RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 SMARCE1Q969G3 411 aa24.84■■□□□ 1.57
SMPD1-209ENST00000533196 SMOQ99835 787 aa24.84■■□□□ 1.57
SMPD1-209ENST00000533196 APOBEC3GQ9HC16 384 aaKnown RBP24.84■■□□□ 1.57
SMPD1-209ENST00000533196 HMGXB4Q9UGU5 601 aa24.84■■□□□ 1.57
SMPD1-209ENST00000533196 RAB23Q9ULC3 237 aa24.84■■□□□ 1.57
SMPD1-209ENST00000533196 CCDC163A0A0D9SF12 145 aa24.83■■□□□ 1.57
SMPD1-209ENST00000533196 SLC16A3O15427 465 aaKnown RBP24.83■■□□□ 1.57
SMPD1-209ENST00000533196 MBL2P11226 248 aaPredicted RBP24.83■■□□□ 1.57
SMPD1-209ENST00000533196 CCDC130P13994 396 aa24.83■■□□□ 1.57
SMPD1-209ENST00000533196 MXI1P50539 228 aa24.83■■□□□ 1.57
SMPD1-209ENST00000533196 FBXL13Q8NEE6 735 aa24.83■■□□□ 1.57
SMPD1-209ENST00000533196 ZMIZ2Q8NF64 920 aa24.83■■□□□ 1.57
SMPD1-209ENST00000533196 SCAMP5Q8TAC9 235 aa24.83■■□□□ 1.57
SMPD1-209ENST00000533196 LINC00597Q9H2U6 94 aa24.83■■□□□ 1.57
SMPD1-209ENST00000533196 MMRN2Q9H8L6 949 aa24.83■■□□□ 1.57
SMPD1-209ENST00000533196 PCDHA5Q9Y5H7 936 aa24.83■■□□□ 1.57
SMPD1-209ENST00000533196 CILPO75339 1184 aa24.82■■□□□ 1.56
SMPD1-209ENST00000533196 EGFP01133 1207 aa24.82■■□□□ 1.56
SMPD1-209ENST00000533196 FAM200BP0CF97 657 aa24.82■■□□□ 1.56
SMPD1-209ENST00000533196 FKBP3Q00688 224 aaKnown RBP24.82■■□□□ 1.56
SMPD1-209ENST00000533196 LRRC63Q05C16 580 aa24.82■■□□□ 1.56
SMPD1-209ENST00000533196 ZC3H3Q8IXZ2 948 aaKnown RBP24.82■■□□□ 1.56
SMPD1-209ENST00000533196 KIAA2013Q8IYS2 634 aa24.82■■□□□ 1.56
SMPD1-209ENST00000533196 C12orf29Q8N999 325 aa24.82■■□□□ 1.56
SMPD1-209ENST00000533196 DUSP9Q99956 384 aaKnown RBP24.82■■□□□ 1.56
SMPD1-209ENST00000533196 PNPLA8Q9NP80 782 aa24.82■■□□□ 1.56
SMPD1-209ENST00000533196 FAM49BQ9NUQ9 324 aa24.82■■□□□ 1.56
SMPD1-209ENST00000533196 TBC1D14Q9P2M4 693 aa24.82■■□□□ 1.56
SMPD1-209ENST00000533196 GMEB2Q9UKD1 530 aa24.82■■□□□ 1.56
SMPD1-209ENST00000533196 MYO16Q9Y6X6 1858 aa24.82■■□□□ 1.56
SMPD1-209ENST00000533196 SPAG17Q6Q759 2223 aa24.81■■□□□ 1.56
SMPD1-209ENST00000533196 E2F8A0AVK6 867 aa24.81■■□□□ 1.56
SMPD1-209ENST00000533196 RNF40O75150 1001 aa24.81■■□□□ 1.56
SMPD1-209ENST00000533196 PPP1R2P41236 205 aa24.81■■□□□ 1.56
SMPD1-209ENST00000533196 FNTBP49356 437 aa24.81■■□□□ 1.56
SMPD1-209ENST00000533196 MAP3K7CLP57077 242 aa24.81■■□□□ 1.56
SMPD1-209ENST00000533196 ORC1Q13415 861 aa24.81■■□□□ 1.56
SMPD1-209ENST00000533196 LAIR1Q6GTX8 287 aa24.81■■□□□ 1.56
SMPD1-209ENST00000533196 FILIP1Q7Z7B0 1213 aa24.81■■□□□ 1.56
SMPD1-209ENST00000533196 WDR5BQ86VZ2 330 aa24.81■■□□□ 1.56
SMPD1-209ENST00000533196 ADGRG2Q8IZP9 1017 aa24.81■■□□□ 1.56
SMPD1-209ENST00000533196 DCLK2Q8N568 766 aa24.81■■□□□ 1.56
SMPD1-209ENST00000533196 OTUB2Q96DC9 234 aa24.81■■□□□ 1.56
SMPD1-209ENST00000533196 CYFIP2Q96F07 1278 aa24.81■■□□□ 1.56
SMPD1-209ENST00000533196 TWNKQ96RR1 684 aa24.81■■□□□ 1.56
SMPD1-209ENST00000533196 FBRSL1Q9HCM7 1045 aaKnown RBP24.81■■□□□ 1.56
SMPD1-209ENST00000533196 RAB20Q9NX57 234 aa24.81■■□□□ 1.56
SMPD1-209ENST00000533196 CHORDC1Q9UHD1 332 aaPredicted RBP24.81■■□□□ 1.56
SMPD1-209ENST00000533196 SLC8A2Q9UPR5 921 aa24.81■■□□□ 1.56
SMPD1-209ENST00000533196 KIAA1549LQ6ZVL6 1849 aa24.81■■□□□ 1.56
SMPD1-209ENST00000533196 WDR87Q6ZQQ6 2873 aa24.81■■□□□ 1.56
SMPD1-209ENST00000533196 CEP250Q9BV73 2442 aa24.81■■□□□ 1.56
SMPD1-209ENST00000533196 COCHO43405 550 aa24.8■■□□□ 1.56
SMPD1-209ENST00000533196 BEST1O76090 585 aa24.8■■□□□ 1.56
SMPD1-209ENST00000533196 ID4P47928 161 aa24.8■■□□□ 1.56
SMPD1-209ENST00000533196 CLEC20AQ6ZU45 233 aa24.8■■□□□ 1.56
SMPD1-209ENST00000533196 CAMKK1Q8N5S9 505 aa24.8■■□□□ 1.56
SMPD1-209ENST00000533196 TLR8Q9NR97 1041 aaKnown RBP24.8■■□□□ 1.56
SMPD1-209ENST00000533196 C2orf42Q9NWW7 574 aa24.8■■□□□ 1.56
SMPD1-209ENST00000533196 SMPD4Q9NXE4 827 aa24.8■■□□□ 1.56
SMPD1-209ENST00000533196 CFAP97Q9P2B7 532 aa24.8■■□□□ 1.56
SMPD1-209ENST00000533196 MYOFQ9NZM1 2061 aa24.8■■□□□ 1.56
SMPD1-209ENST00000533196 ADORA2BP29275 332 aa24.79■■□□□ 1.56
SMPD1-209ENST00000533196 DMWDQ09019 674 aa24.79■■□□□ 1.56
SMPD1-209ENST00000533196 STIM1Q13586 685 aa24.79■■□□□ 1.56
SMPD1-209ENST00000533196 SIM2Q14190 667 aaPredicted RBP24.79■■□□□ 1.56
SMPD1-209ENST00000533196 WHAMMQ8TF30 809 aa24.79■■□□□ 1.56
SMPD1-209ENST00000533196 ACDQ96AP0 544 aa24.79■■□□□ 1.56
SMPD1-209ENST00000533196 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.79■■□□□ 1.56
SMPD1-209ENST00000533196 GMIPQ9P107 970 aa24.79■■□□□ 1.56
SMPD1-209ENST00000533196 HRO43593 1189 aa24.78■■□□□ 1.56
SMPD1-209ENST00000533196 CYP17A1P05093 508 aa24.78■■□□□ 1.56
SMPD1-209ENST00000533196 CD58P19256 250 aa24.78■■□□□ 1.56
SMPD1-209ENST00000533196 EIF2DP41214 584 aaKnown RBP24.78■■□□□ 1.56
SMPD1-209ENST00000533196 FOXK2Q01167 660 aa24.78■■□□□ 1.56
SMPD1-209ENST00000533196 DHCR24Q15392 516 aa24.78■■□□□ 1.56
SMPD1-209ENST00000533196 ANKRD40Q6AI12 368 aa24.78■■□□□ 1.56
SMPD1-209ENST00000533196 PKN3Q6P5Z2 889 aa24.78■■□□□ 1.56
SMPD1-209ENST00000533196 SEMA4DQ92854 862 aa24.78■■□□□ 1.56
SMPD1-209ENST00000533196 EEF2KMTQ96G04 330 aa24.78■■□□□ 1.56
SMPD1-209ENST00000533196 ZFRQ96KR1 1074 aaKnown RBP24.78■■□□□ 1.56
SMPD1-209ENST00000533196 SCML2Q9UQR0 700 aa24.78■■□□□ 1.56
SMPD1-209ENST00000533196 COQ4Q9Y3A0 265 aa24.78■■□□□ 1.56
SMPD1-209ENST00000533196 RALGAPA1Q6GYQ0 2036 aa24.78■■□□□ 1.56
SMPD1-209ENST00000533196 PSMA7O14818 248 aa24.77■■□□□ 1.56
SMPD1-209ENST00000533196 ADH1CP00326 375 aa24.77■■□□□ 1.56
SMPD1-209ENST00000533196 RETP07949 1114 aa24.77■■□□□ 1.56
SMPD1-209ENST00000533196 OPRD1P41143 372 aa24.77■■□□□ 1.56
SMPD1-209ENST00000533196 NAIF1Q69YI7 327 aaPredicted RBP24.77■■□□□ 1.56
SMPD1-209ENST00000533196 HEATR6Q6AI08 1181 aaKnown RBP24.77■■□□□ 1.56
SMPD1-209ENST00000533196 PRR23BQ6ZRT6 265 aa24.77■■□□□ 1.56
SMPD1-209ENST00000533196 SYT13Q7L8C5 426 aa24.77■■□□□ 1.56
SMPD1-209ENST00000533196 DHTKD1Q96HY7 919 aaPredicted RBP24.77■■□□□ 1.56
SMPD1-209ENST00000533196 NACA2Q9H009 215 aa24.77■■□□□ 1.56
SMPD1-209ENST00000533196 CCSER2Q9H7U1 834 aa24.77■■□□□ 1.56
SMPD1-209ENST00000533196 SH3BP1Q9Y3L3 701 aa24.77■■□□□ 1.56
SMPD1-209ENST00000533196 HHLA1C9JL84 531 aa24.76■■□□□ 1.55
SMPD1-209ENST00000533196 TLR5O60602 858 aa24.76■■□□□ 1.55
SMPD1-209ENST00000533196 LRP3O75074 770 aa24.76■■□□□ 1.55
SMPD1-209ENST00000533196 GAB4Q2WGN9 574 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms