RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 CENPUQ71F23 418 aa18.72■□□□□ 0.59
RAB40C-203ENST00000535977 RHPN2Q8IUC4 686 aa18.72■□□□□ 0.59
RAB40C-203ENST00000535977 TFAP2BQ92481 460 aa18.72■□□□□ 0.59
RAB40C-203ENST00000535977 C9orf72Q96LT7 481 aa18.72■□□□□ 0.59
RAB40C-203ENST00000535977 MIPEPQ99797 713 aa18.72■□□□□ 0.59
RAB40C-203ENST00000535977 FAM118BQ9BPY3 351 aa18.72■□□□□ 0.59
RAB40C-203ENST00000535977 BCO2Q9BYV7 579 aa18.72■□□□□ 0.59
RAB40C-203ENST00000535977 TLE6Q9H808 572 aa18.72■□□□□ 0.59
RAB40C-203ENST00000535977 SAYSD1Q9NPB0 183 aa18.72■□□□□ 0.59
RAB40C-203ENST00000535977 GMEB1Q9Y692 573 aa18.72■□□□□ 0.59
RAB40C-203ENST00000535977 ALOX15BO15296 676 aa18.72■□□□□ 0.59
RAB40C-203ENST00000535977 TBX10O75333 385 aa18.72■□□□□ 0.59
RAB40C-203ENST00000535977 PTPN4P29074 926 aa18.72■□□□□ 0.59
RAB40C-203ENST00000535977 IREB2P48200 963 aaKnown RBP18.72■□□□□ 0.59
RAB40C-203ENST00000535977 TNFAIP2Q03169 654 aa18.72■□□□□ 0.59
RAB40C-203ENST00000535977 CCDC142Q17RM4 750 aa18.72■□□□□ 0.59
RAB40C-203ENST00000535977 TMEM132AQ24JP5 1023 aa18.72■□□□□ 0.59
RAB40C-203ENST00000535977 WDR72Q3MJ13 1102 aa18.72■□□□□ 0.59
RAB40C-203ENST00000535977 DTX3LQ8TDB6 740 aa18.72■□□□□ 0.59
RAB40C-203ENST00000535977 PSMA2P25787 234 aa18.71■□□□□ 0.59
RAB40C-203ENST00000535977 ATICP31939 592 aa18.71■□□□□ 0.59
RAB40C-203ENST00000535977 AP1B1Q10567 949 aa18.71■□□□□ 0.59
RAB40C-203ENST00000535977 LIN52Q52LA3 116 aa18.71■□□□□ 0.59
RAB40C-203ENST00000535977 ACSBG2Q5FVE4 666 aa18.71■□□□□ 0.59
RAB40C-203ENST00000535977 LRRC71Q8N4P6 559 aa18.71■□□□□ 0.59
RAB40C-203ENST00000535977 SLC35B2Q8TB61 432 aa18.71■□□□□ 0.59
RAB40C-203ENST00000535977 HIC2Q96JB3 615 aa18.71■□□□□ 0.59
RAB40C-203ENST00000535977 SPATA33Q96N06 139 aa18.71■□□□□ 0.59
RAB40C-203ENST00000535977 CYP3A43Q9HB55 503 aa18.71■□□□□ 0.59
RAB40C-203ENST00000535977 PRMT7Q9NVM4 692 aaPredicted RBP18.71■□□□□ 0.59
RAB40C-203ENST00000535977 INO80B-WBP1J3KQ70 363 aa18.71■□□□□ 0.59
RAB40C-203ENST00000535977 DCTN3O75935 186 aa18.71■□□□□ 0.59
RAB40C-203ENST00000535977 YBX3P16989 372 aaKnown RBP eCLIP18.71■□□□□ 0.59
RAB40C-203ENST00000535977 NEK3P51956 506 aa18.71■□□□□ 0.59
RAB40C-203ENST00000535977 IL9RQ01113 521 aa18.71■□□□□ 0.59
RAB40C-203ENST00000535977 HSDL1Q3SXM5 330 aa18.71■□□□□ 0.59
RAB40C-203ENST00000535977 EEPD1Q7L9B9 569 aa18.71■□□□□ 0.59
RAB40C-203ENST00000535977 CYP4X1Q8N118 509 aa18.71■□□□□ 0.59
RAB40C-203ENST00000535977 PPFIBP2Q8ND30 876 aa18.71■□□□□ 0.59
RAB40C-203ENST00000535977 CFAP61Q8NHU2 1237 aa18.71■□□□□ 0.59
RAB40C-203ENST00000535977 MAML1Q92585 1016 aa18.71■□□□□ 0.59
RAB40C-203ENST00000535977 TUBGCP5Q96RT8 1024 aa18.71■□□□□ 0.59
RAB40C-203ENST00000535977 INO80BQ9C086 356 aaPredicted RBP18.71■□□□□ 0.59
RAB40C-203ENST00000535977 ASCC2Q9H1I8 757 aaPredicted RBP18.71■□□□□ 0.59
RAB40C-203ENST00000535977 KLHL11Q9NVR0 708 aa18.71■□□□□ 0.59
RAB40C-203ENST00000535977 AGTPBP1Q9UPW5 1226 aa18.71■□□□□ 0.59
RAB40C-203ENST00000535977 STARD13Q9Y3M8 1113 aa18.71■□□□□ 0.59
RAB40C-203ENST00000535977 EXOC1LA0A1B0GW35 172 aa18.7■□□□□ 0.58
RAB40C-203ENST00000535977 MAP3K7O43318 606 aa18.7■□□□□ 0.58
RAB40C-203ENST00000535977 P4HA1P13674 534 aa18.7■□□□□ 0.58
RAB40C-203ENST00000535977 TCF4P15884 667 aa18.7■□□□□ 0.58
RAB40C-203ENST00000535977 PLCB3Q01970 1234 aa18.7■□□□□ 0.58
RAB40C-203ENST00000535977 MOGSQ13724 837 aa18.7■□□□□ 0.58
RAB40C-203ENST00000535977 GPR162Q16538 588 aa18.7■□□□□ 0.58
RAB40C-203ENST00000535977 GSTA3Q16772 222 aa18.7■□□□□ 0.58
RAB40C-203ENST00000535977 FAM187BQ17R55 369 aa18.7■□□□□ 0.58
RAB40C-203ENST00000535977 RNASEH2BQ5TBB1 312 aaKnown RBP18.7■□□□□ 0.58
RAB40C-203ENST00000535977 SPOCK2Q92563 424 aa18.7■□□□□ 0.58
RAB40C-203ENST00000535977 PWWP2AQ96N64 755 aa18.7■□□□□ 0.58
RAB40C-203ENST00000535977 ZNF184Q99676 751 aaPredicted RBP18.7■□□□□ 0.58
RAB40C-203ENST00000535977 KRT82Q9NSB4 513 aa18.7■□□□□ 0.58
RAB40C-203ENST00000535977 FETUBQ9UGM5 382 aa18.7■□□□□ 0.58
RAB40C-203ENST00000535977 SLC24A2Q9UI40 661 aa18.7■□□□□ 0.58
RAB40C-203ENST00000535977 RASA4BC9J798 803 aa18.7■□□□□ 0.58
RAB40C-203ENST00000535977 RASA4O43374 803 aa18.7■□□□□ 0.58
RAB40C-203ENST00000535977 ARIH2O95376 493 aa18.7■□□□□ 0.58
RAB40C-203ENST00000535977 CD19P15391 556 aa18.7■□□□□ 0.58
RAB40C-203ENST00000535977 DNAJC3Q13217 504 aa18.7■□□□□ 0.58
RAB40C-203ENST00000535977 KCTD2Q14681 263 aa18.7■□□□□ 0.58
RAB40C-203ENST00000535977 TAZQ16635 292 aa18.7■□□□□ 0.58
RAB40C-203ENST00000535977 TAF1BQ53T94 588 aaPredicted RBP18.7■□□□□ 0.58
RAB40C-203ENST00000535977 SCARA3Q6AZY7 606 aa18.7■□□□□ 0.58
RAB40C-203ENST00000535977 CYP4F22Q6NT55 531 aa18.7■□□□□ 0.58
RAB40C-203ENST00000535977 DENND1BQ6P3S1 775 aa18.7■□□□□ 0.58
RAB40C-203ENST00000535977 ERO1BQ86YB8 467 aa18.7■□□□□ 0.58
RAB40C-203ENST00000535977 SRRM1Q8IYB3 904 aaKnown RBP18.7■□□□□ 0.58
RAB40C-203ENST00000535977 NR1H4Q96RI1 486 aaPredicted RBP18.7■□□□□ 0.58
RAB40C-203ENST00000535977 YIPF2Q9BWQ6 316 aa18.7■□□□□ 0.58
RAB40C-203ENST00000535977 CADM1Q9BY67 442 aaKnown RBP18.7■□□□□ 0.58
RAB40C-203ENST00000535977 PHTF1Q9UMS5 762 aa18.7■□□□□ 0.58
RAB40C-203ENST00000535977 DNAJC25-GNG10A0A024R161 153 aa18.69■□□□□ 0.58
RAB40C-203ENST00000535977 FAM47DPA6NHR8 397 aa18.69■□□□□ 0.58
RAB40C-203ENST00000535977 LRRC37A2A6NM11 1700 aa18.69■□□□□ 0.58
RAB40C-203ENST00000535977 SGK1O00141 431 aa18.69■□□□□ 0.58
RAB40C-203ENST00000535977 CNMDO75829 334 aa18.69■□□□□ 0.58
RAB40C-203ENST00000535977 EFCAB12Q6NXP0 572 aa18.69■□□□□ 0.58
RAB40C-203ENST00000535977 CCDC62Q6P9F0 684 aa18.69■□□□□ 0.58
RAB40C-203ENST00000535977 BBS12Q6ZW61 710 aa18.69■□□□□ 0.58
RAB40C-203ENST00000535977 TTC39CQ8N584 583 aa18.69■□□□□ 0.58
RAB40C-203ENST00000535977 DCPSQ96C86 337 aaKnown RBP18.69■□□□□ 0.58
RAB40C-203ENST00000535977 MIS12Q9H081 205 aa18.69■□□□□ 0.58
RAB40C-203ENST00000535977 VRTNQ9H8Y1 702 aa18.69■□□□□ 0.58
RAB40C-203ENST00000535977 NXF1Q9UBU9 619 aaKnown RBP18.69■□□□□ 0.58
RAB40C-203ENST00000535977 LNPEPQ9UIQ6 1025 aa18.69■□□□□ 0.58
RAB40C-203ENST00000535977 SMG5Q9UPR3 1016 aaKnown RBP18.69■□□□□ 0.58
RAB40C-203ENST00000535977 C3orf70A6NLC5 250 aaPredicted RBP18.69■□□□□ 0.58
RAB40C-203ENST00000535977 PSMG1O95456 288 aa18.69■□□□□ 0.58
RAB40C-203ENST00000535977 MCF2P10911 925 aa18.69■□□□□ 0.58
RAB40C-203ENST00000535977 RFC1P35251 1148 aaPredicted RBP18.69■□□□□ 0.58
RAB40C-203ENST00000535977 PHKA2P46019 1235 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms