RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 ASIC1P78348 528 aa14.76□□□□□ -0.05
CCDC84-208ENST00000534656 FOXC1Q12948 553 aa14.76□□□□□ -0.05
CCDC84-208ENST00000534656 TRPC3Q13507 836 aa14.76□□□□□ -0.05
CCDC84-208ENST00000534656 STK38Q15208 465 aa14.76□□□□□ -0.05
CCDC84-208ENST00000534656 FAM26FQ5R3K3 315 aa14.76□□□□□ -0.05
CCDC84-208ENST00000534656 LY6G5CQ5SRR4 150 aa14.76□□□□□ -0.05
CCDC84-208ENST00000534656 CNNM4Q6P4Q7 775 aa14.76□□□□□ -0.05
CCDC84-208ENST00000534656 XXYLT1Q8NBI6 393 aa14.76□□□□□ -0.05
CCDC84-208ENST00000534656 LINC00301Q8NCQ3 95 aa14.76□□□□□ -0.05
CCDC84-208ENST00000534656 FBXO32Q969P5 355 aa14.76□□□□□ -0.05
CCDC84-208ENST00000534656 CCDC127Q96BQ5 260 aa14.76□□□□□ -0.05
CCDC84-208ENST00000534656 OTUB2Q96DC9 234 aa14.76□□□□□ -0.05
CCDC84-208ENST00000534656 SPACA7Q96KW9 195 aa14.76□□□□□ -0.05
CCDC84-208ENST00000534656 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.75□□□□□ -0.05
CCDC84-208ENST00000534656 C1QTNF9BB2RNN3 333 aa14.75□□□□□ -0.05
CCDC84-208ENST00000534656 TNFRSF10BO14763 440 aa14.75□□□□□ -0.05
CCDC84-208ENST00000534656 COCHO43405 550 aa14.75□□□□□ -0.05
CCDC84-208ENST00000534656 ADAM23O75077 832 aa14.75□□□□□ -0.05
CCDC84-208ENST00000534656 C1QTNF9P0C862 333 aa14.75□□□□□ -0.05
CCDC84-208ENST00000534656 GAD2Q05329 585 aa14.75□□□□□ -0.05
CCDC84-208ENST00000534656 KDSRQ06136 332 aa14.75□□□□□ -0.05
CCDC84-208ENST00000534656 LMAN2Q12907 356 aa14.75□□□□□ -0.05
CCDC84-208ENST00000534656 BYSLQ13895 437 aaKnown RBP14.75□□□□□ -0.05
CCDC84-208ENST00000534656 TRIM61Q5EBN2 209 aa14.75□□□□□ -0.05
CCDC84-208ENST00000534656 SPDYCQ5MJ68 293 aa14.75□□□□□ -0.05
CCDC84-208ENST00000534656 SNX30Q5VWJ9 437 aa14.75□□□□□ -0.05
CCDC84-208ENST00000534656 UNQ6494/PRO21346Q6UXR6 183 aa14.75□□□□□ -0.05
CCDC84-208ENST00000534656 SYT12Q8IV01 421 aa14.75□□□□□ -0.05
CCDC84-208ENST00000534656 NELFCDQ8IXH7 590 aa14.75□□□□□ -0.05
CCDC84-208ENST00000534656 TMEFF1Q8IYR6 380 aa14.75□□□□□ -0.05
CCDC84-208ENST00000534656 PHTF2Q8N3S3 785 aa14.75□□□□□ -0.05
CCDC84-208ENST00000534656 FRMD1Q8N878 549 aa14.75□□□□□ -0.05
CCDC84-208ENST00000534656 SYAP1Q96A49 352 aaPredicted RBP14.75□□□□□ -0.05
CCDC84-208ENST00000534656 INTS4Q96HW7 963 aaKnown RBP14.75□□□□□ -0.05
CCDC84-208ENST00000534656 ZFRQ96KR1 1074 aaKnown RBP14.75□□□□□ -0.05
CCDC84-208ENST00000534656 KCNK16Q96T55 309 aa14.75□□□□□ -0.05
CCDC84-208ENST00000534656 C7orf25Q9BPX7 421 aa14.75□□□□□ -0.05
CCDC84-208ENST00000534656 NUSAP1Q9BXS6 441 aaKnown RBP14.75□□□□□ -0.05
CCDC84-208ENST00000534656 GZF1Q9H116 711 aaPredicted RBP14.75□□□□□ -0.05
CCDC84-208ENST00000534656 XYLT2Q9H1B5 865 aa14.75□□□□□ -0.05
CCDC84-208ENST00000534656 BCCIPQ9P287 314 aaKnown RBP eCLIP14.75□□□□□ -0.05
CCDC84-208ENST00000534656 NXF1Q9UBU9 619 aaKnown RBP14.75□□□□□ -0.05
CCDC84-208ENST00000534656 CHORDC1Q9UHD1 332 aaPredicted RBP14.75□□□□□ -0.05
CCDC84-208ENST00000534656 MBD1Q9UIS9 605 aaPredicted RBP14.75□□□□□ -0.05
CCDC84-208ENST00000534656 CIZ1Q9ULV3 898 aaPredicted RBP14.75□□□□□ -0.05
CCDC84-208ENST00000534656 NUP205Q92621 2012 aa14.75□□□□□ -0.05
CCDC84-208ENST00000534656 THADAQ6YHU6 1953 aa14.74□□□□□ -0.05
CCDC84-208ENST00000534656 ABCA7Q8IZY2 2146 aa14.74□□□□□ -0.05
CCDC84-208ENST00000534656 ATP8B3O60423 1300 aa14.74□□□□□ -0.05
CCDC84-208ENST00000534656 UBE4BO95155 1302 aa14.74□□□□□ -0.05
CCDC84-208ENST00000534656 CFAP47Q6ZTR5 3102 aa14.74□□□□□ -0.05
CCDC84-208ENST00000534656 SPTLC2O15270 562 aa14.74□□□□□ -0.05
CCDC84-208ENST00000534656 PPP6R2O75170 966 aa14.74□□□□□ -0.05
CCDC84-208ENST00000534656 PTGER3P43115 390 aa14.74□□□□□ -0.05
CCDC84-208ENST00000534656 MAP7D1Q3KQU3 841 aa14.74□□□□□ -0.05
CCDC84-208ENST00000534656 UAP1L1Q3KQV9 507 aa14.74□□□□□ -0.05
CCDC84-208ENST00000534656 HECTD3Q5T447 861 aa14.74□□□□□ -0.05
CCDC84-208ENST00000534656 ETFBKMTQ8IXQ9 262 aa14.74□□□□□ -0.05
CCDC84-208ENST00000534656 IQUBQ8NA54 791 aa14.74□□□□□ -0.05
CCDC84-208ENST00000534656 SCAMP5Q8TAC9 235 aa14.74□□□□□ -0.05
CCDC84-208ENST00000534656 KCNV2Q8TDN2 545 aa14.74□□□□□ -0.05
CCDC84-208ENST00000534656 SCFD1Q8WVM8 642 aa14.74□□□□□ -0.05
CCDC84-208ENST00000534656 HMGB4Q8WW32 186 aa14.74□□□□□ -0.05
CCDC84-208ENST00000534656 DHX58Q96C10 678 aa14.74□□□□□ -0.05
CCDC84-208ENST00000534656 DUSP9Q99956 384 aaKnown RBP14.74□□□□□ -0.05
CCDC84-208ENST00000534656 VRTNQ9H8Y1 702 aa14.74□□□□□ -0.05
CCDC84-208ENST00000534656 ZDHHC4Q9NPG8 344 aa14.74□□□□□ -0.05
CCDC84-208ENST00000534656 TMEM74BQ9NUR3 256 aa14.74□□□□□ -0.05
CCDC84-208ENST00000534656 IL37Q9NZH6 218 aa14.74□□□□□ -0.05
CCDC84-208ENST00000534656 CGNQ9P2M7 1197 aaKnown RBP14.74□□□□□ -0.05
CCDC84-208ENST00000534656 SH3BP1Q9Y3L3 701 aa14.74□□□□□ -0.05
CCDC84-208ENST00000534656 CNOT1A5YKK6 2376 aaKnown RBP14.74□□□□□ -0.05
CCDC84-208ENST00000534656 TCRBV21S2A2A0A5A6 115 aa14.73□□□□□ -0.05
CCDC84-208ENST00000534656 TBC1D3BA6NDS4 549 aa14.73□□□□□ -0.05
CCDC84-208ENST00000534656 HOXC11O43248 304 aaPredicted RBP14.73□□□□□ -0.05
CCDC84-208ENST00000534656 STX6O43752 255 aa14.73□□□□□ -0.05
CCDC84-208ENST00000534656 PHACTR2O75167 634 aa14.73□□□□□ -0.05
CCDC84-208ENST00000534656 SPINK2P20155 84 aa14.73□□□□□ -0.05
CCDC84-208ENST00000534656 DPP6P42658 865 aa14.73□□□□□ -0.05
CCDC84-208ENST00000534656 TUBP50607 506 aa14.73□□□□□ -0.05
CCDC84-208ENST00000534656 CDH8P55286 799 aa14.73□□□□□ -0.05
CCDC84-208ENST00000534656 EHHADHQ08426 723 aa14.73□□□□□ -0.05
CCDC84-208ENST00000534656 PREPLQ4J6C6 727 aaPredicted RBP14.73□□□□□ -0.05
CCDC84-208ENST00000534656 BTBD8Q5XKL5 378 aa14.73□□□□□ -0.05
CCDC84-208ENST00000534656 SLC23A3Q6PIS1 610 aa14.73□□□□□ -0.05
CCDC84-208ENST00000534656 PAQR9Q6ZVX9 377 aa14.73□□□□□ -0.05
CCDC84-208ENST00000534656 UNC13DQ70J99 1090 aa14.73□□□□□ -0.05
CCDC84-208ENST00000534656 ARMCX6Q7L4S7 300 aa14.73□□□□□ -0.05
CCDC84-208ENST00000534656 TRMT11Q7Z4G4 463 aaKnown RBP14.73□□□□□ -0.05
CCDC84-208ENST00000534656 FAM35AQ86V20 835 aa14.73□□□□□ -0.05
CCDC84-208ENST00000534656 C12orf56Q8IXR9 622 aa14.73□□□□□ -0.05
CCDC84-208ENST00000534656 PGBD3Q8N328 593 aa14.73□□□□□ -0.05
CCDC84-208ENST00000534656 NAT16Q8N8M0 369 aa14.73□□□□□ -0.05
CCDC84-208ENST00000534656 KDF1Q8NAX2 398 aaPredicted RBP14.73□□□□□ -0.05
CCDC84-208ENST00000534656 DEFB124Q8NES8 71 aa14.73□□□□□ -0.05
CCDC84-208ENST00000534656 MED10Q9BTT4 135 aa14.73□□□□□ -0.05
CCDC84-208ENST00000534656 SMYD3Q9H7B4 428 aa14.73□□□□□ -0.05
CCDC84-208ENST00000534656 CCSER2Q9H7U1 834 aa14.73□□□□□ -0.05
CCDC84-208ENST00000534656 SPHK2Q9NRA0 654 aa14.73□□□□□ -0.05
CCDC84-208ENST00000534656 COMMD8Q9NX08 183 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms