RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 PIN1Q13526 163 aaPredicted RBP4.84□□□□□ -1.63
ITGB1-219ENST00000534049 PLS1Q14651 629 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 IQCB1Q15051 598 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 RABEP1Q15276 862 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 LONRF3Q496Y0 759 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 IFIT1BQ5T764 474 aaKnown RBP4.84□□□□□ -1.63
ITGB1-219ENST00000534049 FCRLBQ6BAA4 426 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 ZNF280DQ6N043 979 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 ZNF788Q6ZQV5 615 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 WDR53Q7Z5U6 358 aaPredicted RBP4.84□□□□□ -1.63
ITGB1-219ENST00000534049 DTX2Q86UW9 622 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 PPP1R3BQ86XI6 285 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 SH2D3CQ8N5H7 860 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 TBC1D5Q92609 795 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 RFKQ969G6 155 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 GPATCH3Q96I76 525 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 AIFM3Q96NN9 605 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 UBA5Q9GZZ9 404 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 SMOC2Q9H3U7 446 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 CXorf56Q9H5V9 222 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 NMRK2Q9NPI5 230 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 SERTAD4Q9NUC0 356 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 GOLGA6AQ9NYA3 693 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 HESX1Q9UBX0 185 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 SUFUQ9UMX1 484 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 SHOC2Q9UQ13 582 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 PCDHA1Q9Y5I3 950 aa4.84□□□□□ -1.63
ITGB1-219ENST00000534049 SLC16A3O15427 465 aaKnown RBP4.83□□□□□ -1.64
ITGB1-219ENST00000534049 AHSGP02765 367 aa4.83□□□□□ -1.64
ITGB1-219ENST00000534049 PRKCGP05129 697 aa4.83□□□□□ -1.64
ITGB1-219ENST00000534049 NR2F6P10588 404 aa4.83□□□□□ -1.64
ITGB1-219ENST00000534049 NDUFB7P17568 137 aa4.83□□□□□ -1.64
ITGB1-219ENST00000534049 LMO1P25800 156 aa4.83□□□□□ -1.64
ITGB1-219ENST00000534049 ITPKBP27987 946 aa4.83□□□□□ -1.64
ITGB1-219ENST00000534049 CASQ1P31415 396 aa4.83□□□□□ -1.64
ITGB1-219ENST00000534049 KCNJ5P48544 419 aa4.83□□□□□ -1.64
ITGB1-219ENST00000534049 PXNP49023 591 aaPredicted RBP4.83□□□□□ -1.64
ITGB1-219ENST00000534049 SOX8P57073 446 aa4.83□□□□□ -1.64
ITGB1-219ENST00000534049 SLC10A2Q12908 348 aaPredicted RBP4.83□□□□□ -1.64
ITGB1-219ENST00000534049 CHAF1AQ13111 956 aaPredicted RBP4.83□□□□□ -1.64
ITGB1-219ENST00000534049 TBCCQ15814 346 aa4.83□□□□□ -1.64
ITGB1-219ENST00000534049 KHDC1LQ5JSQ8 128 aa4.83□□□□□ -1.64
ITGB1-219ENST00000534049 KLHL10Q6JEL2 608 aa4.83□□□□□ -1.64
ITGB1-219ENST00000534049 ANKRD16Q6P6B7 361 aa4.83□□□□□ -1.64
ITGB1-219ENST00000534049 KRBA2Q6ZNG9 492 aa4.83□□□□□ -1.64
ITGB1-219ENST00000534049 SRRM1Q8IYB3 904 aaKnown RBP4.83□□□□□ -1.64
ITGB1-219ENST00000534049 GRAMD1CQ8IYS0 662 aa4.83□□□□□ -1.64
ITGB1-219ENST00000534049 ANKRD13AQ8IZ07 590 aa4.83□□□□□ -1.64
ITGB1-219ENST00000534049 NME8Q8N427 588 aa4.83□□□□□ -1.64
ITGB1-219ENST00000534049 FAM46DQ8NEK8 389 aa4.83□□□□□ -1.64
ITGB1-219ENST00000534049 PTDSS2Q9BVG9 487 aa4.83□□□□□ -1.64
ITGB1-219ENST00000534049 RANBP17Q9H2T7 1088 aaKnown RBP4.83□□□□□ -1.64
ITGB1-219ENST00000534049 ARHGEF3Q9NR81 526 aa4.83□□□□□ -1.64
ITGB1-219ENST00000534049 RSPH14Q9UHP6 348 aa4.83□□□□□ -1.64
ITGB1-219ENST00000534049 PADI4Q9UM07 663 aa4.83□□□□□ -1.64
ITGB1-219ENST00000534049 AGAP1Q9UPQ3 857 aa4.83□□□□□ -1.64
ITGB1-219ENST00000534049 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.83□□□□□ -1.64
ITGB1-219ENST00000534049 DDX49Q9Y6V7 483 aaKnown RBP4.83□□□□□ -1.64
ITGB1-219ENST00000534049 ZFYVE9O95405 1425 aa4.82□□□□□ -1.64
ITGB1-219ENST00000534049 SMG6Q86US8 1419 aaKnown RBP4.82□□□□□ -1.64
ITGB1-219ENST00000534049 A0A1B0GUL7 405 aa4.82□□□□□ -1.64
ITGB1-219ENST00000534049 VWC2LB2RUY7 222 aa4.82□□□□□ -1.64
ITGB1-219ENST00000534049 H3BML4 177 aa4.82□□□□□ -1.64
ITGB1-219ENST00000534049 MARCH6O60337 910 aa4.82□□□□□ -1.64
ITGB1-219ENST00000534049 REC8O95072 547 aa4.82□□□□□ -1.64
ITGB1-219ENST00000534049 RHOP08100 348 aa4.82□□□□□ -1.64
ITGB1-219ENST00000534049 PDGFRBP09619 1106 aa4.82□□□□□ -1.64
ITGB1-219ENST00000534049 EBLN1P0CF75 366 aa4.82□□□□□ -1.64
ITGB1-219ENST00000534049 CHRM3P20309 590 aa4.82□□□□□ -1.64
ITGB1-219ENST00000534049 DRD4P21917 467 aa4.82□□□□□ -1.64
ITGB1-219ENST00000534049 TOB1P50616 345 aaPredicted RBP4.82□□□□□ -1.64
ITGB1-219ENST00000534049 EPHB1P54762 984 aa4.82□□□□□ -1.64
ITGB1-219ENST00000534049 EXOSC9Q06265 439 aaKnown RBP4.82□□□□□ -1.64
ITGB1-219ENST00000534049 TRAF1Q13077 416 aa4.82□□□□□ -1.64
ITGB1-219ENST00000534049 GTF2H3Q13889 308 aa4.82□□□□□ -1.64
ITGB1-219ENST00000534049 FGL2Q14314 439 aa4.82□□□□□ -1.64
ITGB1-219ENST00000534049 TTF1Q15361 905 aaPredicted RBP4.82□□□□□ -1.64
ITGB1-219ENST00000534049 ZSCAN26Q16670 478 aa4.82□□□□□ -1.64
ITGB1-219ENST00000534049 HSP90AB2PQ58FF8 381 aa4.82□□□□□ -1.64
ITGB1-219ENST00000534049 AARS2Q5JTZ9 985 aaKnown RBP4.82□□□□□ -1.64
ITGB1-219ENST00000534049 CEP85Q6P2H3 762 aa4.82□□□□□ -1.64
ITGB1-219ENST00000534049 TMEM108Q6UXF1 575 aa4.82□□□□□ -1.64
ITGB1-219ENST00000534049 DENND1CQ8IV53 801 aa4.82□□□□□ -1.64
ITGB1-219ENST00000534049 SUGP1Q8IWZ8 645 aaKnown RBP4.82□□□□□ -1.64
ITGB1-219ENST00000534049 FAM184AQ8NB25 1140 aa4.82□□□□□ -1.64
ITGB1-219ENST00000534049 KLHDC4Q8TBB5 520 aa4.82□□□□□ -1.64
ITGB1-219ENST00000534049 SLC46A1Q96NT5 459 aa4.82□□□□□ -1.64
ITGB1-219ENST00000534049 CGRRF1Q99675 332 aa4.82□□□□□ -1.64
ITGB1-219ENST00000534049 PIH1D1Q9NWS0 290 aaKnown RBP4.82□□□□□ -1.64
ITGB1-219ENST00000534049 CHCHD3Q9NX63 227 aaKnown RBP4.82□□□□□ -1.64
ITGB1-219ENST00000534049 DDX56Q9NY93 547 aaKnown RBP4.82□□□□□ -1.64
ITGB1-219ENST00000534049 MED16Q9Y2X0 877 aa4.82□□□□□ -1.64
ITGB1-219ENST00000534049 TNFRSF18Q9Y5U5 241 aa4.82□□□□□ -1.64
ITGB1-219ENST00000534049 TET3O43151 1660 aa4.82□□□□□ -1.64
ITGB1-219ENST00000534049 NKTRP30414 1462 aaKnown RBP4.81□□□□□ -1.64
ITGB1-219ENST00000534049 RPRD2Q5VT52 1461 aaKnown RBP4.81□□□□□ -1.64
ITGB1-219ENST00000534049 XIRP1Q702N8 1843 aaKnown RBP4.81□□□□□ -1.64
ITGB1-219ENST00000534049 DISP3Q9P2K9 1392 aa4.81□□□□□ -1.64
ITGB1-219ENST00000534049 INO80B-WBP1J3KQ70 363 aa4.81□□□□□ -1.64
ITGB1-219ENST00000534049 MYO1CO00159 1063 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms