RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 ZNF788Q6ZQV5 615 aa3.28□□□□□ -1.88
ATM-220ENST00000533526 BEND5Q7L4P6 421 aa3.28□□□□□ -1.88
ATM-220ENST00000533526 KRT28Q7Z3Y7 464 aa3.28□□□□□ -1.88
ATM-220ENST00000533526 AMIGO2Q86SJ2 522 aa3.28□□□□□ -1.88
ATM-220ENST00000533526 DPP9Q86TI2 863 aa3.28□□□□□ -1.88
ATM-220ENST00000533526 ATP11CQ8NB49 1132 aa3.28□□□□□ -1.88
ATM-220ENST00000533526 SEMA6DQ8NFY4 1073 aa3.28□□□□□ -1.88
ATM-220ENST00000533526 IQCDQ96DY2 449 aa3.28□□□□□ -1.88
ATM-220ENST00000533526 DAZAP1Q96EP5 407 aaKnown RBP3.28□□□□□ -1.88
ATM-220ENST00000533526 ZDHHC12Q96GR4 267 aa3.28□□□□□ -1.88
ATM-220ENST00000533526 FAM227BQ96M60 508 aa3.28□□□□□ -1.88
ATM-220ENST00000533526 COLEC11Q9BWP8 271 aa3.28□□□□□ -1.88
ATM-220ENST00000533526 APOL5Q9BWW9 433 aa3.28□□□□□ -1.88
ATM-220ENST00000533526 EIF2AQ9BY44 585 aaKnown RBP3.28□□□□□ -1.88
ATM-220ENST00000533526 NKX1-2Q9UD57 310 aaPredicted RBP3.28□□□□□ -1.88
ATM-220ENST00000533526 ADAM21Q9UKJ8 722 aa3.28□□□□□ -1.88
ATM-220ENST00000533526 FAM50BQ9Y247 325 aa3.28□□□□□ -1.88
ATM-220ENST00000533526 CLCA1A8K7I4 914 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 H7C1Q1 480 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 CES2O00748 559 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 ZNF213O14771 459 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 ERBB2P04626 1255 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 PRKCGP05129 697 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 MYL1P05976 194 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 NBPF7P0C2Y1 421 aaPredicted RBP3.27□□□□□ -1.89
ATM-220ENST00000533526 CTGFP29279 349 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 CASP5P51878 434 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 PGDP52209 483 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 ITGA8P53708 1063 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 C21orf58P58505 322 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 HTRA4P83105 476 aaPredicted RBP3.27□□□□□ -1.89
ATM-220ENST00000533526 TIAL1Q01085 375 aaKnown RBP eCLIP3.27□□□□□ -1.89
ATM-220ENST00000533526 ZNF543Q08ER8 600 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 SLC10A2Q12908 348 aaPredicted RBP3.27□□□□□ -1.89
ATM-220ENST00000533526 L1TD1Q5T7N2 865 aaKnown RBP3.27□□□□□ -1.89
ATM-220ENST00000533526 USP17L6PQ6QN14 398 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 TRIM72Q6ZMU5 477 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 CATSPERGQ6ZRH7 1159 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 KCTD20Q7Z5Y7 419 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 SFTPA1Q8IWL2 248 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 VGLL2Q8N8G2 317 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 TERB1Q8NA31 727 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 CCDC150Q8NCX0 1101 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 BRI3BPQ8WY22 251 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 SNX18Q96RF0 628 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 THAP7Q9BT49 309 aaPredicted RBP3.27□□□□□ -1.89
ATM-220ENST00000533526 ZBTB26Q9HCK0 441 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 HEYLQ9NQ87 328 aaPredicted RBP3.27□□□□□ -1.89
ATM-220ENST00000533526 STARD7Q9NQZ5 370 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 ADARB2Q9NS39 739 aaKnown RBP3.27□□□□□ -1.89
ATM-220ENST00000533526 TBC1D23Q9NUY8 699 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 SH3BP4Q9P0V3 963 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 MGAT4CQ9UBM8 478 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 DNAJB11Q9UBS4 358 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 STEAP1Q9UHE8 339 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 CORO2BQ9UQ03 480 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 TBC1D30Q9Y2I9 924 aa3.27□□□□□ -1.89
ATM-220ENST00000533526 POM121BA6NF01 834 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 F8W8V4 182 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 UBE2Q2LH0YL09 131 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 AP4M1O00189 453 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 PMM2O15305 246 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 TMPRSS11DO60235 418 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 COQ9O75208 318 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 RBMXL2O75526 392 aaKnown RBP3.26□□□□□ -1.89
ATM-220ENST00000533526 FGAP02671 866 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 SLC5A1P13866 664 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 IDEP14735 1019 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 STT3AP46977 705 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 TUBA4AP68366 448 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 MRPS21P82921 87 aaKnown RBP3.26□□□□□ -1.89
ATM-220ENST00000533526 E2F1Q01094 437 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 STK3Q13188 491 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 GRM1Q13255 1194 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 PICALMQ13492 652 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 CLCA4Q14CN2 919 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 CYP1B1Q16678 543 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 ST3GAL2Q16842 350 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 KSR2Q6VAB6 950 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 PTCHD4Q6ZW05 846 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 KRT73Q86Y46 540 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 ADAMTS18Q8TE60 1221 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 NTN5Q8WTR8 489 aaPredicted RBP3.26□□□□□ -1.89
ATM-220ENST00000533526 CTHRC1Q96CG8 243 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 REPS1Q96D71 796 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 VPS50Q96JG6 964 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 ZBTB45Q96K62 511 aaPredicted RBP3.26□□□□□ -1.89
ATM-220ENST00000533526 LENG8Q96PV6 779 aaPredicted RBP3.26□□□□□ -1.89
ATM-220ENST00000533526 FYTTD1Q96QD9 318 aaKnown RBP3.26□□□□□ -1.89
ATM-220ENST00000533526 HIST1H2AAQ96QV6 131 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 PRR25Q96S07 402 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 TBCBQ99426 244 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 NAA15Q9BXJ9 866 aaKnown RBP3.26□□□□□ -1.89
ATM-220ENST00000533526 SEMA4CQ9C0C4 833 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 SNX15Q9NRS6 342 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 TMOD4Q9NZQ9 345 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 MYO1AQ9UBC5 1043 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 HPSEQ9Y251 543 aa3.26□□□□□ -1.89
ATM-220ENST00000533526 POLR2AP24928 1970 aaKnown RBP3.25□□□□□ -1.89
ATM-220ENST00000533526 LINC01548A6NM66 108 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms