RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 GMIPQ9P107 970 aa16.71■□□□□ 0.27
TSKU-204ENST00000533752 APEX2Q9UBZ4 518 aa16.71■□□□□ 0.27
TSKU-204ENST00000533752 TSPAN16Q9UKR8 245 aa16.71■□□□□ 0.27
TSKU-204ENST00000533752 SIT1Q9Y3P8 196 aa16.71■□□□□ 0.27
TSKU-204ENST00000533752 ZNF638Q14966 1978 aaKnown RBP16.71■□□□□ 0.27
TSKU-204ENST00000533752 ANAPC1Q9H1A4 1944 aa16.7■□□□□ 0.26
TSKU-204ENST00000533752 F5P12259 2224 aa16.7■□□□□ 0.26
TSKU-204ENST00000533752 MYH10P35580 1976 aa16.7■□□□□ 0.26
TSKU-204ENST00000533752 KIF26AQ9ULI4 1882 aaPredicted RBP16.7■□□□□ 0.26
TSKU-204ENST00000533752 O00370 1275 aa16.7■□□□□ 0.26
TSKU-204ENST00000533752 XPO1O14980 1071 aaKnown RBP16.7■□□□□ 0.26
TSKU-204ENST00000533752 NCAM2O15394 837 aa16.7■□□□□ 0.26
TSKU-204ENST00000533752 MAGEA9P43362 315 aa16.7■□□□□ 0.26
TSKU-204ENST00000533752 KPNA1P52294 538 aaPredicted RBP16.7■□□□□ 0.26
TSKU-204ENST00000533752 KIF11P52732 1056 aa16.7■□□□□ 0.26
TSKU-204ENST00000533752 ZNF132P52740 706 aa16.7■□□□□ 0.26
TSKU-204ENST00000533752 MYL5Q02045 173 aa16.7■□□□□ 0.26
TSKU-204ENST00000533752 TCP11X2Q5H9J9 407 aa16.7■□□□□ 0.26
TSKU-204ENST00000533752 GPRIN1Q7Z2K8 1008 aa16.7■□□□□ 0.26
TSKU-204ENST00000533752 CCDC186Q7Z3E2 898 aa16.7■□□□□ 0.26
TSKU-204ENST00000533752 TADA2BQ86TJ2 420 aa16.7■□□□□ 0.26
TSKU-204ENST00000533752 SH3RF2Q8TEC5 729 aa16.7■□□□□ 0.26
TSKU-204ENST00000533752 KREMEN1Q96MU8 473 aa16.7■□□□□ 0.26
TSKU-204ENST00000533752 CYP2S1Q96SQ9 504 aa16.7■□□□□ 0.26
TSKU-204ENST00000533752 CDK5RAP1Q96SZ6 601 aaKnown RBP16.7■□□□□ 0.26
TSKU-204ENST00000533752 FAM83CQ9BQN1 747 aa16.7■□□□□ 0.26
TSKU-204ENST00000533752 CRACR2AQ9BSW2 395 aa16.7■□□□□ 0.26
TSKU-204ENST00000533752 NACA2Q9H009 215 aa16.7■□□□□ 0.26
TSKU-204ENST00000533752 NAT10Q9H0A0 1025 aaKnown RBP16.7■□□□□ 0.26
TSKU-204ENST00000533752 IRF2BPLQ9H1B7 796 aa16.7■□□□□ 0.26
TSKU-204ENST00000533752 LTB4R2Q9NPC1 389 aa16.7■□□□□ 0.26
TSKU-204ENST00000533752 UBE2TQ9NPD8 197 aaPredicted RBP16.7■□□□□ 0.26
TSKU-204ENST00000533752 COL4A2P08572 1712 aa16.7■□□□□ 0.26
TSKU-204ENST00000533752 PES1O00541 588 aaKnown RBP16.69■□□□□ 0.26
TSKU-204ENST00000533752 GALR2O43603 387 aaPredicted RBP16.69■□□□□ 0.26
TSKU-204ENST00000533752 MBL2P11226 248 aaPredicted RBP16.69■□□□□ 0.26
TSKU-204ENST00000533752 KRT5P13647 590 aa16.69■□□□□ 0.26
TSKU-204ENST00000533752 AMPD2Q01433 879 aa16.69■□□□□ 0.26
TSKU-204ENST00000533752 UBXN2BQ14CS0 331 aa16.69■□□□□ 0.26
TSKU-204ENST00000533752 ITPRIPL2Q3MIP1 535 aa16.69■□□□□ 0.26
TSKU-204ENST00000533752 IER5LQ5T953 404 aa16.69■□□□□ 0.26
TSKU-204ENST00000533752 LCLAT1Q6UWP7 414 aa16.69■□□□□ 0.26
TSKU-204ENST00000533752 PIGZQ86VD9 579 aa16.69■□□□□ 0.26
TSKU-204ENST00000533752 TTC30AQ86WT1 665 aa16.69■□□□□ 0.26
TSKU-204ENST00000533752 RALGPS2Q86X27 583 aaPredicted RBP16.69■□□□□ 0.26
TSKU-204ENST00000533752 CCDC105Q8IYK2 499 aa16.69■□□□□ 0.26
TSKU-204ENST00000533752 ARHGAP18Q8N392 663 aa16.69■□□□□ 0.26
TSKU-204ENST00000533752 ANKRD20A12PQ8NF67 263 aa16.69■□□□□ 0.26
TSKU-204ENST00000533752 OSCP1Q8WVF1 389 aa16.69■□□□□ 0.26
TSKU-204ENST00000533752 ATP2A3Q93084 1043 aa16.69■□□□□ 0.26
TSKU-204ENST00000533752 ZFYVE19Q96K21 471 aa16.69■□□□□ 0.26
TSKU-204ENST00000533752 FOXQ1Q9C009 403 aa16.69■□□□□ 0.26
TSKU-204ENST00000533752 CYLDQ9NQC7 956 aa16.69■□□□□ 0.26
TSKU-204ENST00000533752 GKN1Q9NS71 199 aa16.69■□□□□ 0.26
TSKU-204ENST00000533752 SAMSN1Q9NSI8 373 aaKnown RBP16.69■□□□□ 0.26
TSKU-204ENST00000533752 TMEM63CQ9P1W3 806 aa16.69■□□□□ 0.26
TSKU-204ENST00000533752 CHORDC1Q9UHD1 332 aaPredicted RBP16.69■□□□□ 0.26
TSKU-204ENST00000533752 CNTN6Q9UQ52 1028 aa16.69■□□□□ 0.26
TSKU-204ENST00000533752 CPQQ9Y646 472 aa16.69■□□□□ 0.26
TSKU-204ENST00000533752 CACNA1HO95180 2353 aa16.69■□□□□ 0.26
TSKU-204ENST00000533752 TICRRQ7Z2Z1 1910 aa16.68■□□□□ 0.26
TSKU-204ENST00000533752 LEFTY2O00292 366 aa16.68■□□□□ 0.26
TSKU-204ENST00000533752 SLC9A3R1O14745 358 aaPredicted RBP16.68■□□□□ 0.26
TSKU-204ENST00000533752 CYP26A1O43174 497 aa16.68■□□□□ 0.26
TSKU-204ENST00000533752 COCHO43405 550 aa16.68■□□□□ 0.26
TSKU-204ENST00000533752 TLR5O60602 858 aa16.68■□□□□ 0.26
TSKU-204ENST00000533752 PON1P27169 355 aa16.68■□□□□ 0.26
TSKU-204ENST00000533752 PLA2G4AP47712 749 aa16.68■□□□□ 0.26
TSKU-204ENST00000533752 IFNAR2P48551 515 aa16.68■□□□□ 0.26
TSKU-204ENST00000533752 PTPN5P54829 565 aa16.68■□□□□ 0.26
TSKU-204ENST00000533752 TYRO3Q06418 890 aa16.68■□□□□ 0.26
TSKU-204ENST00000533752 CNGA2Q16280 664 aa16.68■□□□□ 0.26
TSKU-204ENST00000533752 MEA1Q16626 185 aa16.68■□□□□ 0.26
TSKU-204ENST00000533752 HSP90AA4PQ58FG1 418 aa16.68■□□□□ 0.26
TSKU-204ENST00000533752 MIIPQ5JXC2 388 aa16.68■□□□□ 0.26
TSKU-204ENST00000533752 CDKAL1Q5VV42 579 aa16.68■□□□□ 0.26
TSKU-204ENST00000533752 CAVIN1Q6NZI2 390 aaKnown RBP16.68■□□□□ 0.26
TSKU-204ENST00000533752 C11orf57Q6ZUT1 292 aaPredicted RBP16.68■□□□□ 0.26
TSKU-204ENST00000533752 CPA6Q8N4T0 437 aa16.68■□□□□ 0.26
TSKU-204ENST00000533752 FAM3CQ92520 227 aa16.68■□□□□ 0.26
TSKU-204ENST00000533752 EXOC4Q96A65 974 aa16.68■□□□□ 0.26
TSKU-204ENST00000533752 DUS2Q9NX74 493 aaKnown RBP16.68■□□□□ 0.26
TSKU-204ENST00000533752 GTSE1Q9NYZ3 720 aa16.68■□□□□ 0.26
TSKU-204ENST00000533752 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.68■□□□□ 0.26
TSKU-204ENST00000533752 USP3Q9Y6I4 520 aa16.68■□□□□ 0.26
TSKU-204ENST00000533752 HELZP42694 1942 aaKnown RBP16.67■□□□□ 0.26
TSKU-204ENST00000533752 FAM170BA6NMN3 283 aa16.67■□□□□ 0.26
TSKU-204ENST00000533752 SPECC1L-ADORA2AF8WAN1 911 aa16.67■□□□□ 0.26
TSKU-204ENST00000533752 M0QYV0 167 aa16.67■□□□□ 0.26
TSKU-204ENST00000533752 MED7O43513 233 aa16.67■□□□□ 0.26
TSKU-204ENST00000533752 PI15O43692 258 aa16.67■□□□□ 0.26
TSKU-204ENST00000533752 RALAP11233 206 aa16.67■□□□□ 0.26
TSKU-204ENST00000533752 SLC9A1P19634 815 aa16.67■□□□□ 0.26
TSKU-204ENST00000533752 TARSP26639 723 aaKnown RBP16.67■□□□□ 0.26
TSKU-204ENST00000533752 CTHP32929 405 aa16.67■□□□□ 0.26
TSKU-204ENST00000533752 PDE4CQ08493 712 aa16.67■□□□□ 0.26
TSKU-204ENST00000533752 GOLGA8FQ08AF8 430 aa16.67■□□□□ 0.26
TSKU-204ENST00000533752 GOLGA8DPQ0D2H9 430 aa16.67■□□□□ 0.26
TSKU-204ENST00000533752 RUNX3Q13761 415 aa16.67■□□□□ 0.26
TSKU-204ENST00000533752 KLHL40Q2TBA0 621 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms