RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 APPL2Q8NEU8 664 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 RAPGEF5Q92565 580 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 DPF3Q92784 378 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 MIEF2Q96C03 454 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 SCLT1Q96NL6 688 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 LPIN3Q9BQK8 851 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 PAAF1Q9BRP4 392 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 RSAD1Q9HA92 442 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 HMX1Q9NP08 348 aaPredicted RBP8.39□□□□□ -1.07
COL21A1-212ENST00000535941 HOMER3Q9NSC5 361 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 CDH9Q9ULB4 789 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 NEU3Q9UQ49 428 aa8.39□□□□□ -1.07
COL21A1-212ENST00000535941 DAB1O75553 588 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 ITGAVP06756 1048 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 GNL1P36915 607 aaPredicted RBP8.38□□□□□ -1.07
COL21A1-212ENST00000535941 DR1Q01658 176 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 SEMA3BQ13214 749 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 TUSC3Q13454 348 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 TFDP3Q5H9I0 405 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 ALS2CLQ60I27 953 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 BBS12Q6ZW61 710 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 MAATS1Q7Z4T9 603 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 ACOT1Q86TX2 421 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 CABS1Q96KC9 395 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 CNPY3Q9BT09 278 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 ADAM7Q9H2U9 754 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 EPB41L5Q9HCM4 733 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 CHST7Q9NS84 486 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 SF3B1O75533 1304 aaKnown RBP eCLIP8.38□□□□□ -1.07
COL21A1-212ENST00000535941 BEST1O76090 585 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 KIAA0754O94854 1291 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 PAX7P23759 505 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 KDELR1P24390 212 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 FLT3P36888 993 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 ACADSBP45954 432 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 RPL21P46778 160 aaKnown RBP8.38□□□□□ -1.07
COL21A1-212ENST00000535941 LHX1P48742 406 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 HDAC4P56524 1084 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 PSMC1P62191 440 aaKnown RBP8.38□□□□□ -1.07
COL21A1-212ENST00000535941 SCAPQ12770 1279 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 PTPROQ16827 1216 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 TMEM132AQ24JP5 1023 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 RAB6CQ53S08 254 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 TWF2Q6IBS0 349 aaKnown RBP8.38□□□□□ -1.07
COL21A1-212ENST00000535941 ALLCQ8N6M5 410 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 CCDC26Q8TAB7 109 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 LPPQ93052 612 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 HEXIM2Q96MH2 286 aaKnown RBP8.38□□□□□ -1.07
COL21A1-212ENST00000535941 GAD1Q99259 594 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 ACBD6Q9BR61 282 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 TMEM109Q9BVC6 243 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 FTHL17Q9BXU8 183 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 TRIM6Q9C030 488 aaPredicted RBP8.38□□□□□ -1.07
COL21A1-212ENST00000535941 RAB6CQ9H0N0 254 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 TRPV6Q9H1D0 765 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 CENPHQ9H3R5 247 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 FAM169AQ9Y6X4 670 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 SPOPO43791 374 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 OAZ2O95190 189 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 NUDT17P0C025 328 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 RALAP11233 206 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 CCDC130P13994 396 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 PTPN1P18031 435 aaKnown RBP8.38□□□□□ -1.07
COL21A1-212ENST00000535941 GPD1P21695 349 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 MAGEA6P43360 314 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 DPYSL2Q16555 572 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 TIGD5Q53EQ6 642 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 CCDC137Q6PK04 289 aaKnown RBP8.38□□□□□ -1.07
COL21A1-212ENST00000535941 MFSD7Q6UXD7 560 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 MYCBPAPQ8TBZ2 947 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 APBB2Q92870 758 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 PGBD4Q96DM1 585 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 SENP8Q96LD8 212 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 TOX2Q96NM4 488 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 CASD1Q96PB1 797 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 TBCBQ99426 244 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 SMOQ99835 787 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 OSBPL8Q9BZF1 889 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 PCDHB8Q9UN66 801 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 FARP1Q9Y4F1 1045 aaPredicted RBP8.38□□□□□ -1.07
COL21A1-212ENST00000535941 CAPN7Q9Y6W3 813 aa8.38□□□□□ -1.07
COL21A1-212ENST00000535941 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.37□□□□□ -1.07
COL21A1-212ENST00000535941 FAM92AA1XBS5 289 aa8.37□□□□□ -1.07
COL21A1-212ENST00000535941 CYB561D2O14569 222 aa8.37□□□□□ -1.07
COL21A1-212ENST00000535941 TNFRSF10BO14763 440 aa8.37□□□□□ -1.07
COL21A1-212ENST00000535941 ZMYND10O75800 440 aa8.37□□□□□ -1.07
COL21A1-212ENST00000535941 SCNN1GP51170 649 aa8.37□□□□□ -1.07
COL21A1-212ENST00000535941 DPYSL3Q14195 570 aa8.37□□□□□ -1.07
COL21A1-212ENST00000535941 ATP13A4Q4VNC1 1196 aa8.37□□□□□ -1.07
COL21A1-212ENST00000535941 SLC24A5Q71RS6 500 aa8.37□□□□□ -1.07
COL21A1-212ENST00000535941 STRADAQ7RTN6 431 aa8.37□□□□□ -1.07
COL21A1-212ENST00000535941 KLHDC8BQ8IXV7 354 aa8.37□□□□□ -1.07
COL21A1-212ENST00000535941 RAET1EQ8TD07 263 aa8.37□□□□□ -1.07
COL21A1-212ENST00000535941 TNIP3Q96KP6 325 aa8.37□□□□□ -1.07
COL21A1-212ENST00000535941 NPY6RQ99463 290 aa8.37□□□□□ -1.07
COL21A1-212ENST00000535941 RAB17Q9H0T7 212 aa8.37□□□□□ -1.07
COL21A1-212ENST00000535941 RABEP2Q9H5N1 569 aa8.37□□□□□ -1.07
COL21A1-212ENST00000535941 EURLQ9NYK6 297 aa8.37□□□□□ -1.07
COL21A1-212ENST00000535941 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.37□□□□□ -1.07
COL21A1-212ENST00000535941 KRT7P08729 469 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms