RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 CAMK1GQ96NX5 476 aa12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 TSG101Q99816 390 aa12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 SRRTQ9BXP5 876 aaKnown RBP12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 ST6GALNAC4Q9H4F1 302 aa12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 TMEM134Q9H6X4 195 aa12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 PLEKHA5Q9HAU0 1116 aa12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 KMT5AQ9NQR1 393 aa12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 FSCN3Q9NQT6 498 aa12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 KIAA1522Q9P206 1035 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 KCNG1Q9UIX4 513 aa12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 RAI2Q9Y5P3 530 aa12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 KIAA1549LQ6ZVL6 1849 aa12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 SMG1Q96Q15 3661 aaKnown RBP12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 K7ENM7 598 aa12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 ATXN7O15265 892 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 PPP1R37O75864 691 aa12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 C1QL1O75973 258 aa12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 F11P03951 625 aa12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 ODC1P11926 461 aa12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 ZNF18P17022 549 aa12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 CYP3A5P20815 502 aa12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 CDK11BP21127 795 aaKnown RBP12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 PROZP22891 400 aa12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 NCKAP1LP55160 1127 aa12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 GTF2BQ00403 316 aa12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 KCNA1Q09470 495 aa12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 DMP1Q13316 513 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 ALCAMQ13740 583 aa12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 EML3Q32P44 896 aa12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 SLC39A12Q504Y0 691 aa12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 HSP90AA4PQ58FG1 418 aa12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 EOGTQ5NDL2 527 aa12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 TMEM92Q6UXU6 159 aa12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 SLC36A4Q6YBV0 504 aa12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 GLRX5Q86SX6 157 aa12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 NAXDQ8IW45 347 aa12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 CSGALNACT2Q8N6G5 542 aa12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 FRMD1Q8N878 549 aa12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 TMEM161BQ8NDZ6 487 aa12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 RIN3Q8TB24 985 aa12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 GIPC2Q8TF65 315 aa12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 NOC3LQ8WTT2 800 aaKnown RBP12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 TARS2Q9BW92 718 aaKnown RBP12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 KCTD10Q9H3F6 313 aa12.08□□□□□ -0.48
TRAPPC4-213ENST00000533149 TNRC6BQ9UPQ9 1833 aaKnown RBP12.07□□□□□ -0.48
TRAPPC4-213ENST00000533149 ABLIM1O14639 778 aa12.07□□□□□ -0.48
TRAPPC4-213ENST00000533149 XPOTO43592 962 aaKnown RBP12.07□□□□□ -0.48
TRAPPC4-213ENST00000533149 NFATC1O95644 943 aa12.07□□□□□ -0.48
TRAPPC4-213ENST00000533149 HARSP12081 509 aaKnown RBP12.07□□□□□ -0.48
TRAPPC4-213ENST00000533149 ATP1A3P13637 1013 aa12.07□□□□□ -0.48
TRAPPC4-213ENST00000533149 ABCG1P45844 678 aa12.07□□□□□ -0.48
TRAPPC4-213ENST00000533149 FANCCQ00597 558 aa12.07□□□□□ -0.48
TRAPPC4-213ENST00000533149 RPL6Q02878 288 aaKnown RBP12.07□□□□□ -0.48
TRAPPC4-213ENST00000533149 LRRC63Q05C16 580 aa12.07□□□□□ -0.48
TRAPPC4-213ENST00000533149 ZCWPW2Q504Y3 356 aa12.07□□□□□ -0.48
TRAPPC4-213ENST00000533149 CDKAL1Q5VV42 579 aa12.07□□□□□ -0.48
TRAPPC4-213ENST00000533149 FOXR2Q6PJQ5 311 aa12.07□□□□□ -0.48
TRAPPC4-213ENST00000533149 SARM1Q6SZW1 724 aa12.07□□□□□ -0.48
TRAPPC4-213ENST00000533149 TMPRSS7Q7RTY8 843 aa12.07□□□□□ -0.48
TRAPPC4-213ENST00000533149 IRF2BP1Q8IU81 584 aa12.07□□□□□ -0.48
TRAPPC4-213ENST00000533149 PGBD3Q8N328 593 aa12.07□□□□□ -0.48
TRAPPC4-213ENST00000533149 OR2I1PQ8NGU4 316 aa12.07□□□□□ -0.48
TRAPPC4-213ENST00000533149 SPPL2BQ8TCT7 592 aa12.07□□□□□ -0.48
TRAPPC4-213ENST00000533149 ANP32BQ92688 251 aaKnown RBP12.07□□□□□ -0.48
TRAPPC4-213ENST00000533149 ACCSQ96QU6 501 aa12.07□□□□□ -0.48
TRAPPC4-213ENST00000533149 ZCWPW1Q9H0M4 648 aa12.07□□□□□ -0.48
TRAPPC4-213ENST00000533149 THAP9Q9H5L6 903 aa12.07□□□□□ -0.48
TRAPPC4-213ENST00000533149 UBQLN1Q9UMX0 589 aaKnown RBP12.07□□□□□ -0.48
TRAPPC4-213ENST00000533149 WNT6Q9Y6F9 365 aa12.07□□□□□ -0.48
TRAPPC4-213ENST00000533149 PI4KAP42356 2102 aa12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 MYO16Q9Y6X6 1858 aa12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 PLXNB3Q9ULL4 1909 aa12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 ACACAQ13085 2346 aa12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 CAPN8A6NHC0 703 aa12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 H0YCG3 227 aa12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 PDXKO00764 312 aa12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 TGFB1I1O43294 461 aa12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 GJB3O75712 270 aa12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 ADCY5O95622 1261 aa12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 FGFR1OPO95684 399 aaKnown RBP12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 USP17L7P0C7H9 530 aa12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 HAPLN1P10915 354 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 HMGA1P17096 107 aaKnown RBP12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 DEKP35659 375 aaKnown RBP12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 ZNF33AQ06730 810 aa12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 CYP4F3Q08477 520 aa12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 ZNF77Q15935 545 aa12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 EFCAB13Q8IY85 973 aa12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 SYCP3Q8IZU3 236 aa12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 ALLCQ8N6M5 410 aa12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 TXNDC5Q8NBS9 432 aaKnown RBP12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 TTC16Q8NEE8 873 aa12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 OR10T2Q8NGX3 314 aa12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 HMGB4Q8WW32 186 aa12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 HVCN1Q96D96 273 aa12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 TRIM5Q9C035 493 aa12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 IKZF4Q9H2S9 585 aa12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 TMEM206Q9H813 350 aa12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 UXTQ9UBK9 157 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC4-213ENST00000533149 DSEQ9UL01 958 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms