RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ZFP14Q9HCL3 533 aa12.64□□□□□ -0.39
SSBP3-214ENST00000533209 TRPC7Q9HCX4 862 aa12.64□□□□□ -0.39
SSBP3-214ENST00000533209 NLRC4Q9NPP4 1024 aa12.64□□□□□ -0.39
SSBP3-214ENST00000533209 CHORDC1Q9UHD1 332 aaPredicted RBP12.64□□□□□ -0.39
SSBP3-214ENST00000533209 SCML2Q9UQR0 700 aa12.64□□□□□ -0.39
SSBP3-214ENST00000533209 GREB1Q4ZG55 1949 aa12.64□□□□□ -0.39
SSBP3-214ENST00000533209 PI4K2BG5E9Z4 385 aa12.63□□□□□ -0.39
SSBP3-214ENST00000533209 DLL1O00548 723 aa12.63□□□□□ -0.39
SSBP3-214ENST00000533209 GABBR2O75899 941 aa12.63□□□□□ -0.39
SSBP3-214ENST00000533209 OAS1P00973 400 aaKnown RBP12.63□□□□□ -0.39
SSBP3-214ENST00000533209 RGS7P49802 495 aa12.63□□□□□ -0.39
SSBP3-214ENST00000533209 TKTL1P51854 596 aa12.63□□□□□ -0.39
SSBP3-214ENST00000533209 UBASH3AP57075 661 aa12.63□□□□□ -0.39
SSBP3-214ENST00000533209 BPIFB4P59827 614 aa12.63□□□□□ -0.39
SSBP3-214ENST00000533209 PMF1Q6P1K2 205 aa12.63□□□□□ -0.39
SSBP3-214ENST00000533209 VITQ6UXI7 678 aa12.63□□□□□ -0.39
SSBP3-214ENST00000533209 CCDC186Q7Z3E2 898 aa12.63□□□□□ -0.39
SSBP3-214ENST00000533209 ARL14EPQ8N8R7 260 aaPredicted RBP12.63□□□□□ -0.39
SSBP3-214ENST00000533209 LRRC3BQ96PB8 259 aa12.63□□□□□ -0.39
SSBP3-214ENST00000533209 SMG9Q9H0W8 520 aaKnown RBP12.63□□□□□ -0.39
SSBP3-214ENST00000533209 PCDHGC3Q9UN70 934 aa12.63□□□□□ -0.39
SSBP3-214ENST00000533209 TRAV19A0A0A6YYK7 116 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 A0A1W2PQH9 124 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 HEPACAM2A8MVW5 462 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 NARSO43776 548 aaKnown RBP12.62□□□□□ -0.39
SSBP3-214ENST00000533209 GFPT2O94808 682 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 OLFM2O95897 454 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 ABL1P00519 1130 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 USP17L7P0C7H9 530 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 CYP11B1P15538 503 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 PFKLP17858 780 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 HDCP19113 662 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 SOX5P35711 763 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 AVPR1AP37288 418 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 PBX1P40424 430 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 RPL34P49207 117 aaKnown RBP12.62□□□□□ -0.39
SSBP3-214ENST00000533209 ZXDAP98168 799 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 ADIGQ0VDE8 80 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 ZNF268Q14587 947 aaPredicted RBP12.62□□□□□ -0.39
SSBP3-214ENST00000533209 PM20D1Q6GTS8 502 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 BHLHA9Q7RTU4 235 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 SCD5Q86SK9 330 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 STK32AQ8WU08 396 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 DDX1Q92499 740 aaKnown RBP12.62□□□□□ -0.39
SSBP3-214ENST00000533209 USP13Q92995 863 aaPredicted RBP12.62□□□□□ -0.39
SSBP3-214ENST00000533209 E2F7Q96AV8 911 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 HSFY1Q96LI6 401 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 SPAG5Q96R06 1193 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 ULBP1Q9BZM6 244 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 RNF38Q9H0F5 515 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 EPHX3Q9H6B9 360 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 CCSER2Q9H7U1 834 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 NMUR1Q9HB89 426 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 LRRC4Q9HBW1 653 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 TLR8Q9NR97 1041 aaKnown RBP12.62□□□□□ -0.39
SSBP3-214ENST00000533209 OSER1Q9NX31 292 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 OBP2AQ9NY56 170 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 IFNKQ9P0W0 207 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 CYTH4Q9UIA0 394 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 DUSP12Q9UNI6 340 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 CCL26Q9Y258 94 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 PATJQ8NI35 1801 aa12.62□□□□□ -0.39
SSBP3-214ENST00000533209 DPYSL4O14531 572 aa12.61□□□□□ -0.39
SSBP3-214ENST00000533209 COCHO43405 550 aa12.61□□□□□ -0.39
SSBP3-214ENST00000533209 ZBED1O96006 694 aa12.61□□□□□ -0.39
SSBP3-214ENST00000533209 CKMP06732 381 aa12.61□□□□□ -0.39
SSBP3-214ENST00000533209 SRFP11831 508 aa12.61□□□□□ -0.39
SSBP3-214ENST00000533209 ALADP13716 330 aa12.61□□□□□ -0.39
SSBP3-214ENST00000533209 KRT9P35527 623 aa12.61□□□□□ -0.39
SSBP3-214ENST00000533209 STAT1P42224 750 aa12.61□□□□□ -0.39
SSBP3-214ENST00000533209 TUBP50607 506 aa12.61□□□□□ -0.39
SSBP3-214ENST00000533209 PDE6CP51160 858 aa12.61□□□□□ -0.39
SSBP3-214ENST00000533209 GPC5P78333 572 aa12.61□□□□□ -0.39
SSBP3-214ENST00000533209 SLC7A9P82251 487 aa12.61□□□□□ -0.39
SSBP3-214ENST00000533209 GRM2Q14416 872 aa12.61□□□□□ -0.39
SSBP3-214ENST00000533209 HECTD3Q5T447 861 aa12.61□□□□□ -0.39
SSBP3-214ENST00000533209 NOP9Q86U38 636 aaKnown RBP12.61□□□□□ -0.39
SSBP3-214ENST00000533209 MFSD6LQ8IWD5 586 aa12.61□□□□□ -0.39
SSBP3-214ENST00000533209 UBALD2Q8IYN6 164 aa12.61□□□□□ -0.39
SSBP3-214ENST00000533209 SCML4Q8N228 414 aa12.61□□□□□ -0.39
SSBP3-214ENST00000533209 WDTC1Q8N5D0 677 aa12.61□□□□□ -0.39
SSBP3-214ENST00000533209 CELF5Q8N6W0 485 aaKnown RBP12.61□□□□□ -0.39
SSBP3-214ENST00000533209 RIN3Q8TB24 985 aa12.61□□□□□ -0.39
SSBP3-214ENST00000533209 EPS8L1Q8TE68 723 aa12.61□□□□□ -0.39
SSBP3-214ENST00000533209 DEPDC1BQ8WUY9 529 aa12.61□□□□□ -0.39
SSBP3-214ENST00000533209 BAP1Q92560 729 aa12.61□□□□□ -0.39
SSBP3-214ENST00000533209 NDRG1Q92597 394 aaKnown RBP12.61□□□□□ -0.39
SSBP3-214ENST00000533209 EDAQ92838 391 aa12.61□□□□□ -0.39
SSBP3-214ENST00000533209 XPO4Q9C0E2 1151 aaKnown RBP12.61□□□□□ -0.39
SSBP3-214ENST00000533209 TTYH3Q9C0H2 523 aa12.61□□□□□ -0.39
SSBP3-214ENST00000533209 LHX5Q9H2C1 402 aa12.61□□□□□ -0.39
SSBP3-214ENST00000533209 TDP1Q9NUW8 608 aa12.61□□□□□ -0.39
SSBP3-214ENST00000533209 NOCTQ9UK39 431 aaKnown RBP12.61□□□□□ -0.39
SSBP3-214ENST00000533209 MYO10Q9HD67 2058 aa12.61□□□□□ -0.39
SSBP3-214ENST00000533209 OBSL1O75147 1896 aa12.6□□□□□ -0.39
SSBP3-214ENST00000533209 PIK3R2O00459 728 aa12.6□□□□□ -0.39
SSBP3-214ENST00000533209 LCP1P13796 627 aa12.6□□□□□ -0.39
SSBP3-214ENST00000533209 TCF3P15923 654 aa12.6□□□□□ -0.39
SSBP3-214ENST00000533209 PSMC3P17980 439 aa12.6□□□□□ -0.39
SSBP3-214ENST00000533209 ZXDBP98169 803 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms