RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 ST13P5Q8NFI4 369 aaPredicted RBP12.71□□□□□ -0.37
CHD4-203ENST00000535717 OVCA2Q8WZ82 227 aa12.71□□□□□ -0.37
CHD4-203ENST00000535717 MRPS31Q92665 395 aaKnown RBP12.71□□□□□ -0.37
CHD4-203ENST00000535717 SLC46A2Q9BY10 475 aa12.71□□□□□ -0.37
CHD4-203ENST00000535717 TRIM5Q9C035 493 aa12.71□□□□□ -0.37
CHD4-203ENST00000535717 LHX5Q9H2C1 402 aa12.71□□□□□ -0.37
CHD4-203ENST00000535717 SLITRK6Q9H5Y7 841 aa12.71□□□□□ -0.37
CHD4-203ENST00000535717 TASP1Q9H6P5 420 aa12.71□□□□□ -0.37
CHD4-203ENST00000535717 LRRC4Q9HBW1 653 aa12.71□□□□□ -0.37
CHD4-203ENST00000535717 TRPM5Q9NZQ8 1165 aa12.71□□□□□ -0.37
CHD4-203ENST00000535717 GMIPQ9P107 970 aa12.71□□□□□ -0.37
CHD4-203ENST00000535717 LIMD1Q9UGP4 676 aa12.71□□□□□ -0.37
CHD4-203ENST00000535717 NCANO14594 1321 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 C2orf78A6NCI8 922 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 PIK3R2O00459 728 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 GYPCP04921 128 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 MMEP08473 750 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 USP17L7P0C7H9 530 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 ZDHHC11BP0C7U3 371 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 LCP1P13796 627 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 FERP16591 822 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 PPP3CCP48454 512 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 RPL34P49207 117 aaKnown RBP12.7□□□□□ -0.38
CHD4-203ENST00000535717 CDR2Q01850 454 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 ADIGQ0VDE8 80 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 SNX30Q5VWJ9 437 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 E4F1Q66K89 784 aaPredicted RBP12.7□□□□□ -0.38
CHD4-203ENST00000535717 SPECC1LQ69YQ0 1117 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 PM20D1Q6GTS8 502 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 PARM1Q6UWI2 310 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 CCDC186Q7Z3E2 898 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 MON1AQ86VX9 555 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 ZNF677Q86XU0 584 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 GJD3Q8N144 294 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 MAB21L3Q8N8X9 362 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 ZSCAN18Q8TBC5 510 aaPredicted RBP12.7□□□□□ -0.38
CHD4-203ENST00000535717 STK32AQ8WU08 396 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 CPLX3Q8WVH0 158 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 IQCDQ96DY2 449 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 HSFY1Q96LI6 401 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 ASB16Q96NS5 453 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 UHRF1Q96T88 793 aaPredicted RBP12.7□□□□□ -0.38
CHD4-203ENST00000535717 SLC4A5Q9BY07 1137 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 ULBP1Q9BZM6 244 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 CAPN11Q9UMQ6 739 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 ANAPC1Q9H1A4 1944 aa12.7□□□□□ -0.38
CHD4-203ENST00000535717 A0A1W2PQH9 124 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 SOBPA7XYQ1 873 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 ANHXE9PGG2 379 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 ZBED1O96006 694 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 ABL1P00519 1130 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 FCARP24071 287 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 DDX6P26196 483 aaKnown RBP eCLIP12.69□□□□□ -0.385e-6■■■□□ 15
CHD4-203ENST00000535717 ZNF75DP51815 510 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 ZBED6P86452 979 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 FMO1Q01740 532 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 PDCLQ13371 301 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 HTR4Q13639 388 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 ASIC2Q16515 512 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 SFMBT2Q5VUG0 894 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 BHLHA9Q7RTU4 235 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 SCD5Q86SK9 330 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 CMTM8Q8IZV2 173 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 SIX6OS1Q8N1H7 587 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 C1orf131Q8NDD1 294 aaKnown RBP12.69□□□□□ -0.38
CHD4-203ENST00000535717 RSAD2Q8WXG1 361 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 NDRG1Q92597 394 aaKnown RBP12.69□□□□□ -0.38
CHD4-203ENST00000535717 FGF14Q92915 247 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 SMARCD2Q92925 531 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 SLC22A12Q96S37 553 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 CYP2S1Q96SQ9 504 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 PDCL3Q9H2J4 239 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 NMUR1Q9HB89 426 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 TRPV4Q9HBA0 871 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 TRPC7Q9HCX4 862 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 TLR8Q9NR97 1041 aaKnown RBP12.69□□□□□ -0.38
CHD4-203ENST00000535717 ST7Q9NRC1 585 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 OSER1Q9NX31 292 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 AIPL1Q9NZN9 384 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 ZMYM5Q9UJ78 669 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.69□□□□□ -0.38
CHD4-203ENST00000535717 MYO16Q9Y6X6 1858 aa12.69□□□□□ -0.38
CHD4-203ENST00000535717 PRAMEF12O95522 483 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 LSM8O95777 96 aaKnown RBP12.68□□□□□ -0.38
CHD4-203ENST00000535717 OAS1P00973 400 aaKnown RBP12.68□□□□□ -0.38
CHD4-203ENST00000535717 ASGR2P07307 311 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 CCDC172P0C7W6 258 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 WEE1P30291 646 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 CASP14P31944 242 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 CDH5P33151 784 aaPredicted RBP12.68□□□□□ -0.38
CHD4-203ENST00000535717 VIPR2P41587 438 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 ACADSBP45954 432 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 GLIPR1L2Q4G1C9 344 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 TANGO2Q6ICL3 276 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 TMEM110Q86TL2 294 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 RNF135Q8IUD6 432 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 FMNL3Q8IVF7 1028 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 ARID3BQ8IVW6 561 aaPredicted RBP12.68□□□□□ -0.38
CHD4-203ENST00000535717 SCUBE3Q8IX30 993 aa12.68□□□□□ -0.38
CHD4-203ENST00000535717 SCML4Q8N228 414 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms