RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 TYROBPO43914 113 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 MGRN1O60291 552 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 DCTN3O75935 186 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 VTNP04004 478 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 MMP3P08254 477 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 FAM163BP0C2L3 166 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 CA4P22748 312 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 PNPLA4P41247 253 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 MAGEA6P43360 314 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 NR2C2P49116 596 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 MNAT1P51948 309 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 BNIP1Q12981 228 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 SETDB1Q15047 1291 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 SEPT7Q16181 437 aaKnown RBP12.48□□□□□ -0.41
ATM-222ENST00000533733 GOLGA7BQ2TAP0 167 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 HHATQ5VTY9 493 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 SLC9A4Q6AI14 798 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 C3orf62Q6ZUJ4 267 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 PRUNE1Q86TP1 453 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 UNC45BQ8IWX7 931 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 GDAP1Q8TB36 358 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 FAF2Q96CS3 445 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 SNX27Q96L92 541 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 ZNF560Q96MR9 790 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 KLC2Q9H0B6 622 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 SPON1Q9HCB6 807 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.48□□□□□ -0.41
ATM-222ENST00000533733 TJP2Q9UDY2 1190 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 HMGXB4Q9UGU5 601 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 UBQLN1Q9UMX0 589 aaKnown RBP12.48□□□□□ -0.41
ATM-222ENST00000533733 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.48□□□□□ -0.41
ATM-222ENST00000533733 IKBKGQ9Y6K9 419 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 USH1CQ9Y6N9 552 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 SMIM35A0A1B0GVV1 85 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 E5RJQ4 531 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 ALADP13716 330 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 GDF10P55107 478 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 WDR4P57081 412 aaKnown RBP12.48□□□□□ -0.41
ATM-222ENST00000533733 GPX6P59796 221 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 PPARDQ03181 441 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 KCNJ11Q14654 390 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 FASTKD3Q14CZ7 662 aaKnown RBP12.48□□□□□ -0.41
ATM-222ENST00000533733 ZBTB6Q15916 424 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 PKN2Q16513 984 aaKnown RBP12.48□□□□□ -0.41
ATM-222ENST00000533733 LGSNQ5TDP6 509 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 MAP1SQ66K74 1059 aaPredicted RBP12.48□□□□□ -0.41
ATM-222ENST00000533733 OLFML1Q6UWY5 402 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 BZW1Q7L1Q6 419 aaKnown RBP12.48□□□□□ -0.41
ATM-222ENST00000533733 CDKL3Q8IVW4 592 aaPredicted RBP12.48□□□□□ -0.41
ATM-222ENST00000533733 MCUQ8NE86 351 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 FBXO36Q8NEA4 188 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 ZNF668Q96K58 619 aaPredicted RBP12.48□□□□□ -0.41
ATM-222ENST00000533733 PAFAH2Q99487 392 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 VPS11Q9H270 941 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 TXLNGQ9NUQ3 528 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 CNTN3Q9P232 1028 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 NRCAMQ92823 1304 aa12.48□□□□□ -0.41
ATM-222ENST00000533733 IQCA1LA6NCM1 817 aa12.47□□□□□ -0.41
ATM-222ENST00000533733 TRDMT1O14717 391 aaKnown RBP12.47□□□□□ -0.41
ATM-222ENST00000533733 HNRNPCL1O60812 293 aaKnown RBP12.47□□□□□ -0.41
ATM-222ENST00000533733 CD48P09326 243 aa12.47□□□□□ -0.41
ATM-222ENST00000533733 RPL34P49207 117 aaKnown RBP12.47□□□□□ -0.41
ATM-222ENST00000533733 BCAT1P54687 386 aa12.47□□□□□ -0.41
ATM-222ENST00000533733 BCAR1P56945 870 aa12.47□□□□□ -0.41
ATM-222ENST00000533733 FKBP1BP68106 108 aa12.47□□□□□ -0.41
ATM-222ENST00000533733 BASP1P80723 227 aaKnown RBP12.47□□□□□ -0.41
ATM-222ENST00000533733 GRB14Q14449 540 aa12.47□□□□□ -0.41
ATM-222ENST00000533733 FYB2Q5VWT5 728 aa12.47□□□□□ -0.41
ATM-222ENST00000533733 DLK2Q6UY11 383 aa12.47□□□□□ -0.41
ATM-222ENST00000533733 CYP4V2Q6ZWL3 525 aaPredicted RBP12.47□□□□□ -0.41
ATM-222ENST00000533733 PNMA8AQ86V59 439 aaPredicted RBP12.47□□□□□ -0.41
ATM-222ENST00000533733 PSTKQ8IV42 348 aaKnown RBP12.47□□□□□ -0.41
ATM-222ENST00000533733 FAM71DQ8N9W8 422 aa12.47□□□□□ -0.41
ATM-222ENST00000533733 OR6J1Q8NGC5 347 aa12.47□□□□□ -0.41
ATM-222ENST00000533733 UBA3Q8TBC4 463 aa12.47□□□□□ -0.41
ATM-222ENST00000533733 SLC35F5Q8WV83 523 aa12.47□□□□□ -0.41
ATM-222ENST00000533733 HSFY1Q96LI6 401 aa12.47□□□□□ -0.41
ATM-222ENST00000533733 RCOR3Q9P2K3 495 aaPredicted RBP12.47□□□□□ -0.41
ATM-222ENST00000533733 GTF2IRD1Q9UHL9 959 aa12.47□□□□□ -0.41
ATM-222ENST00000533733 ZNF180Q9UJW8 692 aa12.47□□□□□ -0.41
ATM-222ENST00000533733 H7C0C1 242 aa12.46□□□□□ -0.41
ATM-222ENST00000533733 PDHXO00330 501 aa12.46□□□□□ -0.41
ATM-222ENST00000533733 EDF1O60869 148 aaKnown RBP12.46□□□□□ -0.41
ATM-222ENST00000533733 UBOX5O94941 541 aa12.46□□□□□ -0.41
ATM-222ENST00000533733 SNAI1O95863 264 aaPredicted RBP12.46□□□□□ -0.41
ATM-222ENST00000533733 ZBED1O96006 694 aa12.46□□□□□ -0.41
ATM-222ENST00000533733 PFKMP08237 780 aa12.46□□□□□ -0.41
ATM-222ENST00000533733 ZNF286BP0CG31 522 aa12.46□□□□□ -0.41
ATM-222ENST00000533733 CCNB1P14635 433 aa12.46□□□□□ -0.41
ATM-222ENST00000533733 CYP3A5P20815 502 aa12.46□□□□□ -0.41
ATM-222ENST00000533733 ADCYAP1R1P41586 468 aa12.46□□□□□ -0.41
ATM-222ENST00000533733 ATP5OP48047 213 aa12.46□□□□□ -0.41
ATM-222ENST00000533733 BST2Q10589 180 aaKnown RBP12.46□□□□□ -0.41
ATM-222ENST00000533733 DPYSL2Q16555 572 aa12.46□□□□□ -0.41
ATM-222ENST00000533733 SPRED3Q2MJR0 410 aa12.46□□□□□ -0.41
ATM-222ENST00000533733 BBS9Q3SYG4 887 aa12.46□□□□□ -0.41
ATM-222ENST00000533733 CCDC14Q49A88 953 aa12.46□□□□□ -0.41
ATM-222ENST00000533733 FNBP1LQ5T0N5 605 aa12.46□□□□□ -0.41
ATM-222ENST00000533733 MARCH8Q5T0T0 291 aa12.46□□□□□ -0.41
ATM-222ENST00000533733 ANKRD22Q5VYY1 191 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms