RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 TCRBV7S2A1N4TA0A589 114 aa21.3■■□□□ 1
TNFRSF1A-205ENST00000534885 OR6C75A6NL08 312 aa21.3■■□□□ 1
TNFRSF1A-205ENST00000534885 MIPP30301 263 aa21.3■■□□□ 1
TNFRSF1A-205ENST00000534885 SDC4P31431 198 aa21.3■■□□□ 1
TNFRSF1A-205ENST00000534885 SMTNL2Q2TAL5 461 aa21.3■■□□□ 1
TNFRSF1A-205ENST00000534885 HFE2Q6ZVN8 426 aa21.3■■□□□ 1
TNFRSF1A-205ENST00000534885 ARCQ7LC44 396 aa21.3■■□□□ 1
TNFRSF1A-205ENST00000534885 RNF168Q8IYW5 571 aaPredicted RBP21.3■■□□□ 1
TNFRSF1A-205ENST00000534885 ZNF558Q96NG5 402 aa21.3■■□□□ 1
TNFRSF1A-205ENST00000534885 ANKZF1Q9H8Y5 726 aa21.3■■□□□ 1
TNFRSF1A-205ENST00000534885 ZWILCHQ9H900 591 aa21.3■■□□□ 1
TNFRSF1A-205ENST00000534885 PCSK1NQ9UHG2 260 aa21.3■■□□□ 1
TNFRSF1A-205ENST00000534885 KIAA1671Q9BY89 1806 aa21.3■■□□□ 1
TNFRSF1A-205ENST00000534885 PI4K2BG5E9Z4 385 aa21.29■■□□□ 1
TNFRSF1A-205ENST00000534885 TBC1D4O60343 1298 aa21.29■■□□□ 1
TNFRSF1A-205ENST00000534885 USP17L7P0C7H9 530 aa21.29■■□□□ 1
TNFRSF1A-205ENST00000534885 GRIK1P39086 918 aa21.29■■□□□ 1
TNFRSF1A-205ENST00000534885 DAOAP59103 153 aa21.29■■□□□ 1
TNFRSF1A-205ENST00000534885 MRPS25P82663 173 aaKnown RBP21.29■■□□□ 1
TNFRSF1A-205ENST00000534885 NFE2Q16621 373 aaPredicted RBP21.29■■□□□ 1
TNFRSF1A-205ENST00000534885 KCNT1Q5JUK3 1230 aa21.29■■□□□ 1
TNFRSF1A-205ENST00000534885 ZFYVE27Q5T4F4 411 aa21.29■■□□□ 1
TNFRSF1A-205ENST00000534885 ANKS3Q6ZW76 656 aa21.29■■□□□ 1
TNFRSF1A-205ENST00000534885 ANKS1BQ7Z6G8 1248 aa21.29■■□□□ 1
TNFRSF1A-205ENST00000534885 CCDC50Q8IVM0 306 aa21.29■■□□□ 1
TNFRSF1A-205ENST00000534885 ZDHHC14Q8IZN3 488 aa21.29■■□□□ 1
TNFRSF1A-205ENST00000534885 TTC9BQ8N6N2 239 aa21.29■■□□□ 1
TNFRSF1A-205ENST00000534885 HERPUD2Q9BSE4 406 aa21.29■■□□□ 1
TNFRSF1A-205ENST00000534885 NGRNQ9NPE2 291 aaKnown RBP21.29■■□□□ 1
TNFRSF1A-205ENST00000534885 CNGB3Q9NQW8 809 aa21.29■■□□□ 1
TNFRSF1A-205ENST00000534885 HSF2BPO75031 334 aa21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 ZRANB2O95218 330 aaKnown RBP eCLIP21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 CPB1P15086 417 aa21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 TUBB4BP68371 445 aa21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 USP41Q3LFD5 358 aa21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 TMEM240Q5SV17 173 aa21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 SLC13A5Q86YT5 568 aaPredicted RBP21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 SLC39A11Q8N1S5 342 aa21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 GPR161Q8N6U8 529 aaKnown RBP21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 ATAD1Q8NBU5 361 aa21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 EXD1Q8NHP7 514 aa21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 FAM172AQ8WUF8 416 aa21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 RNF25Q96BH1 459 aaPredicted RBP21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 PEBP4Q96S96 227 aa21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 PLVAPQ9BX97 442 aa21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 PNPLA8Q9NP80 782 aa21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 USP18Q9UMW8 372 aa21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 YJEFN3A6XGL0 299 aa21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 E7ENQ6 273 aa21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 FBXO21O94952 628 aa21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 ZBED1O96006 694 aa21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 KRT1P04264 644 aa21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 YWHAZP63104 245 aaKnown RBP21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 HADHQ16836 314 aaKnown RBP21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 POLNQ7Z5Q5 900 aa21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 SCN4BQ8IWT1 228 aa21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 DEFB106AQ8N104 65 aa21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 COLGALT1Q8NBJ5 622 aa21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 SCAMP5Q8TAC9 235 aa21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 FUBP3Q96I24 572 aaKnown RBP eCLIP21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 KRT12Q99456 494 aa21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 NAP1L3Q99457 506 aaPredicted RBP21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 LRRC1Q9BTT6 524 aa21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 C11orf84Q9BUA3 381 aaPredicted RBP21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 DDX23Q9BUQ8 820 aaKnown RBP21.28■■□□□ 1
TNFRSF1A-205ENST00000534885 H7C4K7 107 aa21.27■■□□□ 1
TNFRSF1A-205ENST00000534885 GJB5O95377 273 aa21.27■■□□□ 1
TNFRSF1A-205ENST00000534885 PCK1P35558 622 aa21.27■■□□□ 1
TNFRSF1A-205ENST00000534885 PTPN9P43378 593 aa21.27■■□□□ 1
TNFRSF1A-205ENST00000534885 SMC1AQ14683 1233 aaKnown RBP21.27■■□□□ 1
TNFRSF1A-205ENST00000534885 CYP4V2Q6ZWL3 525 aaPredicted RBP21.27■■□□□ 1
TNFRSF1A-205ENST00000534885 BHLHA9Q7RTU4 235 aa21.27■■□□□ 1
TNFRSF1A-205ENST00000534885 KLHL7Q8IXQ5 586 aa21.27■■□□□ 1
TNFRSF1A-205ENST00000534885 STKLD1Q8NE28 680 aa21.27■■□□□ 1
TNFRSF1A-205ENST00000534885 RIN2Q8WYP3 895 aaPredicted RBP21.27■■□□□ 1
TNFRSF1A-205ENST00000534885 RAPGEF5Q92565 580 aa21.27■■□□□ 1
TNFRSF1A-205ENST00000534885 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.27■■□□□ 1
TNFRSF1A-205ENST00000534885 PCDHB5Q9Y5E4 795 aa21.27■■□□□ 1
TNFRSF1A-205ENST00000534885 C2CD2LO14523 706 aa21.27■□□□□ 0.99
TNFRSF1A-205ENST00000534885 DAB1O75553 588 aa21.27■□□□□ 0.99
TNFRSF1A-205ENST00000534885 LAG3P18627 525 aa21.27■□□□□ 0.99
TNFRSF1A-205ENST00000534885 MATKP42679 507 aa21.27■□□□□ 0.99
TNFRSF1A-205ENST00000534885 GPR15P49685 360 aa21.27■□□□□ 0.99
TNFRSF1A-205ENST00000534885 HDAC4P56524 1084 aa21.27■□□□□ 0.99
TNFRSF1A-205ENST00000534885 DCAF6Q58WW2 860 aa21.27■□□□□ 0.99
TNFRSF1A-205ENST00000534885 RNF19BQ6ZMZ0 732 aa21.27■□□□□ 0.99
TNFRSF1A-205ENST00000534885 TMEM169Q96HH4 297 aa21.27■□□□□ 0.99
TNFRSF1A-205ENST00000534885 DDX47Q9H0S4 455 aaKnown RBP21.27■□□□□ 0.99
TNFRSF1A-205ENST00000534885 CHST7Q9NS84 486 aa21.27■□□□□ 0.99
TNFRSF1A-205ENST00000534885 CALCOCO1Q9P1Z2 691 aa21.27■□□□□ 0.99
TNFRSF1A-205ENST00000534885 CDY1Q9Y6F8 540 aa21.27■□□□□ 0.99
TNFRSF1A-205ENST00000534885 TNFRSF10BO14763 440 aa21.26■□□□□ 0.99
TNFRSF1A-205ENST00000534885 ADAM12O43184 909 aa21.26■□□□□ 0.99
TNFRSF1A-205ENST00000534885 VNN2O95498 520 aa21.26■□□□□ 0.99
TNFRSF1A-205ENST00000534885 TRUB2O95900 331 aaKnown RBP21.26■□□□□ 0.99
TNFRSF1A-205ENST00000534885 FYNP06241 537 aa21.26■□□□□ 0.99
TNFRSF1A-205ENST00000534885 KRT7P08729 469 aa21.26■□□□□ 0.99
TNFRSF1A-205ENST00000534885 RALAP11233 206 aa21.26■□□□□ 0.99
TNFRSF1A-205ENST00000534885 RPL17P18621 184 aaKnown RBP21.26■□□□□ 0.99
TNFRSF1A-205ENST00000534885 SLC5A3P53794 718 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms