RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 FUKQ8N0W3 1084 aa14.01□□□□□ -0.17
BEST1-208ENST00000534553 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.01□□□□□ -0.17
BEST1-208ENST00000534553 HSPH1Q92598 858 aa14.01□□□□□ -0.17
BEST1-208ENST00000534553 KHSRPQ92945 711 aaKnown RBP eCLIP14.01□□□□□ -0.17
BEST1-208ENST00000534553 PIWIL1Q96J94 861 aaKnown RBP14.01□□□□□ -0.17
BEST1-208ENST00000534553 CFAP57Q96MR6 1250 aa14.01□□□□□ -0.17
BEST1-208ENST00000534553 SYT15Q9BQS2 421 aa14.01□□□□□ -0.17
BEST1-208ENST00000534553 C11orf84Q9BUA3 381 aaPredicted RBP14.01□□□□□ -0.17
BEST1-208ENST00000534553 DDX23Q9BUQ8 820 aaKnown RBP14.01□□□□□ -0.17
BEST1-208ENST00000534553 TMEM109Q9BVC6 243 aa14.01□□□□□ -0.17
BEST1-208ENST00000534553 FTHL17Q9BXU8 183 aa14.01□□□□□ -0.17
BEST1-208ENST00000534553 CALN1Q9BXU9 219 aa14.01□□□□□ -0.17
BEST1-208ENST00000534553 PHACTR1Q9C0D0 580 aa14.01□□□□□ -0.17
BEST1-208ENST00000534553 LRRC4Q9HBW1 653 aa14.01□□□□□ -0.17
BEST1-208ENST00000534553 NGRNQ9NPE2 291 aaKnown RBP14.01□□□□□ -0.17
BEST1-208ENST00000534553 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.01□□□□□ -0.17
BEST1-208ENST00000534553 TRMT13Q9NUP7 481 aaKnown RBP14.01□□□□□ -0.17
BEST1-208ENST00000534553 RNF19AQ9NV58 838 aa14.01□□□□□ -0.17
BEST1-208ENST00000534553 SAGE1Q9NXZ1 904 aa14.01□□□□□ -0.17
BEST1-208ENST00000534553 MEIS3P2A8K0S8 358 aa14□□□□□ -0.17
BEST1-208ENST00000534553 FKTNO75072 461 aa14□□□□□ -0.17
BEST1-208ENST00000534553 INHAP05111 366 aa14□□□□□ -0.17
BEST1-208ENST00000534553 COL6A1P12109 1028 aa14□□□□□ -0.17
BEST1-208ENST00000534553 ZFXP17010 805 aaPredicted RBP14□□□□□ -0.17
BEST1-208ENST00000534553 TGM2P21980 687 aa14□□□□□ -0.17
BEST1-208ENST00000534553 MATKP42679 507 aa14□□□□□ -0.17
BEST1-208ENST00000534553 ARSEP51690 589 aa14□□□□□ -0.17
BEST1-208ENST00000534553 MORF4L2Q15014 288 aa14□□□□□ -0.17
BEST1-208ENST00000534553 MAPRE1Q15691 268 aaKnown RBP14□□□□□ -0.17
BEST1-208ENST00000534553 C15orf59Q2T9L4 293 aaPredicted RBP14□□□□□ -0.17
BEST1-208ENST00000534553 IZUMO3Q5VZ72 239 aa14□□□□□ -0.17
BEST1-208ENST00000534553 TRNP1Q6NT89 227 aa14□□□□□ -0.17
BEST1-208ENST00000534553 PIGZQ86VD9 579 aa14□□□□□ -0.17
BEST1-208ENST00000534553 ACTL9Q8TC94 416 aa14□□□□□ -0.17
BEST1-208ENST00000534553 LPPQ93052 612 aa14□□□□□ -0.17
BEST1-208ENST00000534553 STMN4Q9H169 189 aaPredicted RBP14□□□□□ -0.17
BEST1-208ENST00000534553 STARD7Q9NQZ5 370 aa14□□□□□ -0.17
BEST1-208ENST00000534553 RGS18Q9NS28 235 aa14□□□□□ -0.17
BEST1-208ENST00000534553 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14□□□□□ -0.17
BEST1-208ENST00000534553 ZKSCAN7Q9P0L1 754 aaPredicted RBP14□□□□□ -0.17
BEST1-208ENST00000534553 STAP1Q9ULZ2 295 aa14□□□□□ -0.17
BEST1-208ENST00000534553 DNALI1O14645 258 aaPredicted RBP13.99□□□□□ -0.17
BEST1-208ENST00000534553 MGEA5O60502 916 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 DAB1O75553 588 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 CKBP12277 381 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 STIP1P31948 543 aaKnown RBP13.99□□□□□ -0.17
BEST1-208ENST00000534553 SKOR1P84550 965 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 OTUD4Q01804 1114 aaKnown RBP13.99□□□□□ -0.17
BEST1-208ENST00000534553 DMTNQ08495 405 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 CDO1Q16878 200 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 HIBCHQ6NVY1 386 aaPredicted RBP13.99□□□□□ -0.17
BEST1-208ENST00000534553 CYP4V2Q6ZWL3 525 aaPredicted RBP13.99□□□□□ -0.17
BEST1-208ENST00000534553 ZNF598Q86UK7 904 aaKnown RBP13.99□□□□□ -0.17
BEST1-208ENST00000534553 ECHDC2Q86YB7 292 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 SIX6OS1Q8N1H7 587 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 ZCCHC9Q8N567 271 aaKnown RBP13.99□□□□□ -0.17
BEST1-208ENST00000534553 MYCBPAPQ8TBZ2 947 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 ARL8AQ96BM9 186 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 ACSF2Q96CM8 615 aaPredicted RBP13.99□□□□□ -0.17
BEST1-208ENST00000534553 PEBP4Q96S96 227 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 ACBD6Q9BR61 282 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 MED10Q9BTT4 135 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 ROPN1BQ9BZX4 212 aaPredicted RBP13.99□□□□□ -0.17
BEST1-208ENST00000534553 ROPN1Q9HAT0 212 aaPredicted RBP13.99□□□□□ -0.17
BEST1-208ENST00000534553 MIOSQ9NXC5 875 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 RRN3Q9NYV6 651 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 SHOC2Q9UQ13 582 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 A0A1W2PQ45 241 aaPredicted RBP13.99□□□□□ -0.17
BEST1-208ENST00000534553 A0A1W2PQY0 241 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 CFAP69A5D8W1 941 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 M0QZQ0 153 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 SGK1O00141 431 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 PIK3R2O00459 728 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 TP73O15350 636 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 RIPK2O43353 540 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 GRAP2O75791 330 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 LCP1P13796 627 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 TKTP29401 623 aaKnown RBP13.99□□□□□ -0.17
BEST1-208ENST00000534553 GRK4P32298 578 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 LMAN1P49257 510 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 CDR1P51861 262 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 AIF1P55008 147 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 MRPS5P82675 430 aaKnown RBP13.99□□□□□ -0.17
BEST1-208ENST00000534553 ATP11AP98196 1134 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 DPYSL3Q14195 570 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 DPYSL2Q16555 572 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 SLC25A52Q3SY17 297 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 KRT71Q3SY84 523 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 MDH1BQ5I0G3 518 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 ERMARDQ5T6L9 678 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 LHX8Q68G74 356 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 DCLRE1AQ6PJP8 1040 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 GLB1LQ6UWU2 654 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 KDM7AQ6ZMT4 941 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 CLEC20AQ6ZU45 233 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 SLC24A5Q71RS6 500 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 RSAD2Q8WXG1 361 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 P3H4Q92791 437 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 FAF2Q96CS3 445 aa13.99□□□□□ -0.17
BEST1-208ENST00000534553 PGM2Q96G03 612 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms