RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 FDXRP22570 491 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 AVPR1BP47901 424 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 ITGA8P53708 1063 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 TERF1P54274 439 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 LOXL3P58215 753 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 RPS16P62249 146 aaKnown RBP4.05□□□□□ -1.76
CSMD3-210ENST00000534172 HSD11B2P80365 405 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 RESTQ13127 1097 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 SLC13A2Q13183 592 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 GRM1Q13255 1194 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 DYRK1AQ13627 763 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 INSCQ1MX18 579 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 LSM12Q3MHD2 195 aaKnown RBP4.05□□□□□ -1.76
CSMD3-210ENST00000534172 MICALCLQ6ZW33 695 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 MUL1Q969V5 352 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 TRIM43Q96BQ3 446 aaPredicted RBP4.05□□□□□ -1.76
CSMD3-210ENST00000534172 PDCL3Q9H2J4 239 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 DHX36Q9H2U1 1008 aaKnown RBP4.05□□□□□ -1.76
CSMD3-210ENST00000534172 TBCCD1Q9NVR7 557 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 ETAA1Q9NY74 926 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 DACT1Q9NYF0 836 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 XPR1Q9UBH6 696 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 DKK2Q9UBU2 259 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 SLC39A10Q9ULF5 831 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 CRYL1Q9Y2S2 319 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 CFAP74Q9C0B2 1584 aa4.05□□□□□ -1.76
CSMD3-210ENST00000534172 TRGV11A0A075B6L2 103 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 A0A087WWL8 130 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 ACKR2O00590 384 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 NPC1O15118 1278 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 PLSCR1O15162 318 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 ZNF185O15231 689 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 NDUFA10O95299 355 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 MCM7P33993 719 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 VAV2P52735 878 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 ARL4CP56559 192 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 G3BP1Q13283 466 aaKnown RBP eCLIP4.04□□□□□ -1.76
CSMD3-210ENST00000534172 PREPLQ4J6C6 727 aaPredicted RBP4.04□□□□□ -1.76
CSMD3-210ENST00000534172 CRB2Q5IJ48 1285 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 KCNV1Q6PIU1 500 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 RFX8Q6ZV50 586 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 GAS2L3Q86XJ1 694 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 FAM46DQ8NEK8 389 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 SLC9A6Q92581 669 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 USP13Q92995 863 aaPredicted RBP4.04□□□□□ -1.76
CSMD3-210ENST00000534172 ERP27Q96DN0 273 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 NEU1Q99519 415 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 NRDE2Q9H7Z3 1164 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 INTS13Q9NVM9 706 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 CLIC5Q9NZA1 410 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 HSFX1Q9UBD0 423 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 POLG2Q9UHN1 485 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 FBXO2Q9UK22 296 aaPredicted RBP4.04□□□□□ -1.76
CSMD3-210ENST00000534172 NEURL4Q96JN8 1562 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 RPGRIP1LQ68CZ1 1315 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 hCG_1984214I3L0E3 225 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 TOR1BO14657 336 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 CCP110O43303 1012 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 NCR1O76036 304 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 PRSS23O95084 383 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 CYP2A13Q16696 494 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 MGAT5BQ3V5L5 792 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 TEDDM1Q5T9Z0 273 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 JMJD6Q6NYC1 403 aaPredicted RBP4.04□□□□□ -1.76
CSMD3-210ENST00000534172 C1orf122Q6ZSJ8 110 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 RHOUQ7L0Q8 258 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 CREBRFQ8IUR6 639 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 YAF2Q8IY57 180 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 DNAJC5GQ8N7S2 189 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 FANCBQ8NB91 859 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 SNX19Q92543 992 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 MAML1Q92585 1016 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 IQCDQ96DY2 449 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 ZSCAN31Q96LW9 406 aaPredicted RBP4.04□□□□□ -1.76
CSMD3-210ENST00000534172 TLR10Q9BXR5 811 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 VPS45Q9NRW7 570 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 CTTNBP2NLQ9P2B4 639 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 MAN2B2Q9Y2E5 1009 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 RABGAP1Q9Y3P9 1069 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 FGD6Q6ZV73 1430 aa4.04□□□□□ -1.76
CSMD3-210ENST00000534172 KIF14Q15058 1648 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 E9PLN8 166 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 TRIM38O00635 465 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 THAP12O43422 761 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 ORC4O43929 436 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 DNAJB5O75953 348 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 MBD4O95243 580 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 C1SP09871 688 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 PPIFP30405 207 aaKnown RBP4.03□□□□□ -1.76
CSMD3-210ENST00000534172 PHKA1P46020 1223 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 RXRGP48443 463 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 NXPH1P58417 271 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 FOXO1Q12778 655 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 TAF12Q16514 161 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 ZXDCQ2QGD7 858 aaPredicted RBP4.03□□□□□ -1.76
CSMD3-210ENST00000534172 B3GNTL1Q67FW5 361 aaPredicted RBP4.03□□□□□ -1.76
CSMD3-210ENST00000534172 RETSATQ6NUM9 610 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 PSD4Q8NDX1 1056 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 SNX22Q96L94 193 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 VKORC1Q9BQB6 163 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms