96C90 147 aa14.56□□□□□ -0.08
LIG1-203ENST00000536218 TSPAN18Q96SJ8 248 aa14.56□□□□□ -0.08
LIG1-203ENST00000536218 THTPAQ9BU02 230 aa14.56□□□□□ -0.08
LIG1-203ENST00000536218 GRIP2Q9C0E4 1043 aa14.56□□□□□ -0.08
LIG1-203ENST00000536218 USP29Q9HBJ7 922 aa14.56□□□□□ -0.08
LIG1-203ENST00000536218 IGKV6D-21A0A0A0MT36 114 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 SOCS7O14512 581 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 GSTM4Q03013 218 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 DLG1Q12959 904 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 PDK4Q16654 411 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 TSHZ1Q6ZSZ6 1077 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 ZNF75CPQ92670 426 aaPredicted RBP14.55□□□□□ -0.08
LIG1-203ENST00000536218 PTCD3Q96EY7 689 aaKnown RBP14.55□□□□□ -0.08
LIG1-203ENST00000536218 OSBPP22059 807 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 CRABP2P29373 138 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 ITGA8P53708 1063 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 PSMD6Q15008 389 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 TMEM270Q6UE05 265 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 ZNF564Q8TBZ8 553 aaPredicted RBP14.55□□□□□ -0.08
LIG1-203ENST00000536218 SLC10A4Q96EP9 437 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 GPR20Q99678 358 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 TUT1Q9H6E5 874 aaKnown RBP14.55□□□□□ -0.08
LIG1-203ENST00000536218 EFR3BQ9Y2G0 817 aa14.55□□□□□ -0.08
LIG1-203ENST00000536218 PCDHB4Q9Y5E5 795 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms