RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 SLC9A1P19634 815 aa12.11□□□□□ -0.47
UBASH3B-208ENST00000533451 CDK11BP21127 795 aaKnown RBP12.11□□□□□ -0.47
UBASH3B-208ENST00000533451 EEF1GP26641 437 aaKnown RBP12.11□□□□□ -0.47
UBASH3B-208ENST00000533451 PPP3CCP48454 512 aa12.11□□□□□ -0.47
UBASH3B-208ENST00000533451 VCPP55072 806 aaKnown RBP12.11□□□□□ -0.47
UBASH3B-208ENST00000533451 MFAP3P55082 362 aa12.11□□□□□ -0.47
UBASH3B-208ENST00000533451 APBA1Q02410 837 aa12.11□□□□□ -0.47
UBASH3B-208ENST00000533451 GCNT1Q02742 428 aa12.11□□□□□ -0.47
UBASH3B-208ENST00000533451 TYRO3Q06418 890 aa12.11□□□□□ -0.47
UBASH3B-208ENST00000533451 MMRN1Q13201 1228 aa12.11□□□□□ -0.47
UBASH3B-208ENST00000533451 UBXN2BQ14CS0 331 aa12.11□□□□□ -0.47
UBASH3B-208ENST00000533451 SLC44A4Q53GD3 710 aa12.11□□□□□ -0.47
UBASH3B-208ENST00000533451 GJB7Q6PEY0 223 aa12.11□□□□□ -0.47
UBASH3B-208ENST00000533451 GPRIN1Q7Z2K8 1008 aa12.11□□□□□ -0.47
UBASH3B-208ENST00000533451 ZMIZ2Q8NF64 920 aa12.11□□□□□ -0.47
UBASH3B-208ENST00000533451 LMO3Q8TAP4 145 aa12.11□□□□□ -0.47
UBASH3B-208ENST00000533451 USP13Q92995 863 aaPredicted RBP12.11□□□□□ -0.47
UBASH3B-208ENST00000533451 SLC22A12Q96S37 553 aa12.11□□□□□ -0.47
UBASH3B-208ENST00000533451 TTLL2Q9BWV7 592 aa12.11□□□□□ -0.47
UBASH3B-208ENST00000533451 DUSP16Q9BY84 665 aa12.11□□□□□ -0.47
UBASH3B-208ENST00000533451 NDST4Q9H3R1 872 aa12.11□□□□□ -0.47
UBASH3B-208ENST00000533451 FAM124BQ9H5Z6 455 aaPredicted RBP12.11□□□□□ -0.47
UBASH3B-208ENST00000533451 KIF9Q9HAQ2 790 aa12.11□□□□□ -0.47
UBASH3B-208ENST00000533451 CHORDC1Q9UHD1 332 aaPredicted RBP12.11□□□□□ -0.47
UBASH3B-208ENST00000533451 RAPGEFL1Q9UHV5 662 aa12.11□□□□□ -0.47
UBASH3B-208ENST00000533451 NCANO14594 1321 aa12.11□□□□□ -0.47
UBASH3B-208ENST00000533451 KMT2EQ8IZD2 1858 aa12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 COL4A3Q01955 1670 aa12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 M0QYV0 167 aa12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 SCAMP3O14828 347 aaKnown RBP12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 CALCAP01258 141 aa12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 VDRP11473 427 aa12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 PTMSP20962 102 aa12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 CD72P21854 359 aa12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 BRD2P25440 801 aaKnown RBP12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 MYL5Q02045 173 aa12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 ANO6Q4KMQ2 910 aa12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 VWA3BQ502W6 1294 aa12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 ARHGAP29Q52LW3 1261 aa12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 TCP11X2Q5H9J9 407 aa12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 HECTD3Q5T447 861 aa12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 PHLDB3Q6NSJ2 640 aa12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 BMP8AQ7Z5Y6 402 aa12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 AOPEPQ8N6M6 819 aa12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 UBA3Q8TBC4 463 aa12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 ENOX1Q8TC92 643 aaKnown RBP12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 SH3RF2Q8TEC5 729 aa12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 DNASE1L2Q92874 299 aa12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 FOXQ1Q9C009 403 aa12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 CSNK1G1Q9HCP0 422 aa12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 TLR8Q9NR97 1041 aaKnown RBP12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 FANCLQ9NW38 375 aa12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 WDR70Q9NW82 654 aa12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 OBP2AQ9NY56 170 aa12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 NAGPAQ9UK23 515 aa12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 TSPAN16Q9UKR8 245 aa12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 NDRG2Q9UN36 371 aaKnown RBP12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 PIAS3Q9Y6X2 628 aa12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 ZNF318Q5VUA4 2279 aa12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 F5P12259 2224 aa12.1□□□□□ -0.47
UBASH3B-208ENST00000533451 SOBPA7XYQ1 873 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 TNFRSF10BO14763 440 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 CHADO15335 359 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 PAEPP09466 180 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 IRF1P10914 325 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 IFNAR2P48551 515 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 BCAT1P54687 386 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 PRKCQQ04759 706 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 BST2Q10589 180 aaKnown RBP12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 RAPGEF1Q13905 1077 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 MTF1Q14872 753 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 FKBP15Q5T1M5 1219 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 ARHGAP17Q68EM7 881 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 PIGZQ86VD9 579 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 SIX6OS1Q8N1H7 587 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 UBR7Q8N806 425 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 ANKRD52Q8NB46 1076 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 OVCA2Q8WZ82 227 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 PCMTD1Q96MG8 357 aaPredicted RBP12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 KREMEN1Q96MU8 473 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 LSM14BQ9BX40 385 aaKnown RBP12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 VPS16Q9H269 839 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 EBF3Q9H4W6 596 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 CCSER2Q9H7U1 834 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 LRRC4Q9HBW1 653 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 GKN1Q9NS71 199 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 COMMD8Q9NX08 183 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 GTSE1Q9NYZ3 720 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 CFAP97Q9P2B7 532 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 APEX2Q9UBZ4 518 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 KIAA1257Q9ULG3 409 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 CPQQ9Y646 472 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 WNT6Q9Y6F9 365 aa12.09□□□□□ -0.47
UBASH3B-208ENST00000533451 A0A1W2PQH9 124 aa12.08□□□□□ -0.48
UBASH3B-208ENST00000533451 KANSL1LA0AUZ9 987 aa12.08□□□□□ -0.48
UBASH3B-208ENST00000533451 SYCE3A1L190 88 aa12.08□□□□□ -0.48
UBASH3B-208ENST00000533451 GTPBP10A4D1E9 387 aaKnown RBP12.08□□□□□ -0.48
UBASH3B-208ENST00000533451 O00370 1275 aa12.08□□□□□ -0.48
UBASH3B-208ENST00000533451 THAP12O43422 761 aa12.08□□□□□ -0.48
UBASH3B-208ENST00000533451 LETM1O95202 739 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms