RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 GRIA4P48058 902 aa11.36□□□□□ -0.59
CSDE1-215ENST00000533818 TPMTP51580 245 aa11.36□□□□□ -0.59
CSDE1-215ENST00000533818 LILRA4P59901 499 aa11.36□□□□□ -0.59
CSDE1-215ENST00000533818 RPL10AP62906 217 aaKnown RBP11.36□□□□□ -0.59
CSDE1-215ENST00000533818 INSM1Q01101 510 aaPredicted RBP11.36□□□□□ -0.59
CSDE1-215ENST00000533818 DDR2Q16832 855 aa11.36□□□□□ -0.59
CSDE1-215ENST00000533818 KCNT1Q5JUK3 1230 aa11.36□□□□□ -0.59
CSDE1-215ENST00000533818 LAYNQ6UX15 382 aa11.36□□□□□ -0.59
CSDE1-215ENST00000533818 BLIDQ8IZY5 108 aa11.36□□□□□ -0.59
CSDE1-215ENST00000533818 THEM5Q8N1Q8 247 aa11.36□□□□□ -0.59
CSDE1-215ENST00000533818 EID2Q8N6I1 236 aa11.36□□□□□ -0.59
CSDE1-215ENST00000533818 TERB1Q8NA31 727 aa11.36□□□□□ -0.59
CSDE1-215ENST00000533818 RFFLQ8WZ73 363 aa11.36□□□□□ -0.59
CSDE1-215ENST00000533818 VCPIP1Q96JH7 1222 aa11.36□□□□□ -0.59
CSDE1-215ENST00000533818 IFT74Q96LB3 600 aa11.36□□□□□ -0.59
CSDE1-215ENST00000533818 MMS19Q96T76 1030 aa11.36□□□□□ -0.59
CSDE1-215ENST00000533818 NUP58Q9BVL2 599 aa11.36□□□□□ -0.59
CSDE1-215ENST00000533818 TARS2Q9BW92 718 aaKnown RBP11.36□□□□□ -0.59
CSDE1-215ENST00000533818 TM9SF3Q9HD45 589 aa11.36□□□□□ -0.59
CSDE1-215ENST00000533818 ADAMTS1Q9UHI8 967 aa11.36□□□□□ -0.59
CSDE1-215ENST00000533818 SETD2Q9BYW2 2564 aaPredicted RBP11.35□□□□□ -0.59
CSDE1-215ENST00000533818 MYLKQ15746 1914 aa11.35□□□□□ -0.59
CSDE1-215ENST00000533818 DENND4CQ5VZ89 1909 aa11.35□□□□□ -0.59
CSDE1-215ENST00000533818 A0A1B0GTQ1 180 aa11.35□□□□□ -0.59
CSDE1-215ENST00000533818 M0R2N6 131 aa11.35□□□□□ -0.59
CSDE1-215ENST00000533818 CCNT1O60563 726 aaKnown RBP11.35□□□□□ -0.59
CSDE1-215ENST00000533818 CYP11A1P05108 521 aa11.35□□□□□ -0.59
CSDE1-215ENST00000533818 GCFC2P16383 781 aaKnown RBP11.35□□□□□ -0.59
CSDE1-215ENST00000533818 ABCB4P21439 1286 aa11.35□□□□□ -0.59
CSDE1-215ENST00000533818 CTSKP43235 329 aa11.35□□□□□ -0.59
CSDE1-215ENST00000533818 LSSP48449 732 aa11.35□□□□□ -0.59
CSDE1-215ENST00000533818 GUCY2FP51841 1108 aa11.35□□□□□ -0.59
CSDE1-215ENST00000533818 FOSBP53539 338 aa11.35□□□□□ -0.59
CSDE1-215ENST00000533818 INHBCP55103 352 aa11.35□□□□□ -0.59
CSDE1-215ENST00000533818 EXOSC10Q01780 885 aaKnown RBP11.35□□□□□ -0.59
CSDE1-215ENST00000533818 GAD2Q05329 585 aa11.35□□□□□ -0.59
CSDE1-215ENST00000533818 SAFBQ15424 915 aaKnown RBP eCLIP11.35□□□□□ -0.59
CSDE1-215ENST00000533818 IGFBP7Q16270 282 aa11.35□□□□□ -0.59
CSDE1-215ENST00000533818 ARL13BQ3SXY8 428 aa11.35□□□□□ -0.59
CSDE1-215ENST00000533818 SEZ6Q53EL9 994 aa11.35□□□□□ -0.59
CSDE1-215ENST00000533818 SGO2Q562F6 1265 aa11.35□□□□□ -0.59
CSDE1-215ENST00000533818 PRAMEF14Q5SWL7 426 aa11.35□□□□□ -0.59
CSDE1-215ENST00000533818 METTL23Q86XA0 190 aa11.35□□□□□ -0.59
CSDE1-215ENST00000533818 ETFBKMTQ8IXQ9 262 aa11.35□□□□□ -0.59
CSDE1-215ENST00000533818 SLFN12Q8IYM2 578 aa11.35□□□□□ -0.59
CSDE1-215ENST00000533818 DCP1BQ8IZD4 617 aaKnown RBP11.35□□□□□ -0.59
CSDE1-215ENST00000533818 SEMA3CQ99985 751 aa11.35□□□□□ -0.59
CSDE1-215ENST00000533818 SLC26A6Q9BXS9 759 aa11.35□□□□□ -0.59
CSDE1-215ENST00000533818 MRPL4Q9BYD3 311 aaKnown RBP11.35□□□□□ -0.59
CSDE1-215ENST00000533818 POLD4Q9HCU8 107 aa11.35□□□□□ -0.59
CSDE1-215ENST00000533818 THSD1Q9NS62 852 aa11.35□□□□□ -0.59
CSDE1-215ENST00000533818 DSEQ9UL01 958 aa11.35□□□□□ -0.59
CSDE1-215ENST00000533818 UBQLN1Q9UMX0 589 aaKnown RBP11.35□□□□□ -0.59
CSDE1-215ENST00000533818 PPEF2O14830 753 aa11.34□□□□□ -0.59
CSDE1-215ENST00000533818 TRIM24O15164 1050 aa11.34□□□□□ -0.59
CSDE1-215ENST00000533818 FAM87AP0C7U9 286 aa11.34□□□□□ -0.59
CSDE1-215ENST00000533818 CYP11B2P19099 503 aa11.34□□□□□ -0.59
CSDE1-215ENST00000533818 CYP3A5P20815 502 aa11.34□□□□□ -0.59
CSDE1-215ENST00000533818 GRIK1P39086 918 aa11.34□□□□□ -0.59
CSDE1-215ENST00000533818 FOXK1P85037 733 aa11.34□□□□□ -0.59
CSDE1-215ENST00000533818 ORC1Q13415 861 aa11.34□□□□□ -0.59
CSDE1-215ENST00000533818 ZBTB6Q15916 424 aa11.34□□□□□ -0.59
CSDE1-215ENST00000533818 CREB3L3Q68CJ9 461 aa11.34□□□□□ -0.59
CSDE1-215ENST00000533818 MPZL3Q6UWV2 235 aa11.34□□□□□ -0.59
CSDE1-215ENST00000533818 ADAT2Q7Z6V5 191 aaKnown RBP11.34□□□□□ -0.59
CSDE1-215ENST00000533818 EXTL1Q92935 676 aa11.34□□□□□ -0.59
CSDE1-215ENST00000533818 CCDC97Q96F63 343 aaPredicted RBP11.34□□□□□ -0.59
CSDE1-215ENST00000533818 RNF26Q9BY78 433 aaPredicted RBP11.34□□□□□ -0.59
CSDE1-215ENST00000533818 PCED1AQ9H1Q7 454 aa11.34□□□□□ -0.59
CSDE1-215ENST00000533818 POLR1BQ9H9Y6 1135 aa11.34□□□□□ -0.59
CSDE1-215ENST00000533818 OSGEPQ9NPF4 335 aa11.34□□□□□ -0.59
CSDE1-215ENST00000533818 ASCL3Q9NQ33 180 aa11.34□□□□□ -0.59
CSDE1-215ENST00000533818 TMLHEQ9NVH6 421 aa11.34□□□□□ -0.59
CSDE1-215ENST00000533818 SMPD4Q9NXE4 827 aa11.34□□□□□ -0.59
CSDE1-215ENST00000533818 CFAP97Q9P2B7 532 aa11.34□□□□□ -0.59
CSDE1-215ENST00000533818 PCDHA12Q9UN75 941 aa11.34□□□□□ -0.59
CSDE1-215ENST00000533818 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.34□□□□□ -0.59
CSDE1-215ENST00000533818 WASH3PC4AMC7 463 aa11.33□□□□□ -0.6
CSDE1-215ENST00000533818 GFRA2O00451 464 aa11.33□□□□□ -0.6
CSDE1-215ENST00000533818 USP12O75317 370 aa11.33□□□□□ -0.6
CSDE1-215ENST00000533818 CKMT2P17540 419 aa11.33□□□□□ -0.6
CSDE1-215ENST00000533818 PFKLP17858 780 aa11.33□□□□□ -0.6
CSDE1-215ENST00000533818 PROZP22891 400 aa11.33□□□□□ -0.6
CSDE1-215ENST00000533818 PAX3P23760 479 aa11.33□□□□□ -0.6
CSDE1-215ENST00000533818 C21orf59P57076 290 aa11.33□□□□□ -0.6
CSDE1-215ENST00000533818 NUCB1Q02818 461 aa11.33□□□□□ -0.6
CSDE1-215ENST00000533818 STARD3Q14849 445 aa11.33□□□□□ -0.6
CSDE1-215ENST00000533818 FUT11Q495W5 492 aa11.33□□□□□ -0.6
CSDE1-215ENST00000533818 NEK8Q86SG6 692 aa11.33□□□□□ -0.6
CSDE1-215ENST00000533818 FAM124AQ86V42 546 aa11.33□□□□□ -0.6
CSDE1-215ENST00000533818 MKRN2Q9H000 416 aaKnown RBP11.33□□□□□ -0.6
CSDE1-215ENST00000533818 PLEKHA5Q9HAU0 1116 aa11.33□□□□□ -0.6
CSDE1-215ENST00000533818 TBC1D14Q9P2M4 693 aa11.33□□□□□ -0.6
CSDE1-215ENST00000533818 CPQQ9Y646 472 aa11.33□□□□□ -0.6
CSDE1-215ENST00000533818 ANK1P16157 1881 aa11.33□□□□□ -0.6
CSDE1-215ENST00000533818 NBASA2RRP1 2371 aa11.33□□□□□ -0.6
CSDE1-215ENST00000533818 ICE1Q9Y2F5 2266 aa11.33□□□□□ -0.6
CSDE1-215ENST00000533818 ABLIM1O14639 778 aa11.32□□□□□ -0.6
CSDE1-215ENST00000533818 HOXC11O43248 304 aaPredicted RBP11.32□□□□□ -0.6
CSDE1-215ENST00000533818 XPOTO43592 962 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms