RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 PTPRDP23468 1912 aa13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 ATXN2Q99700 1313 aaKnown RBP13.79□□□□□ -0.2
TNFRSF1A-207ENST00000535958 ABCA7Q8IZY2 2146 aa13.78□□□□□ -0.2
TNFRSF1A-207ENST00000535958 E2F8A0AVK6 867 aa13.78□□□□□ -0.2
TNFRSF1A-207ENST00000535958 OLFM2O95897 454 aa13.78□□□□□ -0.2
TNFRSF1A-207ENST00000535958 TRIM21P19474 475 aaKnown RBP13.78□□□□□ -0.2
TNFRSF1A-207ENST00000535958 SPINK2P20155 84 aa13.78□□□□□ -0.2
TNFRSF1A-207ENST00000535958 ZXDBP98169 803 aa13.78□□□□□ -0.2
TNFRSF1A-207ENST00000535958 RPL6Q02878 288 aaKnown RBP13.78□□□□□ -0.2
TNFRSF1A-207ENST00000535958 ANO4Q32M45 955 aa13.78□□□□□ -0.2
TNFRSF1A-207ENST00000535958 SPDYCQ5MJ68 293 aa13.78□□□□□ -0.2
TNFRSF1A-207ENST00000535958 FAM26FQ5R3K3 315 aa13.78□□□□□ -0.2
TNFRSF1A-207ENST00000535958 LY6G5CQ5SRR4 150 aa13.78□□□□□ -0.2
TNFRSF1A-207ENST00000535958 HECTD3Q5T447 861 aa13.78□□□□□ -0.2
TNFRSF1A-207ENST00000535958 SDE2Q6IQ49 451 aa13.78□□□□□ -0.2
TNFRSF1A-207ENST00000535958 KIAA1211LQ6NV74 962 aa13.78□□□□□ -0.2
TNFRSF1A-207ENST00000535958 FAM173BQ6P4H8 233 aa13.78□□□□□ -0.2
TNFRSF1A-207ENST00000535958 RABEPKQ7Z6M1 372 aa13.78□□□□□ -0.2
TNFRSF1A-207ENST00000535958 C12orf40Q86WS4 652 aa13.78□□□□□ -0.2
TNFRSF1A-207ENST00000535958 ZNF513Q8N8E2 541 aaPredicted RBP13.78□□□□□ -0.2
TNFRSF1A-207ENST00000535958 XXYLT1Q8NBI6 393 aa13.78□□□□□ -0.2
TNFRSF1A-207ENST00000535958 B3GALNT2Q8NCR0 500 aa13.78□□□□□ -0.2
TNFRSF1A-207ENST00000535958 OLIG1Q8TAK6 271 aa13.78□□□□□ -0.2
TNFRSF1A-207ENST00000535958 SYAP1Q96A49 352 aaPredicted RBP13.78□□□□□ -0.2
TNFRSF1A-207ENST00000535958 GTPBP2Q9BX10 602 aaKnown RBP13.78□□□□□ -0.2
TNFRSF1A-207ENST00000535958 ZNF518BQ9C0D4 1074 aa13.78□□□□□ -0.2
TNFRSF1A-207ENST00000535958 CUEDC2Q9H467 287 aa13.78□□□□□ -0.2
TNFRSF1A-207ENST00000535958 DEC1Q9P2X7 70 aa13.78□□□□□ -0.2
TNFRSF1A-207ENST00000535958 UBE4BO95155 1302 aa13.78□□□□□ -0.2
TNFRSF1A-207ENST00000535958 CDX4O14627 284 aaPredicted RBP13.77□□□□□ -0.21
TNFRSF1A-207ENST00000535958 FAM163BP0C2L3 166 aa13.77□□□□□ -0.21
TNFRSF1A-207ENST00000535958 IRF1P10914 325 aa13.77□□□□□ -0.21
TNFRSF1A-207ENST00000535958 HOXB2P14652 356 aa13.77□□□□□ -0.21
TNFRSF1A-207ENST00000535958 ENGP17813 658 aa13.77□□□□□ -0.21
TNFRSF1A-207ENST00000535958 ATICP31939 592 aa13.77□□□□□ -0.21
TNFRSF1A-207ENST00000535958 HOXD12P35452 270 aa13.77□□□□□ -0.21
TNFRSF1A-207ENST00000535958 GFPT1Q06210 699 aaPredicted RBP13.77□□□□□ -0.21
TNFRSF1A-207ENST00000535958 GOLGA8FQ08AF8 430 aa13.77□□□□□ -0.21
TNFRSF1A-207ENST00000535958 GOLGA8DPQ0D2H9 430 aa13.77□□□□□ -0.21
TNFRSF1A-207ENST00000535958 BIRC3Q13489 604 aa13.77□□□□□ -0.21
TNFRSF1A-207ENST00000535958 PSMD6Q15008 389 aa13.77□□□□□ -0.21
TNFRSF1A-207ENST00000535958 SLC39A14Q15043 492 aa13.77□□□□□ -0.21
TNFRSF1A-207ENST00000535958 GAB4Q2WGN9 574 aa13.77□□□□□ -0.21
TNFRSF1A-207ENST00000535958 C10orf76Q5T2E6 689 aa13.77□□□□□ -0.21
TNFRSF1A-207ENST00000535958 RHBDF2Q6PJF5 856 aa13.77□□□□□ -0.21
TNFRSF1A-207ENST00000535958 SLC36A4Q6YBV0 504 aa13.77□□□□□ -0.21
TNFRSF1A-207ENST00000535958 NAT16Q8N8M0 369 aa13.77□□□□□ -0.21
TNFRSF1A-207ENST00000535958 CEP76Q8TAP6 659 aa13.77□□□□□ -0.21
TNFRSF1A-207ENST00000535958 HPS3Q969F9 1004 aa13.77□□□□□ -0.21
TNFRSF1A-207ENST00000535958 TNIP3Q96KP6 325 aa13.77□□□□□ -0.21
TNFRSF1A-207ENST00000535958 USP28Q96RU2 1077 aa13.77□□□□□ -0.21
TNFRSF1A-207ENST00000535958 SCNM1Q9BWG6 230 aa13.77□□□□□ -0.21
TNFRSF1A-207ENST00000535958 DPEP3Q9H4B8 488 aa13.77□□□□□ -0.21
TNFRSF1A-207ENST00000535958 ZSCAN16Q9H4T2 348 aaPredicted RBP13.77□□□□□ -0.21
TNFRSF1A-207ENST00000535958 DMAP1Q9NPF5 467 aaPredicted RBP13.77□□□□□ -0.21
TNFRSF1A-207ENST00000535958 ZDHHC4Q9NPG8 344 aa13.77□□□□□ -0.21
TNFRSF1A-207ENST00000535958 AGPAT3Q9NRZ7 376 aa13.77□□□□□ -0.21
TNFRSF1A-207ENST00000535958 CFAP47Q6ZTR5 3102 aa13.77□□□□□ -0.21
TNFRSF1A-207ENST00000535958 A0A087X0B3 334 aa13.76□□□□□ -0.21
TNFRSF1A-207ENST00000535958 CLDN5O00501 218 aa13.76□□□□□ -0.21
TNFRSF1A-207ENST00000535958 CLIC2O15247 247 aa13.76□□□□□ -0.21
TNFRSF1A-207ENST00000535958 COCHO43405 550 aa13.76□□□□□ -0.21
TNFRSF1A-207ENST00000535958 SYT1P21579 422 aa13.76□□□□□ -0.21
TNFRSF1A-207ENST00000535958 PTGER3P43115 390 aa13.76□□□□□ -0.21
TNFRSF1A-207ENST00000535958 SLC5A3P53794 718 aa13.76□□□□□ -0.21
TNFRSF1A-207ENST00000535958 SNRPFP62306 86 aaKnown RBP13.76□□□□□ -0.21
TNFRSF1A-207ENST00000535958 CYP24A1Q07973 514 aa13.76□□□□□ -0.21
TNFRSF1A-207ENST00000535958 CUL4AQ13619 759 aa13.76□□□□□ -0.21
TNFRSF1A-207ENST00000535958 ZNF699Q32M78 642 aa13.76□□□□□ -0.21
TNFRSF1A-207ENST00000535958 EMC10Q5UCC4 262 aa13.76□□□□□ -0.21
TNFRSF1A-207ENST00000535958 SLC23A3Q6PIS1 610 aa13.76□□□□□ -0.21
TNFRSF1A-207ENST00000535958 FAM35AQ86V20 835 aa13.76□□□□□ -0.21
TNFRSF1A-207ENST00000535958 NELFCDQ8IXH7 590 aa13.76□□□□□ -0.21
TNFRSF1A-207ENST00000535958 GLIS3Q8NEA6 775 aa13.76□□□□□ -0.21
TNFRSF1A-207ENST00000535958 KCNV2Q8TDN2 545 aa13.76□□□□□ -0.21
TNFRSF1A-207ENST00000535958 ZCCHC14Q8WYQ9 949 aaKnown RBP13.76□□□□□ -0.21
TNFRSF1A-207ENST00000535958 DHX58Q96C10 678 aa13.76□□□□□ -0.21
TNFRSF1A-207ENST00000535958 SMARCD1Q96GM5 515 aa13.76□□□□□ -0.21
TNFRSF1A-207ENST00000535958 TRIM9Q9C026 710 aa13.76□□□□□ -0.21
TNFRSF1A-207ENST00000535958 LSM7Q9UK45 103 aaKnown RBP13.76□□□□□ -0.21
TNFRSF1A-207ENST00000535958 MORC2Q9Y6X9 1032 aaPredicted RBP13.76□□□□□ -0.21
TNFRSF1A-207ENST00000535958 LAMA1P25391 3075 aa13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 ANTXRLA6NF34 631 aa13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 EXOC3O60645 756 aa13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 OPHN1O60890 802 aa13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 STAU1O95793 577 aaKnown RBP13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 CST3P01034 146 aaPredicted RBP13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 P4HA1P13674 534 aa13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 HNRNPLP14866 589 aaKnown RBP eCLIP13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 ITPKAP23677 461 aa13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 KIR2DL1P43626 348 aaPredicted RBP13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 TUBP50607 506 aa13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 CACNA2D1P54289 1103 aa13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 MYL6P60660 151 aa13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 SIM1P81133 766 aaPredicted RBP13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 DUOXA1Q1HG43 343 aa13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 MAP7D1Q3KQU3 841 aa13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 ZNF667Q5HYK9 610 aa13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 GRAMD4Q6IC98 578 aa13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 SCARA5Q6ZMJ2 495 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms