RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 B3GALNT2Q8NCR0 500 aa11.93□□□□□ -0.5
CLSTN3-206ENST00000535668 STKLD1Q8NE28 680 aa11.93□□□□□ -0.5
CLSTN3-206ENST00000535668 GOLGA5Q8TBA6 731 aa11.93□□□□□ -0.5
CLSTN3-206ENST00000535668 ZNF516Q92618 1163 aa11.93□□□□□ -0.5
CLSTN3-206ENST00000535668 SYAP1Q96A49 352 aaPredicted RBP11.93□□□□□ -0.5
CLSTN3-206ENST00000535668 FNBP1Q96RU3 617 aa11.93□□□□□ -0.5
CLSTN3-206ENST00000535668 MRPL45Q9BRJ2 306 aaKnown RBP11.93□□□□□ -0.5
CLSTN3-206ENST00000535668 POLR3BQ9NW08 1133 aaPredicted RBP11.93□□□□□ -0.5
CLSTN3-206ENST00000535668 MARK1Q9P0L2 795 aa11.93□□□□□ -0.5
CLSTN3-206ENST00000535668 AKAP13Q12802 2813 aa11.93□□□□□ -0.5
CLSTN3-206ENST00000535668 SPEGQ15772 3267 aa11.93□□□□□ -0.5
CLSTN3-206ENST00000535668 MYOFQ9NZM1 2061 aa11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 DCLK1O15075 740 aa11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 SPTLC2O15270 562 aa11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 STX6O43752 255 aa11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 CUTAO60888 179 aa11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 ADAM23O75077 832 aa11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 HNRNPLP14866 589 aaKnown RBP eCLIP11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 YWHAQP27348 245 aa11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 CACNA2D1P54289 1103 aa11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 PSMC1P62191 440 aaKnown RBP11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 EOGTQ5NDL2 527 aa11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 TMEM92Q6UXU6 159 aa11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 HTR3DQ70Z44 454 aa11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 HS2ST1Q7LGA3 356 aa11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 TRMT11Q7Z4G4 463 aaKnown RBP11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 PIP4P1Q86T03 277 aa11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 SYT12Q8IV01 421 aa11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 PARD3BQ8TEW8 1205 aa11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 WHAMMQ8TF30 809 aa11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 TAF4BQ92750 862 aa11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 FAXDC2Q96IV6 333 aa11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 FAM84AQ96KN4 292 aa11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 TNIP3Q96KP6 325 aa11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 EDEM2Q9BV94 578 aa11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 B3GNT5Q9BYG0 378 aa11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 SNX25Q9H3E2 840 aa11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 PNPLA8Q9NP80 782 aa11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 TMEM9BQ9NQ34 198 aa11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 CYLDQ9NQC7 956 aa11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 NFE2L3Q9Y4A8 694 aa11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 CPQQ9Y646 472 aa11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 TNRC6BQ9UPQ9 1833 aaKnown RBP11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 KNL1Q8NG31 2342 aa11.92□□□□□ -0.5
CLSTN3-206ENST00000535668 BAHCC1Q9P281 2608 aa11.91□□□□□ -0.5
CLSTN3-206ENST00000535668 ACACAQ13085 2346 aa11.91□□□□□ -0.5
CLSTN3-206ENST00000535668 C4orf47A7E2U8 309 aa11.91□□□□□ -0.5
CLSTN3-206ENST00000535668 IKBKBO14920 756 aa11.91□□□□□ -0.5
CLSTN3-206ENST00000535668 MAPK13O15264 365 aa11.91□□□□□ -0.5
CLSTN3-206ENST00000535668 RPN1P04843 607 aaKnown RBP11.91□□□□□ -0.5
CLSTN3-206ENST00000535668 APODP05090 189 aa11.91□□□□□ -0.5
CLSTN3-206ENST00000535668 PDGFRBP09619 1106 aa11.91□□□□□ -0.5
CLSTN3-206ENST00000535668 CDR1P51861 262 aa11.91□□□□□ -0.5
CLSTN3-206ENST00000535668 CYP27A1Q02318 531 aa11.91□□□□□ -0.5
CLSTN3-206ENST00000535668 CREB5Q02930 508 aa11.91□□□□□ -0.5
CLSTN3-206ENST00000535668 GAD2Q05329 585 aa11.91□□□□□ -0.5
CLSTN3-206ENST00000535668 MESP2Q0VG99 397 aa11.91□□□□□ -0.5
CLSTN3-206ENST00000535668 KNOP1Q1ED39 458 aaKnown RBP11.91□□□□□ -0.5
CLSTN3-206ENST00000535668 MDH1BQ5I0G3 518 aa11.91□□□□□ -0.5
CLSTN3-206ENST00000535668 HECTD3Q5T447 861 aa11.91□□□□□ -0.5
CLSTN3-206ENST00000535668 LMBRD2Q68DH5 695 aaPredicted RBP11.91□□□□□ -0.5
CLSTN3-206ENST00000535668 TCEAL6Q6IPX3 200 aa11.91□□□□□ -0.5
CLSTN3-206ENST00000535668 SHC4Q6S5L8 630 aa11.91□□□□□ -0.5
CLSTN3-206ENST00000535668 RABEPKQ7Z6M1 372 aa11.91□□□□□ -0.5
CLSTN3-206ENST00000535668 METTL3Q86U44 580 aaKnown RBP11.91□□□□□ -0.5
CLSTN3-206ENST00000535668 UNC93AQ86WB7 457 aa11.91□□□□□ -0.5
CLSTN3-206ENST00000535668 TCEAL3Q969E4 200 aa11.91□□□□□ -0.5
CLSTN3-206ENST00000535668 MMS19Q96T76 1030 aa11.91□□□□□ -0.5
CLSTN3-206ENST00000535668 ZNF518BQ9C0D4 1074 aa11.91□□□□□ -0.5
CLSTN3-206ENST00000535668 FAM124BQ9H5Z6 455 aaPredicted RBP11.91□□□□□ -0.5
CLSTN3-206ENST00000535668 POLMQ9NP87 494 aaPredicted RBP11.91□□□□□ -0.5
CLSTN3-206ENST00000535668 FBXO10Q9UK96 956 aa11.91□□□□□ -0.5
CLSTN3-206ENST00000535668 PILRBQ9UKJ0 227 aa11.91□□□□□ -0.5
CLSTN3-206ENST00000535668 WDFY3Q8IZQ1 3526 aa11.9□□□□□ -0.5
CLSTN3-206ENST00000535668 SGK1O00141 431 aa11.9□□□□□ -0.5
CLSTN3-206ENST00000535668 GFRA2O00451 464 aa11.9□□□□□ -0.5
CLSTN3-206ENST00000535668 COCHO43405 550 aa11.9□□□□□ -0.5
CLSTN3-206ENST00000535668 CACNG3O60359 315 aa11.9□□□□□ -0.5
CLSTN3-206ENST00000535668 C4BPAP04003 597 aaKnown RBP11.9□□□□□ -0.5
CLSTN3-206ENST00000535668 MYL1P05976 194 aa11.9□□□□□ -0.5
CLSTN3-206ENST00000535668 ADH5P11766 374 aa11.9□□□□□ -0.5
CLSTN3-206ENST00000535668 TNNI1P19237 187 aa11.9□□□□□ -0.5
CLSTN3-206ENST00000535668 ZNF132P52740 706 aa11.9□□□□□ -0.5
CLSTN3-206ENST00000535668 TNNC1P63316 161 aa11.9□□□□□ -0.5
CLSTN3-206ENST00000535668 IRX4P78413 519 aa11.9□□□□□ -0.5
CLSTN3-206ENST00000535668 SEMA3BQ13214 749 aa11.9□□□□□ -0.5
CLSTN3-206ENST00000535668 ZACNQ401N2 412 aa11.9□□□□□ -0.5
CLSTN3-206ENST00000535668 C2orf27AQ580R0 203 aa11.9□□□□□ -0.5
CLSTN3-206ENST00000535668 NUDT18Q6ZVK8 323 aa11.9□□□□□ -0.5
CLSTN3-206ENST00000535668 LPCAT2Q7L5N7 544 aa11.9□□□□□ -0.5
CLSTN3-206ENST00000535668 CYP2U1Q7Z449 544 aa11.9□□□□□ -0.5
CLSTN3-206ENST00000535668 FUKQ8N0W3 1084 aa11.9□□□□□ -0.5
CLSTN3-206ENST00000535668 OR6B3Q8NGW1 331 aa11.9□□□□□ -0.5
CLSTN3-206ENST00000535668 CEP76Q8TAP6 659 aa11.9□□□□□ -0.5
CLSTN3-206ENST00000535668 SMARCD1Q96GM5 515 aa11.9□□□□□ -0.5
CLSTN3-206ENST00000535668 GABRG3Q99928 467 aa11.9□□□□□ -0.5
CLSTN3-206ENST00000535668 BACH2Q9BYV9 841 aa11.9□□□□□ -0.5
CLSTN3-206ENST00000535668 PANK2Q9BZ23 570 aa11.9□□□□□ -0.5
CLSTN3-206ENST00000535668 FBXO44Q9H4M3 255 aa11.9□□□□□ -0.5
CLSTN3-206ENST00000535668 DMAP1Q9NPF5 467 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms