RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 F11P03951 625 aa16.4■□□□□ 0.22
CTTN-215ENST00000533931 GLI1P08151 1106 aa16.4■□□□□ 0.22
CTTN-215ENST00000533931 MMP8P22894 467 aa16.4■□□□□ 0.22
CTTN-215ENST00000533931 NSFP46459 744 aaKnown RBP16.4■□□□□ 0.22
CTTN-215ENST00000533931 CDR1P51861 262 aa16.4■□□□□ 0.22
CTTN-215ENST00000533931 GSCP56915 257 aaPredicted RBP16.4■□□□□ 0.22
CTTN-215ENST00000533931 USP46P62068 366 aa16.4■□□□□ 0.22
CTTN-215ENST00000533931 ADIGQ0VDE8 80 aa16.4■□□□□ 0.22
CTTN-215ENST00000533931 MTMR3Q13615 1198 aa16.4■□□□□ 0.22
CTTN-215ENST00000533931 BEND5Q7L4P6 421 aa16.4■□□□□ 0.22
CTTN-215ENST00000533931 PHF13Q86YI8 300 aaPredicted RBP16.4■□□□□ 0.22
CTTN-215ENST00000533931 PASD1Q8IV76 773 aa16.4■□□□□ 0.22
CTTN-215ENST00000533931 SCAMP5Q8TAC9 235 aa16.4■□□□□ 0.22
CTTN-215ENST00000533931 SLC30A5Q8TAD4 765 aa16.4■□□□□ 0.22
CTTN-215ENST00000533931 GPR152Q8TDT2 470 aa16.4■□□□□ 0.22
CTTN-215ENST00000533931 FBXO32Q969P5 355 aa16.4■□□□□ 0.22
CTTN-215ENST00000533931 CDK5RAP1Q96SZ6 601 aaKnown RBP16.4■□□□□ 0.22
CTTN-215ENST00000533931 ZNF334Q9HCZ1 680 aaPredicted RBP16.4■□□□□ 0.22
CTTN-215ENST00000533931 ASNSD1Q9NWL6 643 aa16.4■□□□□ 0.22
CTTN-215ENST00000533931 HCFC1R1Q9NWW0 138 aa16.4■□□□□ 0.22
CTTN-215ENST00000533931 CLIC5Q9NZA1 410 aa16.4■□□□□ 0.22
CTTN-215ENST00000533931 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.4■□□□□ 0.22
CTTN-215ENST00000533931 TRPM5Q9NZQ8 1165 aa16.4■□□□□ 0.22
CTTN-215ENST00000533931 CYTH4Q9UIA0 394 aa16.4■□□□□ 0.22
CTTN-215ENST00000533931 STRIP2Q9ULQ0 834 aa16.4■□□□□ 0.22
CTTN-215ENST00000533931 USTQ9Y2C2 406 aa16.4■□□□□ 0.22
CTTN-215ENST00000533931 MRPS23Q9Y3D9 190 aaKnown RBP16.4■□□□□ 0.22
CTTN-215ENST00000533931 GRXCR2A6NFK2 248 aa16.39■□□□□ 0.21
CTTN-215ENST00000533931 SKILP12757 684 aa16.39■□□□□ 0.21
CTTN-215ENST00000533931 FSHRP23945 695 aa16.39■□□□□ 0.21
CTTN-215ENST00000533931 GABRR2P28476 465 aa16.39■□□□□ 0.21
CTTN-215ENST00000533931 WEE1P30291 646 aa16.39■□□□□ 0.21
CTTN-215ENST00000533931 C1QBPQ07021 282 aaKnown RBP16.39■□□□□ 0.21
CTTN-215ENST00000533931 TAF10Q12962 218 aa16.39■□□□□ 0.21
CTTN-215ENST00000533931 SMAD2Q15796 467 aaKnown RBP16.39■□□□□ 0.21
CTTN-215ENST00000533931 ARHGAP15Q53QZ3 475 aa16.39■□□□□ 0.21
CTTN-215ENST00000533931 NAA35Q5VZE5 725 aa16.39■□□□□ 0.21
CTTN-215ENST00000533931 GAREM2Q75VX8 874 aa16.39■□□□□ 0.21
CTTN-215ENST00000533931 TMEM150AQ86TG1 271 aa16.39■□□□□ 0.21
CTTN-215ENST00000533931 ERICH1Q86X53 443 aa16.39■□□□□ 0.21
CTTN-215ENST00000533931 STKLD1Q8NE28 680 aa16.39■□□□□ 0.21
CTTN-215ENST00000533931 ATXN2LQ8WWM7 1075 aaKnown RBP16.39■□□□□ 0.21
CTTN-215ENST00000533931 MRPS31Q92665 395 aaKnown RBP16.39■□□□□ 0.21
CTTN-215ENST00000533931 C18orf8Q96DM3 657 aa16.39■□□□□ 0.21
CTTN-215ENST00000533931 CPXM1Q96SM3 734 aa16.39■□□□□ 0.21
CTTN-215ENST00000533931 PCDHB18PQ96TA0 734 aa16.39■□□□□ 0.21
CTTN-215ENST00000533931 TLR8Q9NR97 1041 aaKnown RBP16.39■□□□□ 0.21
CTTN-215ENST00000533931 ST7Q9NRC1 585 aa16.39■□□□□ 0.21
CTTN-215ENST00000533931 GDE1Q9NZC3 331 aa16.39■□□□□ 0.21
CTTN-215ENST00000533931 WDR35Q9P2L0 1181 aa16.39■□□□□ 0.21
CTTN-215ENST00000533931 MAGED2Q9UNF1 606 aaPredicted RBP16.39■□□□□ 0.21
CTTN-215ENST00000533931 ZNF840PA6NDX5 716 aa16.38■□□□□ 0.21
CTTN-215ENST00000533931 E5RJQ4 531 aa16.38■□□□□ 0.21
CTTN-215ENST00000533931 DDX3XO00571 662 aaKnown RBP eCLIP16.38■□□□□ 0.21
CTTN-215ENST00000533931 GABBR2O75899 941 aa16.38■□□□□ 0.21
CTTN-215ENST00000533931 CALB1P05937 261 aa16.38■□□□□ 0.21
CTTN-215ENST00000533931 MYL4P12829 197 aa16.38■□□□□ 0.21
CTTN-215ENST00000533931 SSTR3P32745 418 aaPredicted RBP16.38■□□□□ 0.21
CTTN-215ENST00000533931 RGS7P49802 495 aa16.38■□□□□ 0.21
CTTN-215ENST00000533931 DAOAP59103 153 aa16.38■□□□□ 0.21
CTTN-215ENST00000533931 ASTE1Q2TB18 679 aaPredicted RBP16.38■□□□□ 0.21
CTTN-215ENST00000533931 PTPN20Q4JDL3 420 aa16.38■□□□□ 0.21
CTTN-215ENST00000533931 ACAD10Q6JQN1 1059 aa16.38■□□□□ 0.21
CTTN-215ENST00000533931 TOGARAM2Q6ZUX3 1019 aa16.38■□□□□ 0.21
CTTN-215ENST00000533931 TADA2BQ86TJ2 420 aa16.38■□□□□ 0.21
CTTN-215ENST00000533931 TMTC1Q8IUR5 882 aa16.38■□□□□ 0.21
CTTN-215ENST00000533931 CCDC170Q8IYT3 715 aa16.38■□□□□ 0.21
CTTN-215ENST00000533931 HS6ST3Q8IZP7 471 aa16.38■□□□□ 0.21
CTTN-215ENST00000533931 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.38■□□□□ 0.21
CTTN-215ENST00000533931 SHKBP1Q8TBC3 707 aa16.38■□□□□ 0.21
CTTN-215ENST00000533931 TRIM11Q96F44 468 aa16.38■□□□□ 0.21
CTTN-215ENST00000533931 APOL5Q9BWW9 433 aa16.38■□□□□ 0.21
CTTN-215ENST00000533931 ULBP1Q9BZM6 244 aa16.38■□□□□ 0.21
CTTN-215ENST00000533931 SYNCQ9H7C4 482 aa16.38■□□□□ 0.21
CTTN-215ENST00000533931 PAPSS1O43252 624 aaPredicted RBP16.37■□□□□ 0.21
CTTN-215ENST00000533931 RTN2O75298 545 aa16.37■□□□□ 0.21
CTTN-215ENST00000533931 MOSPD3O75425 235 aa16.37■□□□□ 0.21
CTTN-215ENST00000533931 TADA3O75528 432 aa16.37■□□□□ 0.21
CTTN-215ENST00000533931 EIF4A3P38919 411 aaKnown RBP16.37■□□□□ 0.21
CTTN-215ENST00000533931 CCR2P41597 374 aa16.37■□□□□ 0.21
CTTN-215ENST00000533931 NTHL1P78549 312 aa16.37■□□□□ 0.21
CTTN-215ENST00000533931 MRPS5P82675 430 aaKnown RBP16.37■□□□□ 0.21
CTTN-215ENST00000533931 ZNF268Q14587 947 aaPredicted RBP16.37■□□□□ 0.21
CTTN-215ENST00000533931 CLUL1Q15846 466 aa16.37■□□□□ 0.21
CTTN-215ENST00000533931 SLC18A3Q16572 532 aa16.37■□□□□ 0.21
CTTN-215ENST00000533931 SLC5A9Q2M3M2 681 aa16.37■□□□□ 0.21
CTTN-215ENST00000533931 PTCRAQ6ISU1 281 aaPredicted RBP16.37■□□□□ 0.21
CTTN-215ENST00000533931 KLHDC10Q6PID8 442 aa16.37■□□□□ 0.21
CTTN-215ENST00000533931 MON1BQ7L1V2 547 aa16.37■□□□□ 0.21
CTTN-215ENST00000533931 ARCQ7LC44 396 aa16.37■□□□□ 0.21
CTTN-215ENST00000533931 OTOP3Q7RTS5 596 aa16.37■□□□□ 0.21
CTTN-215ENST00000533931 BHLHA9Q7RTU4 235 aa16.37■□□□□ 0.21
CTTN-215ENST00000533931 GOLGA1Q92805 767 aa16.37■□□□□ 0.21
CTTN-215ENST00000533931 PDLIM2Q96JY6 352 aa16.37■□□□□ 0.21
CTTN-215ENST00000533931 CCDC42Q96M95 316 aa16.37■□□□□ 0.21
CTTN-215ENST00000533931 PHF7Q9BWX1 381 aaPredicted RBP16.37■□□□□ 0.21
CTTN-215ENST00000533931 ISCUQ9H1K1 167 aa16.37■□□□□ 0.21
CTTN-215ENST00000533931 ATXN3LQ9H3M9 355 aa16.37■□□□□ 0.21
CTTN-215ENST00000533931 POMKQ9H5K3 350 aa16.37■□□□□ 0.21
CTTN-215ENST00000533931 TASP1Q9H6P5 420 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms