RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 ENPEPQ07075 957 aa12□□□□□ -0.49
CLCF1-202ENST00000533438 NR1H3Q13133 447 aa12□□□□□ -0.49
CLCF1-202ENST00000533438 SNX30Q5VWJ9 437 aa12□□□□□ -0.49
CLCF1-202ENST00000533438 HEATR6Q6AI08 1181 aaKnown RBP12□□□□□ -0.49
CLCF1-202ENST00000533438 PRR23BQ6ZRT6 265 aa12□□□□□ -0.49
CLCF1-202ENST00000533438 ACOT1Q86TX2 421 aa12□□□□□ -0.49
CLCF1-202ENST00000533438 ADGRG2Q8IZP9 1017 aa12□□□□□ -0.49
CLCF1-202ENST00000533438 FUKQ8N0W3 1084 aa12□□□□□ -0.49
CLCF1-202ENST00000533438 CRYBG2Q8N1P7 616 aa12□□□□□ -0.49
CLCF1-202ENST00000533438 GUF1Q8N442 669 aaKnown RBP12□□□□□ -0.49
CLCF1-202ENST00000533438 PDZD8Q8NEN9 1154 aa12□□□□□ -0.49
CLCF1-202ENST00000533438 ZMIZ2Q8NF64 920 aa12□□□□□ -0.49
CLCF1-202ENST00000533438 EXOC4Q96A65 974 aa12□□□□□ -0.49
CLCF1-202ENST00000533438 SMARCD1Q96GM5 515 aa12□□□□□ -0.49
CLCF1-202ENST00000533438 DMAP1Q9NPF5 467 aaPredicted RBP12□□□□□ -0.49
CLCF1-202ENST00000533438 HMGXB4Q9UGU5 601 aa12□□□□□ -0.49
CLCF1-202ENST00000533438 CPQQ9Y646 472 aa12□□□□□ -0.49
CLCF1-202ENST00000533438 ATP8B3O60423 1300 aa12□□□□□ -0.49
CLCF1-202ENST00000533438 CACNA1BQ00975 2339 aa12□□□□□ -0.49
CLCF1-202ENST00000533438 TPRP12270 2363 aaKnown RBP11.99□□□□□ -0.49
CLCF1-202ENST00000533438 SLC30A4O14863 429 aa11.99□□□□□ -0.49
CLCF1-202ENST00000533438 BEST1O76090 585 aa11.99□□□□□ -0.49
CLCF1-202ENST00000533438 HLA-DRAP01903 254 aa11.99□□□□□ -0.49
CLCF1-202ENST00000533438 RETP07949 1114 aa11.99□□□□□ -0.49
CLCF1-202ENST00000533438 ZDHHC11BP0C7U3 371 aa11.99□□□□□ -0.49
CLCF1-202ENST00000533438 P4HA1P13674 534 aa11.99□□□□□ -0.49
CLCF1-202ENST00000533438 NDST1P52848 882 aa11.99□□□□□ -0.49
CLCF1-202ENST00000533438 SPEM2Q0P670 501 aa11.99□□□□□ -0.49
CLCF1-202ENST00000533438 IFRD2Q12894 506 aaPredicted RBP11.99□□□□□ -0.49
CLCF1-202ENST00000533438 ZCWPW2Q504Y3 356 aa11.99□□□□□ -0.49
CLCF1-202ENST00000533438 SPOPLQ6IQ16 392 aa11.99□□□□□ -0.49
CLCF1-202ENST00000533438 INTS8Q75QN2 995 aaKnown RBP11.99□□□□□ -0.49
CLCF1-202ENST00000533438 UNC93AQ86WB7 457 aa11.99□□□□□ -0.49
CLCF1-202ENST00000533438 CAMKK1Q8N5S9 505 aa11.99□□□□□ -0.49
CLCF1-202ENST00000533438 RPLP0P6Q8NHW5 317 aa11.99□□□□□ -0.49
CLCF1-202ENST00000533438 SCAMP5Q8TAC9 235 aa11.99□□□□□ -0.49
CLCF1-202ENST00000533438 FBXO32Q969P5 355 aa11.99□□□□□ -0.49
CLCF1-202ENST00000533438 CCDC47Q96A33 483 aaKnown RBP11.99□□□□□ -0.49
CLCF1-202ENST00000533438 ZFRQ96KR1 1074 aaKnown RBP11.99□□□□□ -0.49
CLCF1-202ENST00000533438 SMOQ99835 787 aa11.99□□□□□ -0.49
CLCF1-202ENST00000533438 MED10Q9BTT4 135 aa11.99□□□□□ -0.49
CLCF1-202ENST00000533438 CLSTN2Q9H4D0 955 aa11.99□□□□□ -0.49
CLCF1-202ENST00000533438 CSNK1G1Q9HCP0 422 aa11.99□□□□□ -0.49
CLCF1-202ENST00000533438 POLR3BQ9NW08 1133 aaPredicted RBP11.99□□□□□ -0.49
CLCF1-202ENST00000533438 COMMD8Q9NX08 183 aa11.99□□□□□ -0.49
CLCF1-202ENST00000533438 USP18Q9UMW8 372 aa11.99□□□□□ -0.49
CLCF1-202ENST00000533438 MAPK8IP1Q9UQF2 711 aa11.99□□□□□ -0.49
CLCF1-202ENST00000533438 COCHO43405 550 aa11.98□□□□□ -0.49
CLCF1-202ENST00000533438 FOXD2O60548 495 aaPredicted RBP11.98□□□□□ -0.49
CLCF1-202ENST00000533438 AP1G2O75843 785 aa11.98□□□□□ -0.49
CLCF1-202ENST00000533438 CLSTN1O94985 981 aa11.98□□□□□ -0.49
CLCF1-202ENST00000533438 ABL1P00519 1130 aa11.98□□□□□ -0.49
CLCF1-202ENST00000533438 CYP17A1P05093 508 aa11.98□□□□□ -0.49
CLCF1-202ENST00000533438 TRIM49P0CI25 452 aa11.98□□□□□ -0.49
CLCF1-202ENST00000533438 TRIM49CP0CI26 452 aa11.98□□□□□ -0.49
CLCF1-202ENST00000533438 MBL2P11226 248 aaPredicted RBP11.98□□□□□ -0.49
CLCF1-202ENST00000533438 CCDC130P13994 396 aa11.98□□□□□ -0.49
CLCF1-202ENST00000533438 PIK3CAP42336 1068 aa11.98□□□□□ -0.49
CLCF1-202ENST00000533438 PXNP49023 591 aaPredicted RBP11.98□□□□□ -0.49
CLCF1-202ENST00000533438 TUBP50607 506 aa11.98□□□□□ -0.49
CLCF1-202ENST00000533438 PPP3CAQ08209 521 aa11.98□□□□□ -0.49
CLCF1-202ENST00000533438 INCA1Q0VD86 236 aa11.98□□□□□ -0.49
CLCF1-202ENST00000533438 ORC1Q13415 861 aa11.98□□□□□ -0.49
CLCF1-202ENST00000533438 CCDC183Q5T5S1 534 aa11.98□□□□□ -0.49
CLCF1-202ENST00000533438 CAVIN1Q6NZI2 390 aaKnown RBP11.98□□□□□ -0.49
CLCF1-202ENST00000533438 SYT13Q7L8C5 426 aa11.98□□□□□ -0.49
CLCF1-202ENST00000533438 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.98□□□□□ -0.49
CLCF1-202ENST00000533438 FILIP1Q7Z7B0 1213 aa11.98□□□□□ -0.49
CLCF1-202ENST00000533438 DDX42Q86XP3 938 aaKnown RBP eCLIP11.98□□□□□ -0.49
CLCF1-202ENST00000533438 FAM186BQ8IYM0 893 aa11.98□□□□□ -0.49
CLCF1-202ENST00000533438 FAM160A2Q8N612 972 aaPredicted RBP11.98□□□□□ -0.49
CLCF1-202ENST00000533438 SLC2A14Q8TDB8 520 aa11.98□□□□□ -0.49
CLCF1-202ENST00000533438 GAB3Q8WWW8 586 aa11.98□□□□□ -0.49
CLCF1-202ENST00000533438 CCDC34Q96HJ3 373 aa11.98□□□□□ -0.49
CLCF1-202ENST00000533438 TWNKQ96RR1 684 aa11.98□□□□□ -0.49
CLCF1-202ENST00000533438 DUSP9Q99956 384 aaKnown RBP11.98□□□□□ -0.49
CLCF1-202ENST00000533438 NUP62CLQ9H1M0 184 aa11.98□□□□□ -0.49
CLCF1-202ENST00000533438 APOBEC3GQ9HC16 384 aaKnown RBP11.98□□□□□ -0.49
CLCF1-202ENST00000533438 KRT82Q9NSB4 513 aa11.98□□□□□ -0.49
CLCF1-202ENST00000533438 SMPD4Q9NXE4 827 aa11.98□□□□□ -0.49
CLCF1-202ENST00000533438 TMEM63CQ9P1W3 806 aa11.98□□□□□ -0.49
CLCF1-202ENST00000533438 CHORDC1Q9UHD1 332 aaPredicted RBP11.98□□□□□ -0.49
CLCF1-202ENST00000533438 CDV3Q9UKY7 258 aaKnown RBP11.98□□□□□ -0.49
CLCF1-202ENST00000533438 SLC8A2Q9UPR5 921 aa11.98□□□□□ -0.49
CLCF1-202ENST00000533438 CHD8Q9HCK8 2581 aa11.97□□□□□ -0.49
CLCF1-202ENST00000533438 DCDC2BA2VCK2 349 aa11.97□□□□□ -0.49
CLCF1-202ENST00000533438 K7EQS6 105 aa11.97□□□□□ -0.49
CLCF1-202ENST00000533438 SLC9A3R1O14745 358 aaPredicted RBP11.97□□□□□ -0.49
CLCF1-202ENST00000533438 TM4SF5O14894 197 aa11.97□□□□□ -0.49
CLCF1-202ENST00000533438 RPL13P26373 211 aaKnown RBP11.97□□□□□ -0.49
CLCF1-202ENST00000533438 PSMC2P35998 433 aaKnown RBP11.97□□□□□ -0.49
CLCF1-202ENST00000533438 EIF2DP41214 584 aaKnown RBP11.97□□□□□ -0.49
CLCF1-202ENST00000533438 GCLMP48507 274 aa11.97□□□□□ -0.49
CLCF1-202ENST00000533438 ADAM9Q13443 819 aa11.97□□□□□ -0.49
CLCF1-202ENST00000533438 DHCR24Q15392 516 aa11.97□□□□□ -0.49
CLCF1-202ENST00000533438 EDRF1Q3B7T1 1238 aa11.97□□□□□ -0.49
CLCF1-202ENST00000533438 RHBDF2Q6PJF5 856 aa11.97□□□□□ -0.49
CLCF1-202ENST00000533438 CEP68Q76N32 757 aa11.97□□□□□ -0.49
CLCF1-202ENST00000533438 C12orf29Q8N999 325 aa11.97□□□□□ -0.49
CLCF1-202ENST00000533438 NETO1Q8TDF5 533 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms