RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 M0QYV0 167 aa14.12□□□□□ -0.15
CMTM1-219ENST00000533953 MDM4O15151 490 aa14.12□□□□□ -0.15
CMTM1-219ENST00000533953 EPHB6O15197 1021 aa14.12□□□□□ -0.15
CMTM1-219ENST00000533953 COCHO43405 550 aa14.12□□□□□ -0.15
CMTM1-219ENST00000533953 ZDHHC11BP0C7U3 371 aa14.12□□□□□ -0.15
CMTM1-219ENST00000533953 DDX6P26196 483 aaKnown RBP eCLIP14.12□□□□□ -0.15
CMTM1-219ENST00000533953 SOX9P48436 509 aa14.12□□□□□ -0.15
CMTM1-219ENST00000533953 VCPP55072 806 aaKnown RBP14.12□□□□□ -0.15
CMTM1-219ENST00000533953 RAPGEF1Q13905 1077 aa14.12□□□□□ -0.15
CMTM1-219ENST00000533953 DRAP1Q14919 205 aaPredicted RBP14.12□□□□□ -0.15
CMTM1-219ENST00000533953 CNGA2Q16280 664 aa14.12□□□□□ -0.15
CMTM1-219ENST00000533953 PKDCCQ504Y2 493 aa14.12□□□□□ -0.15
CMTM1-219ENST00000533953 LCLAT1Q6UWP7 414 aa14.12□□□□□ -0.15
CMTM1-219ENST00000533953 SH3RF2Q8TEC5 729 aa14.12□□□□□ -0.15
CMTM1-219ENST00000533953 SHC3Q92529 594 aa14.12□□□□□ -0.15
CMTM1-219ENST00000533953 ULBP1Q9BZM6 244 aa14.12□□□□□ -0.15
CMTM1-219ENST00000533953 NAT10Q9H0A0 1025 aaKnown RBP14.12□□□□□ -0.15
CMTM1-219ENST00000533953 LINC00597Q9H2U6 94 aa14.12□□□□□ -0.15
CMTM1-219ENST00000533953 FAM124BQ9H5Z6 455 aaPredicted RBP14.12□□□□□ -0.15
CMTM1-219ENST00000533953 ARHGEF3Q9NR81 526 aa14.12□□□□□ -0.15
CMTM1-219ENST00000533953 GTSE1Q9NYZ3 720 aa14.12□□□□□ -0.15
CMTM1-219ENST00000533953 EHD2Q9NZN4 543 aa14.12□□□□□ -0.15
CMTM1-219ENST00000533953 HESX1Q9UBX0 185 aa14.12□□□□□ -0.15
CMTM1-219ENST00000533953 KIAA1257Q9ULG3 409 aa14.12□□□□□ -0.15
CMTM1-219ENST00000533953 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.12□□□□□ -0.15
CMTM1-219ENST00000533953 SCML2Q9UQR0 700 aa14.12□□□□□ -0.15
CMTM1-219ENST00000533953 MTF2Q9Y483 593 aaPredicted RBP14.12□□□□□ -0.15
CMTM1-219ENST00000533953 CPQQ9Y646 472 aa14.12□□□□□ -0.15
CMTM1-219ENST00000533953 PTPRDP23468 1912 aa14.11□□□□□ -0.15
CMTM1-219ENST00000533953 SHISA7A6NL88 538 aa14.11□□□□□ -0.15
CMTM1-219ENST00000533953 TEX33O43247 280 aa14.11□□□□□ -0.15
CMTM1-219ENST00000533953 THAP12O43422 761 aa14.11□□□□□ -0.15
CMTM1-219ENST00000533953 OAS1P00973 400 aaKnown RBP14.11□□□□□ -0.15
CMTM1-219ENST00000533953 MBL2P11226 248 aaPredicted RBP14.11□□□□□ -0.15
CMTM1-219ENST00000533953 LCP1P13796 627 aa14.11□□□□□ -0.15
CMTM1-219ENST00000533953 ARSAP15289 507 aa14.11□□□□□ -0.15
CMTM1-219ENST00000533953 PTMSP20962 102 aa14.11□□□□□ -0.15
CMTM1-219ENST00000533953 WEE1P30291 646 aa14.11□□□□□ -0.15
CMTM1-219ENST00000533953 TKTL1P51854 596 aa14.11□□□□□ -0.15
CMTM1-219ENST00000533953 BCAT1P54687 386 aa14.11□□□□□ -0.15
CMTM1-219ENST00000533953 FCHO2Q0JRZ9 810 aa14.11□□□□□ -0.15
CMTM1-219ENST00000533953 BST2Q10589 180 aaKnown RBP14.11□□□□□ -0.15
CMTM1-219ENST00000533953 SYCP1Q15431 976 aa14.11□□□□□ -0.15
CMTM1-219ENST00000533953 HECTD3Q5T447 861 aa14.11□□□□□ -0.15
CMTM1-219ENST00000533953 PMF1Q6P1K2 205 aa14.11□□□□□ -0.15
CMTM1-219ENST00000533953 LUZP1Q86V48 1076 aa14.11□□□□□ -0.15
CMTM1-219ENST00000533953 FBXL6Q8N531 539 aa14.11□□□□□ -0.15
CMTM1-219ENST00000533953 DEPDC1BQ8WUY9 529 aa14.11□□□□□ -0.15
CMTM1-219ENST00000533953 ZNF606Q8WXB4 792 aa14.11□□□□□ -0.15
CMTM1-219ENST00000533953 BPIFA3Q9BQP9 254 aa14.11□□□□□ -0.15
CMTM1-219ENST00000533953 FOXQ1Q9C009 403 aa14.11□□□□□ -0.15
CMTM1-219ENST00000533953 MFSD1Q9H3U5 465 aa14.11□□□□□ -0.15
CMTM1-219ENST00000533953 TBC1D17Q9HA65 648 aa14.11□□□□□ -0.15
CMTM1-219ENST00000533953 FAM207AQ9NSI2 230 aaPredicted RBP14.11□□□□□ -0.15
CMTM1-219ENST00000533953 COMMD8Q9NX08 183 aa14.11□□□□□ -0.15
CMTM1-219ENST00000533953 WNT6Q9Y6F9 365 aa14.11□□□□□ -0.15
CMTM1-219ENST00000533953 USP3Q9Y6I4 520 aa14.11□□□□□ -0.15
CMTM1-219ENST00000533953 OTOL1A6NHN0 477 aaPredicted RBP14.1□□□□□ -0.15
CMTM1-219ENST00000533953 LRRC10BA6NIK2 292 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 SMTNL1A8MU46 457 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 LGALS16A8MUM7 142 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 LEFTY2O00292 366 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 ARNTLO00327 626 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 XPO1O14980 1071 aaKnown RBP14.1□□□□□ -0.15
CMTM1-219ENST00000533953 UCHL3P15374 230 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 GNA15P30679 374 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 CLCN1P35523 988 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 PPP3CCP48454 512 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 UBXN1Q04323 297 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 ADIGQ0VDE8 80 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 MLF2Q15773 248 aaPredicted RBP14.1□□□□□ -0.15
CMTM1-219ENST00000533953 ZNF77Q15935 545 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 SKOR2Q2VWA4 1001 aaPredicted RBP14.1□□□□□ -0.15
CMTM1-219ENST00000533953 RAB41Q5JT25 222 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 FKBP15Q5T1M5 1219 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 CWF19L1Q69YN2 538 aaKnown RBP14.1□□□□□ -0.15
CMTM1-219ENST00000533953 TPRG1Q6ZUI0 275 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 ENOSF1Q7L5Y1 443 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 BMP8AQ7Z5Y6 402 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 SLC47A2Q86VL8 602 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 PASD1Q8IV76 773 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 TMEM105Q8N8V8 129 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 PDZD8Q8NEN9 1154 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 CLEC4CQ8WTT0 213 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 SLC35F5Q8WV83 523 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 E2F7Q96AV8 911 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 PCMTD1Q96MG8 357 aaPredicted RBP14.1□□□□□ -0.15
CMTM1-219ENST00000533953 NAA15Q9BXJ9 866 aaKnown RBP14.1□□□□□ -0.15
CMTM1-219ENST00000533953 UBXN6Q9BZV1 441 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 GANQ9H2C0 597 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 FBXO44Q9H4M3 255 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 EBF3Q9H4W6 596 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 LRRC4Q9HBW1 653 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 NLRC4Q9NPP4 1024 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 PLCB1Q9NQ66 1216 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 CFAP97Q9P2B7 532 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 CYTH4Q9UIA0 394 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 NAGPAQ9UK23 515 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 ARHGAP26Q9UNA1 814 aa14.1□□□□□ -0.15
CMTM1-219ENST00000533953 SIK3Q9Y2K2 1263 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms