RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, human

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHMP4A-208	ENST00000534106	FSD2	A1L4K1	749 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	RRN3P2	A6NIE6	340 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	C22orf46	C9J442	243 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	KLRF2	D3W0D1	207 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	PYCARD-AS1	I3L0S3	204 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106		M0QZ92	97 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	ZBTB5	O15062	677 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	SGSM2	O43147	1006 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	FIBP	O43427	364 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	CYTH3	O43739	400 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	THBD	P07204	575 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	ZFY	P08048	801 aa	Predicted RBP	3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	PARP1	P09874	1014 aa	Known RBP	3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	PLS3	P13797	630 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	RPL17	P18621	184 aa	Known RBP	3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	ERCC5	P28715	1186 aa	Predicted RBP	3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	PPM1A	P35813	382 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	STAT5A	P42229	794 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	PXN	P49023	591 aa	Predicted RBP	3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	NOVA1	P51513	510 aa	Known RBP	3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	STAT5B	P51692	787 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	AK2	P54819	239 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	ITGA1	P56199	1179 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	GHRHR	Q02643	423 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	SCRN1	Q12765	414 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	NONO	Q15233	471 aa	Known RBP eCLIP	3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	AASDH	Q4L235	1098 aa	Predicted RBP	3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	ZBTB41	Q5SVQ8	909 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	GPATCH4	Q5T3I0	446 aa	Known RBP	3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	LARP1B	Q659C4	914 aa	Known RBP	3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	LAIR1	Q6GTX8	287 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	TPRG1	Q6ZUI0	275 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	GRASP	Q7Z6J2	395 aa	Predicted RBP	3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	CIR1	Q86X95	450 aa	Predicted RBP	3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	LRRC43	Q8N309	656 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	NME8	Q8N427	588 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	METTL13	Q8N6R0	699 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	HNRNPLL	Q8WVV9	542 aa	Known RBP	3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	ZCCHC14	Q8WYQ9	949 aa	Known RBP	3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	RABGGTA	Q92696	567 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	CLDN23	Q96B33	292 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	MTMR8	Q96EF0	704 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	SHD	Q96IW2	340 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	FAM227B	Q96M60	508 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	ZSWIM3	Q96MP5	696 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	TTC14	Q96N46	770 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	SENP7	Q9BQF6	1050 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	SCNM1	Q9BWG6	230 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	KLC2	Q9H0B6	622 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	NT5C3A	Q9H0P0	336 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	TMEM168	Q9H0V1	697 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	SMARCAD1	Q9H4L7	1026 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	SLITRK6	Q9H5Y7	841 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	ELAC1	Q9H777	363 aa	Known RBP	3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	KAT14	Q9H8E8	782 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	LMAN1L	Q9HAT1	526 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	GPRC5C	Q9NQ84	441 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	PRMT8	Q9NR22	394 aa	Predicted RBP	3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	HEBP1	Q9NRV9	189 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	C1orf112	Q9NSG2	853 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	RBM12	Q9NTZ6	932 aa	Known RBP	3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	MAD2L2	Q9UI95	211 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	CROT	Q9UKG9	612 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	KLK13	Q9UKR3	277 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	RAB23	Q9ULC3	237 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	NDRG2	Q9UN36	371 aa	Known RBP	3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	INPP5F	Q9Y2H2	1132 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	TSC22D4	Q9Y3Q8	395 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	TCAF1	Q9Y4C2	921 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	PCDHGB7	Q9Y5F8	929 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	CLUH	O75153	1309 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	NEDD4	P46934	1319 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	KDM3A	Q9Y4C1	1321 aa		3.37	□□□□□ -1.87
CHMP4A-208	ENST00000534106	ZNF462	Q96JM2	2506 aa		3.36	□□□□□ -1.87
CHMP4A-208	ENST00000534106	hCG_1642624	A0A1W2PR95	340 aa		3.36	□□□□□ -1.87
CHMP4A-208	ENST00000534106	C9orf118	A6NHY6	69 aa		3.36	□□□□□ -1.87
CHMP4A-208	ENST00000534106	C4orf47	A7E2U8	309 aa		3.36	□□□□□ -1.87
CHMP4A-208	ENST00000534106		B4E1Z4	1266 aa		3.36	□□□□□ -1.87
CHMP4A-208	ENST00000534106	DDX39A	O00148	427 aa	Known RBP	3.36	□□□□□ -1.87
CHMP4A-208	ENST00000534106	MEIS2	O14770	477 aa		3.36	□□□□□ -1.87
CHMP4A-208	ENST00000534106	CCL16	O15467	120 aa		3.36	□□□□□ -1.87
CHMP4A-208	ENST00000534106	TGM5	O43548	720 aa		3.36	□□□□□ -1.87
CHMP4A-208	ENST00000534106	OFD1	O75665	1012 aa		3.36	□□□□□ -1.87
CHMP4A-208	ENST00000534106	CYP7B1	O75881	506 aa		3.36	□□□□□ -1.87
CHMP4A-208	ENST00000534106	KCNH1	O95259	989 aa		3.36	□□□□□ -1.87
CHMP4A-208	ENST00000534106	CCNE2	O96020	404 aa		3.36	□□□□□ -1.87
CHMP4A-208	ENST00000534106	SLPI	P03973	132 aa		3.36	□□□□□ -1.87
CHMP4A-208	ENST00000534106	ZSCAN20	P17040	1043 aa	Predicted RBP	3.36	□□□□□ -1.87
CHMP4A-208	ENST00000534106	CLCN3	P51790	818 aa		3.36	□□□□□ -1.87
CHMP4A-208	ENST00000534106	CRYBB1	P53674	252 aa	Predicted RBP	3.36	□□□□□ -1.87
CHMP4A-208	ENST00000534106	POLG	P54098	1239 aa	Predicted RBP	3.36	□□□□□ -1.87
CHMP4A-208	ENST00000534106	NLRP11	P59045	1033 aa	Known RBP	3.36	□□□□□ -1.87
CHMP4A-208	ENST00000534106	ACTR2	P61160	394 aa		3.36	□□□□□ -1.87
CHMP4A-208	ENST00000534106	GNL2	Q13823	731 aa	Known RBP	3.36	□□□□□ -1.87
CHMP4A-208	ENST00000534106	ICAM4	Q14773	271 aa		3.36	□□□□□ -1.87
CHMP4A-208	ENST00000534106	ALX1	Q15699	326 aa		3.36	□□□□□ -1.87
CHMP4A-208	ENST00000534106	UBE2S	Q16763	222 aa		3.36	□□□□□ -1.87
CHMP4A-208	ENST00000534106	COL28A1	Q2UY09	1125 aa		3.36	□□□□□ -1.87
CHMP4A-208	ENST00000534106	ZNF394	Q53GI3	561 aa		3.36	□□□□□ -1.87
CHMP4A-208	ENST00000534106	TANGO2	Q6ICL3	276 aa		3.36	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms