RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 BCCIPQ9P287 314 aaKnown RBP eCLIP7.48□□□□□ -1.21
RNPC3-209ENST00000533834 STRIP2Q9ULQ0 834 aa7.48□□□□□ -1.21
RNPC3-209ENST00000533834 USP18Q9UMW8 372 aa7.48□□□□□ -1.21
RNPC3-209ENST00000533834 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.48□□□□□ -1.21
RNPC3-209ENST00000533834 GJA3Q9Y6H8 435 aa7.48□□□□□ -1.21
RNPC3-209ENST00000533834 FAM159BA6NKW6 160 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 ZNF195O14628 629 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 CHADO15335 359 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 ITGB3P05106 788 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 VDRP11473 427 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 INSRRP14616 1297 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 NQO1P15559 274 aaKnown RBP7.47□□□□□ -1.21
RNPC3-209ENST00000533834 SSTR1P30872 391 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 ADCY8P40145 1251 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 LMNB2Q03252 620 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 MYO1EQ12965 1108 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 SMTNL2Q2TAL5 461 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 CMPK2Q5EBM0 449 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 PPP1R26Q5T8A7 1209 aaPredicted RBP7.47□□□□□ -1.21
RNPC3-209ENST00000533834 CD300LGQ6UXG3 332 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 MICALCLQ6ZW33 695 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 ARMCX2Q7L311 632 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 NT5DC4Q86YG4 428 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 GSTCDQ8NEC7 633 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 CPB2Q96IY4 423 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 PKMYT1Q99640 499 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 LPIN3Q9BQK8 851 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 PCDH18Q9HCL0 1135 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 GDAP2Q9NXN4 497 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 SLC17A7Q9P2U7 560 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 ASIC3Q9UHC3 531 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 ZNF180Q9UJW8 692 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 BARX2Q9UMQ3 279 aaPredicted RBP7.47□□□□□ -1.21
RNPC3-209ENST00000533834 PLA2G4CQ9UP65 541 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 ARL2BPQ9Y2Y0 163 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 KAT6AQ92794 2004 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 A0A087WZ62 844 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 TCRBV9S1A1TA0A576 114 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 VAV1P15498 845 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 SMPD1P17405 629 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 GCKP35557 465 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 PTPN9P43378 593 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 NKX3-2P78367 333 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 GPS1Q13098 491 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 IRF5Q13568 498 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 C15orf59Q2T9L4 293 aaPredicted RBP7.47□□□□□ -1.21
RNPC3-209ENST00000533834 DNAJC24Q6P3W2 148 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 TAOK1Q7L7X3 1001 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 RHPN2Q8IUC4 686 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 CRYBG2Q8N1P7 616 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 TMEM151AQ8N4L1 468 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 C12orf29Q8N999 325 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 ZNF419Q96HQ0 510 aaPredicted RBP7.47□□□□□ -1.21
RNPC3-209ENST00000533834 FDXACB1Q9BRP7 624 aaPredicted RBP7.47□□□□□ -1.21
RNPC3-209ENST00000533834 C12orf65Q9H3J6 166 aaKnown RBP7.47□□□□□ -1.21
RNPC3-209ENST00000533834 ELP3Q9H9T3 547 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 PRMT7Q9NVM4 692 aaPredicted RBP7.47□□□□□ -1.21
RNPC3-209ENST00000533834 WDR35Q9P2L0 1181 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 SLC15A5A6NIM6 579 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 HHLA1C9JL84 531 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 MMP3P08254 477 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 KRT3P12035 628 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 GEMIN4P57678 1058 aaKnown RBP7.47□□□□□ -1.21
RNPC3-209ENST00000533834 CALCOCO2Q13137 446 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 NCBP2-AS2Q69YL0 99 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 EXOC8Q8IYI6 725 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 ZNF398Q8TD17 642 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 CLEC4CQ8WTT0 213 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 TGS1Q96RS0 853 aaKnown RBP7.47□□□□□ -1.21
RNPC3-209ENST00000533834 PTPN18Q99952 460 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 KLC2Q9H0B6 622 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 DPEP3Q9H4B8 488 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 SIRPGQ9P1W8 387 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 KLHL14Q9P2G3 628 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 MFHAS1Q9Y4C4 1052 aa7.47□□□□□ -1.21
RNPC3-209ENST00000533834 CST8O60676 142 aa7.46□□□□□ -1.21
RNPC3-209ENST00000533834 GCATO75600 419 aa7.46□□□□□ -1.21
RNPC3-209ENST00000533834 SRGAP2CP0DJJ0 459 aa7.46□□□□□ -1.21
RNPC3-209ENST00000533834 TKTP29401 623 aaKnown RBP7.46□□□□□ -1.21
RNPC3-209ENST00000533834 NDST1P52848 882 aa7.46□□□□□ -1.21
RNPC3-209ENST00000533834 SOX4Q06945 474 aaPredicted RBP7.46□□□□□ -1.21
RNPC3-209ENST00000533834 CDK18Q07002 472 aa7.46□□□□□ -1.21
RNPC3-209ENST00000533834 NR1H3Q13133 447 aa7.46□□□□□ -1.21
RNPC3-209ENST00000533834 ACCSLQ4AC99 568 aa7.46□□□□□ -1.21
RNPC3-209ENST00000533834 ZNF394Q53GI3 561 aa7.46□□□□□ -1.21
RNPC3-209ENST00000533834 TIFABQ6ZNK6 161 aa7.46□□□□□ -1.21
RNPC3-209ENST00000533834 ERICH1Q86X53 443 aa7.46□□□□□ -1.21
RNPC3-209ENST00000533834 ARRDC4Q8NCT1 418 aa7.46□□□□□ -1.21
RNPC3-209ENST00000533834 MCUQ8NE86 351 aa7.46□□□□□ -1.21
RNPC3-209ENST00000533834 OPTNQ96CV9 577 aa7.46□□□□□ -1.21
RNPC3-209ENST00000533834 SPATA33Q96N06 139 aa7.46□□□□□ -1.21
RNPC3-209ENST00000533834 ZNF570Q96NI8 536 aa7.46□□□□□ -1.21
RNPC3-209ENST00000533834 SAYSD1Q9NPB0 183 aa7.46□□□□□ -1.21
RNPC3-209ENST00000533834 SF3B1O75533 1304 aaKnown RBP eCLIP7.46□□□□□ -1.218e-6■■■■■ 107
RNPC3-209ENST00000533834 CFAP73A6NFT4 308 aa7.46□□□□□ -1.22
RNPC3-209ENST00000533834 C2CD2LO14523 706 aa7.46□□□□□ -1.22
RNPC3-209ENST00000533834 GABRDO14764 452 aa7.46□□□□□ -1.22
RNPC3-209ENST00000533834 CACNG3O60359 315 aa7.46□□□□□ -1.22
RNPC3-209ENST00000533834 PEX11AO75192 247 aa7.46□□□□□ -1.22
RNPC3-209ENST00000533834 PIAS1O75925 651 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms