RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 UBQLN1Q9UMX0 589 aaKnown RBP13.98□□□□□ -0.17
VPS33B-202ENST00000535906 PDCD11Q14690 1871 aaKnown RBP13.98□□□□□ -0.17
VPS33B-202ENST00000535906 PRPSAP2O60256 369 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 DNAJC8O75937 253 aaPredicted RBP13.98□□□□□ -0.17
VPS33B-202ENST00000535906 FGFR1P11362 822 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 GCAP28676 217 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 AXLP30530 894 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 SLC6A3Q01959 620 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 XRCC4Q13426 336 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 IRF5Q13568 498 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 LRRC14Q15048 493 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 UBXN11Q5T124 520 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 SESTD1Q86VW0 696 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 UNC93AQ86WB7 457 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 ZBED8Q8IZ13 594 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 FAM71DQ8N9W8 422 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 MGARPQ8TDB4 240 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 USP6NLQ92738 828 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 NGRNQ9NPE2 291 aaKnown RBP13.98□□□□□ -0.17
VPS33B-202ENST00000535906 HESX1Q9UBX0 185 aa13.98□□□□□ -0.17
VPS33B-202ENST00000535906 KPNA7A9QM74 516 aa13.97□□□□□ -0.17
VPS33B-202ENST00000535906 ALOX15BO15296 676 aa13.97□□□□□ -0.17
VPS33B-202ENST00000535906 SNX3O60493 162 aa13.97□□□□□ -0.17
VPS33B-202ENST00000535906 ATP2C2O75185 946 aa13.97□□□□□ -0.17
VPS33B-202ENST00000535906 RBP3P10745 1247 aa13.97□□□□□ -0.17
VPS33B-202ENST00000535906 CCDC130P13994 396 aa13.97□□□□□ -0.17
VPS33B-202ENST00000535906 BRAFP15056 766 aa13.97□□□□□ -0.17
VPS33B-202ENST00000535906 CPT1AP50416 773 aa13.97□□□□□ -0.17
VPS33B-202ENST00000535906 SOX4Q06945 474 aaPredicted RBP13.97□□□□□ -0.17
VPS33B-202ENST00000535906 PDIA2Q13087 525 aaKnown RBP13.97□□□□□ -0.17
VPS33B-202ENST00000535906 MPP2Q14168 576 aa13.97□□□□□ -0.17
VPS33B-202ENST00000535906 TAF1CQ15572 869 aaPredicted RBP13.97□□□□□ -0.17
VPS33B-202ENST00000535906 ZC3H12AQ5D1E8 599 aaKnown RBP13.97□□□□□ -0.17
VPS33B-202ENST00000535906 FAM182AQ5T1J6 154 aa13.97□□□□□ -0.17
VPS33B-202ENST00000535906 SCYL2Q6P3W7 929 aa13.97□□□□□ -0.17
VPS33B-202ENST00000535906 CAPN12Q6ZSI9 719 aa13.97□□□□□ -0.17
VPS33B-202ENST00000535906 FAM172AQ8WUF8 416 aa13.97□□□□□ -0.17
VPS33B-202ENST00000535906 MAK16Q9BXY0 300 aaKnown RBP13.97□□□□□ -0.17
VPS33B-202ENST00000535906 KCNK9Q9NPC2 374 aa13.97□□□□□ -0.17
VPS33B-202ENST00000535906 GPATCH2LQ9NWQ4 482 aa13.97□□□□□ -0.17
VPS33B-202ENST00000535906 ACTL7BQ9Y614 415 aa13.97□□□□□ -0.17
VPS33B-202ENST00000535906 CEP350Q5VT06 3117 aa13.97□□□□□ -0.17
VPS33B-202ENST00000535906 TCRBV7S3A2A0A539 114 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 OAS1P00973 400 aaKnown RBP13.96□□□□□ -0.17
VPS33B-202ENST00000535906 GSTA1P08263 222 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 TFE3P19532 575 aaPredicted RBP13.96□□□□□ -0.17
VPS33B-202ENST00000535906 IL4RP24394 825 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 MNAT1P51948 309 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 CENPUQ71F23 418 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 TRPM8Q7Z2W7 1104 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 PCGF5Q86SE9 256 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 ZC3H18Q86VM9 953 aaKnown RBP13.96□□□□□ -0.17
VPS33B-202ENST00000535906 PPIL6Q8IXY8 311 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 FUKQ8N0W3 1084 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 NAT8LQ8N9F0 302 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 ARRDC4Q8NCT1 418 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 CLEC4CQ8WTT0 213 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 CKAP2Q8WWK9 683 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 TTC25Q96NG3 672 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 EXOC1LA0A1B0GW35 172 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 TCP11X1B4DZS4 312 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 DPYSL4O14531 572 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 MCF2LO15068 1137 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 SETSIPP0DME0 302 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 ADORA2BP29275 332 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 SDC4P31431 198 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 GNL1P36915 607 aaPredicted RBP13.96□□□□□ -0.17
VPS33B-202ENST00000535906 ADCY1Q08828 1119 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 HIF1AQ16665 826 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 MSS51Q4VC12 460 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 XKR4Q5GH76 650 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 FNBP1LQ5T0N5 605 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 SWT1Q5T5J6 900 aaKnown RBP13.96□□□□□ -0.17
VPS33B-202ENST00000535906 ARHGAP17Q68EM7 881 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 ANKMY2Q8IV38 441 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 SRRM1Q8IYB3 904 aaKnown RBP13.96□□□□□ -0.17
VPS33B-202ENST00000535906 RIBC1Q8N443 379 aaPredicted RBP13.96□□□□□ -0.17
VPS33B-202ENST00000535906 ANKRD42Q8N9B4 389 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 RNF157Q96PX1 679 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 HAUS2Q9NVX0 235 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 SLC12A4Q9UP95 1085 aa13.96□□□□□ -0.17
VPS33B-202ENST00000535906 CD4P01730 458 aa13.95□□□□□ -0.18
VPS33B-202ENST00000535906 ZNF157P51786 506 aaPredicted RBP13.95□□□□□ -0.18
VPS33B-202ENST00000535906 MTM1Q13496 603 aa13.95□□□□□ -0.18
VPS33B-202ENST00000535906 NOMO1Q15155 1222 aa13.95□□□□□ -0.18
VPS33B-202ENST00000535906 CA9Q16790 459 aa13.95□□□□□ -0.18
VPS33B-202ENST00000535906 CYB5D1Q6P9G0 228 aa13.95□□□□□ -0.18
VPS33B-202ENST00000535906 ARHGEF18Q6ZSZ5 1173 aa13.95□□□□□ -0.18
VPS33B-202ENST00000535906 CRYBG2Q8N1P7 616 aa13.95□□□□□ -0.18
VPS33B-202ENST00000535906 SMG8Q8ND04 991 aaKnown RBP13.95□□□□□ -0.18
VPS33B-202ENST00000535906 STK32AQ8WU08 396 aa13.95□□□□□ -0.18
VPS33B-202ENST00000535906 MAML1Q92585 1016 aa13.95□□□□□ -0.18
VPS33B-202ENST00000535906 SGSM3Q96HU1 749 aa13.95□□□□□ -0.18
VPS33B-202ENST00000535906 ADAM33Q9BZ11 813 aa13.95□□□□□ -0.18
VPS33B-202ENST00000535906 AP5M1Q9H0R1 490 aa13.95□□□□□ -0.18
VPS33B-202ENST00000535906 VPS37BQ9H9H4 285 aa13.95□□□□□ -0.18
VPS33B-202ENST00000535906 MLXIPLQ9NP71 852 aa13.95□□□□□ -0.18
VPS33B-202ENST00000535906 GDAP2Q9NXN4 497 aa13.95□□□□□ -0.18
VPS33B-202ENST00000535906 IPPQ9Y573 584 aa13.95□□□□□ -0.18
VPS33B-202ENST00000535906 C17orf102A2RUQ5 167 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms