RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 MIF4GDA9UHW6 222 aaKnown RBP11.51□□□□□ -0.57
CCDC90B-218ENST00000533761 C2CD2LO14523 706 aa11.51□□□□□ -0.57
CCDC90B-218ENST00000533761 CXCL14O95715 111 aa11.51□□□□□ -0.57
CCDC90B-218ENST00000533761 FAM200BP0CF97 657 aa11.51□□□□□ -0.57
CCDC90B-218ENST00000533761 PTPN1P18031 435 aaKnown RBP11.51□□□□□ -0.57
CCDC90B-218ENST00000533761 DNAJB1P25685 340 aa11.51□□□□□ -0.57
CCDC90B-218ENST00000533761 ERVFC1P60507 584 aa11.51□□□□□ -0.57
CCDC90B-218ENST00000533761 CKAP4Q07065 602 aaKnown RBP11.51□□□□□ -0.57
CCDC90B-218ENST00000533761 SMARCB1Q12824 385 aa11.51□□□□□ -0.57
CCDC90B-218ENST00000533761 ORC1Q13415 861 aa11.51□□□□□ -0.57
CCDC90B-218ENST00000533761 RPS6KA1Q15418 735 aa11.51□□□□□ -0.57
CCDC90B-218ENST00000533761 RTP2Q5QGT7 225 aa11.51□□□□□ -0.57
CCDC90B-218ENST00000533761 PPP1R26Q5T8A7 1209 aaPredicted RBP11.51□□□□□ -0.57
CCDC90B-218ENST00000533761 ZNF280DQ6N043 979 aa11.51□□□□□ -0.57
CCDC90B-218ENST00000533761 DCP1BQ8IZD4 617 aaKnown RBP11.51□□□□□ -0.57
CCDC90B-218ENST00000533761 UBL4BQ8N7F7 174 aa11.51□□□□□ -0.57
CCDC90B-218ENST00000533761 MRPL43Q8N983 215 aaKnown RBP11.51□□□□□ -0.57
CCDC90B-218ENST00000533761 MNS1Q8NEH6 495 aa11.51□□□□□ -0.57
CCDC90B-218ENST00000533761 MYCBPAPQ8TBZ2 947 aa11.51□□□□□ -0.57
CCDC90B-218ENST00000533761 GDPD5Q8WTR4 605 aa11.51□□□□□ -0.57
CCDC90B-218ENST00000533761 ATRIPQ8WXE1 791 aa11.51□□□□□ -0.57
CCDC90B-218ENST00000533761 HSFY1Q96LI6 401 aa11.51□□□□□ -0.57
CCDC90B-218ENST00000533761 HNRNPABQ99729 332 aaKnown RBP11.51□□□□□ -0.57
CCDC90B-218ENST00000533761 MED10Q9BTT4 135 aa11.51□□□□□ -0.57
CCDC90B-218ENST00000533761 SELENOOQ9BVL4 669 aa11.51□□□□□ -0.57
CCDC90B-218ENST00000533761 FAM49BQ9NUQ9 324 aa11.51□□□□□ -0.57
CCDC90B-218ENST00000533761 RNF14Q9UBS8 474 aa11.51□□□□□ -0.57
CCDC90B-218ENST00000533761 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.51□□□□□ -0.57
CCDC90B-218ENST00000533761 PLXNA4Q9HCM2 1894 aa11.51□□□□□ -0.57
CCDC90B-218ENST00000533761 TRANK1O15050 2925 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 GRID2IPA4D2P6 1211 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 EPOPA6NHQ4 379 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 RRM1P23921 792 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 CA8P35219 290 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 GPD2P43304 727 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 CAMK1Q14012 370 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 MRPL58Q14197 206 aaKnown RBP11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 ZNF268Q14587 947 aaPredicted RBP11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 GRIN2CQ14957 1233 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 PSMD5Q16401 504 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 NFE2Q16621 373 aaPredicted RBP11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 WHAMMP3Q1A5X7 153 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 CTXN3Q4LDR2 81 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 PAPD7Q5XG87 772 aaKnown RBP11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 PLEKHA7Q6IQ23 1121 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 DENND1BQ6P3S1 775 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 C12orf29Q8N999 325 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 SLC2A14Q8TDB8 520 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 PPP2R3CQ969Q6 453 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 MRPL38Q96DV4 380 aaKnown RBP11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 SMARCD1Q96GM5 515 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 NCAPGQ9BPX3 1015 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 EMILIN2Q9BXX0 1053 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 PRDM12Q9H4Q4 367 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 LMCD1Q9NZU5 365 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 IP6K2Q9UHH9 426 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 ANAPC7Q9UJX3 599 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 HYOU1Q9Y4L1 999 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 BACE2Q9Y5Z0 518 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 OR6C75A6NL08 312 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 RFXAPO00287 272 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 XPO1O14980 1071 aaKnown RBP11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 SART1O43290 800 aaKnown RBP11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 SPOPO43791 374 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 ABL1P00519 1130 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 NPR3P17342 541 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 LMO2P25791 158 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 GABRB2P47870 512 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 PSMC1P62191 440 aaKnown RBP11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 MAMLD1Q13495 774 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 INTS6LQ5JSJ4 861 aaKnown RBP11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 CCDC181Q5TID7 509 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 PRSS55Q6UWB4 352 aaPredicted RBP11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 SLFN11Q7Z7L1 901 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 CEP112Q8N8E3 955 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 LRRC57Q8N9N7 239 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 ARHGEF26Q96DR7 871 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 RPGRIP1Q96KN7 1286 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 ZSWIM1Q9BR11 485 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 TRIM62Q9BVG3 475 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 DUSP16Q9BY84 665 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 DPEP3Q9H4B8 488 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 L2HGDHQ9H9P8 463 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 OSGEPQ9NPF4 335 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 FNIP2Q9P278 1114 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 MTRRQ9UBK8 725 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 SALL4Q9UJQ4 1053 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 CDC23Q9UJX2 597 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 SNX12Q9UMY4 172 aa11.5□□□□□ -0.57
CCDC90B-218ENST00000533761 CCDC66A2RUB6 948 aa11.49□□□□□ -0.57
CCDC90B-218ENST00000533761 C2orf71A6NGG8 1288 aa11.49□□□□□ -0.57
CCDC90B-218ENST00000533761 CES2O00748 559 aa11.49□□□□□ -0.57
CCDC90B-218ENST00000533761 FSCN2O14926 492 aa11.49□□□□□ -0.57
CCDC90B-218ENST00000533761 BUB1BO60566 1050 aaPredicted RBP11.49□□□□□ -0.57
CCDC90B-218ENST00000533761 LILRB3O75022 631 aa11.49□□□□□ -0.57
CCDC90B-218ENST00000533761 CSPG5O95196 566 aa11.49□□□□□ -0.57
CCDC90B-218ENST00000533761 CALCAP01258 141 aa11.49□□□□□ -0.57
CCDC90B-218ENST00000533761 ADH1AP07327 375 aa11.49□□□□□ -0.57
CCDC90B-218ENST00000533761 KRT3P12035 628 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms